| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is cphA [H]
Identifier: 124266215
GI number: 124266215
Start: 1089337
End: 1091604
Strand: Direct
Name: cphA [H]
Synonym: Mpe_A1022
Alternate gene names: 124266215
Gene position: 1089337-1091604 (Clockwise)
Preceding gene: 124266212
Following gene: 124266216
Centisome position: 26.94
GC content: 71.96
Gene sequence:
>2268_bases GTGCCGCATGGAATGCGGCCCGGAGCGTGGTGCCAAGGAGCCGGTCGGGCGCACAATCGTGCGTCGGTCCTGGGCTGCCC GGGCGCCTCGTCCCCGCCGAAAATGAGCAAGAAAAACGACCTGCAACTGCTCCGCATCAATTACCTGCGCGGCCCCAACA TCTGGACCTACCGTCCGGTGCTGGAAACCTGGCTCGACCTCGGCGAGCTCGAAGACCACCCCTCCCATCTGTTGCCCGGC TTCAACGAGCGCCTGTGCGCGCTGCTGCCGGCGCTCGAGGAGCACCACTGCGGCGTGGGCGAGCGGGGCGGGTTCCTGCA GCGCCTGCGGGAGGGCACCTGGTGCGGCCACGTGCTGGAGCACGTGGTCATCGAGCTCCTCAACCTGGCGGGCATGCCCA CCGGTTTCGGCCAGACTCGCAGCACGTCGCAGCGGGGTGTCTACCGGATGGTGTTTCGCGCCCGCGAGGAGCAGGTCGCG CGCGCGGCGCTGGCCGAAGGCCACCGGCTGCTGATGGCCGCCATCAACGATGAGGCCTTCGATGTCGCTGCGGCCGTGGC CCGCGTGCGCGAGCAGGTCGACGACACCTATTTCGGGCCCAGCACCGCCGCCATCGTCGGCGCCGCCACCGAACGTGGCA TCCCGCACATCCGCCTCAATGACGGCAACCTGGTGCAGCTCGGCCACGGTGCCCGCCAGCGCCGCATCTGGACCGCCGAG ACCGACCGCACCAGCGCCATCGCCGAGGGCATCGCCGGCGACAAGGACCTGACCAAGCGTCTGCTCAAGTCCTGCGGCGT GCCGGTGCCGGAGGGTGAGGTCGTCGACAGCGTCGAGGCCGCCTGGGAGGCGGCGCAGGACATCGGCCTGCCGGTGGCAC TGAAGCCGACCGACGGCAACCACGGCCGCGGCGTCACGCTGGACCTGACCAGCCGCGAGGACATCGAGGCCGCGTATGCC TATGCCGACCTGCACGGCAGCGAGGTCATGGTCGAGCGCCACGTGCCCGGCCAGGAGCACCGCCTGCTGGTGGTGGGCGG CCGGGTGGTGGCCGCAGCGCGCGGCGAGACCGCCTGGGTCACCGGTGACGGCCGTTCCACGGTGAGTGAGCTGGTCGACG CCCAGATCAACACCGACCCGAGGCGCGGCGAGACCGAGGACTTCCCGCTCGGCCTGATCGAGACCGACAAGGACGGCGCG GTGCTGTCCGACCTGCAGCGCCAGGGGCTCGCGCCCGATGCGGTGCCGGCCAGCGGCCGCCGCGTGCTGATCCAGCGCAA CGGCAACGTCGCGATCGACTGCAGCGACCAGGTCCACCCCGAGGTCGACCACATCGTGTCGCTCGCCGCGCGCGTGGTGG GCCTGGACATCGCCGGCGTCGACGTCGTGGCCGAGGACATCTCGCGCCCGCTGGCCGAGCAGGGCGGCGCGATCGTCGAG GTCAACGCCGGCCCCGGGCTGCTGATGCACCTGCGGCCGGCCGAGGGCATGCCGCGGCCGGTCGGCCAAGCCATCATCGA CCACCTGTTCGCCGAAACGGAAAGCGGGCGCATTCCCATCGTCGGCGTGGCCGGGACCCGAGGCACCCACACCATCGCCC GGCTGGTGGCCTGGCTGGTGCACCTGAGCGGCCGCCACGTCGGGCTGGCCTGCCGCGACGGCCTGTTCCTCGGCGGACGC CGGATCGAGCACGGCGACTGCGCGCACTGGGAAGCCAGCCACCGGCTGCTGATCAACCGGCAGGTGGAGGTGGCGGTGGT GGAGAACGGCGCCGAGGCCATCCTGCGCGACGGCCTCGCCTACGACCGCTGCCAGGTCGGCGTCGTCACCGACCTCGACG GCGCCGCGGCGCTGACGGCGTTCGACATTCGCGAATCCGACCAGATGCTCAAGGTGCTGCGCACCCAGGTCGACGTGGTA CTGCCGGACGGCGTGGCGGTGCTCAATGCCGACGACGAGCGGGTGGCCGAACTGGCCGGCCTGTGCGACGGCGAGGTGAT CCTCTACGGCGTCGACGCAGCCACACCGGTCCTGCAGGCGCAGCGCGCCCAGGGCGGGCGAGCCGTGTTCCTGCGCCACG GCCGCGCGATCCTGGCCACCGGCGGGGTCGAGACGCAGGGACCCGAATTCACCCGTGGCCGCATGGCCGAGGTGCCGCCG GAGACCATGCTGGCGGCCATCGCCGCCGCCTGGGCGCTGGGGATCGCGCCCGAACTGGCGGCCGCCGGCATCGAGACCTT CCAGCTCGAACCGAAGACCACGCACTGA
Upstream 100 bases:
>100_bases ACTGGATGGTGATGATGCATTCTGATTTGTTCTCGAAGACCCACAAGGCGGCCCTCAATCCCTCGGAAGGGCCCGAGATT CTGACCGATGCCGGGTTGGC
Downstream 100 bases:
>100_bases GCCCCGCCGGGGCCCCGACAATCGACGCGAACGGCGATCTGCCCGAACCACCCGAAGAGCAGCAGCGATGGAAGTTTCCC GCATCCGTGCCTTGCGCGGC
Product: cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MPHGMRPGAWCQGAGRAHNRASVLGCPGASSPPKMSKKNDLQLLRINYLRGPNIWTYRPVLETWLDLGELEDHPSHLLPG FNERLCALLPALEEHHCGVGERGGFLQRLREGTWCGHVLEHVVIELLNLAGMPTGFGQTRSTSQRGVYRMVFRAREEQVA RAALAEGHRLLMAAINDEAFDVAAAVARVREQVDDTYFGPSTAAIVGAATERGIPHIRLNDGNLVQLGHGARQRRIWTAE TDRTSAIAEGIAGDKDLTKRLLKSCGVPVPEGEVVDSVEAAWEAAQDIGLPVALKPTDGNHGRGVTLDLTSREDIEAAYA YADLHGSEVMVERHVPGQEHRLLVVGGRVVAAARGETAWVTGDGRSTVSELVDAQINTDPRRGETEDFPLGLIETDKDGA VLSDLQRQGLAPDAVPASGRRVLIQRNGNVAIDCSDQVHPEVDHIVSLAARVVGLDIAGVDVVAEDISRPLAEQGGAIVE VNAGPGLLMHLRPAEGMPRPVGQAIIDHLFAETESGRIPIVGVAGTRGTHTIARLVAWLVHLSGRHVGLACRDGLFLGGR RIEHGDCAHWEASHRLLINRQVEVAVVENGAEAILRDGLAYDRCQVGVVTDLDGAAALTAFDIRESDQMLKVLRTQVDVV LPDGVAVLNADDERVAELAGLCDGEVILYGVDAATPVLQAQRAQGGRAVFLRHGRAILATGGVETQGPEFTRGRMAEVPP ETMLAAIAAAWALGIAPELAAAGIETFQLEPKTTH
Sequences:
>Translated_755_residues MPHGMRPGAWCQGAGRAHNRASVLGCPGASSPPKMSKKNDLQLLRINYLRGPNIWTYRPVLETWLDLGELEDHPSHLLPG FNERLCALLPALEEHHCGVGERGGFLQRLREGTWCGHVLEHVVIELLNLAGMPTGFGQTRSTSQRGVYRMVFRAREEQVA RAALAEGHRLLMAAINDEAFDVAAAVARVREQVDDTYFGPSTAAIVGAATERGIPHIRLNDGNLVQLGHGARQRRIWTAE TDRTSAIAEGIAGDKDLTKRLLKSCGVPVPEGEVVDSVEAAWEAAQDIGLPVALKPTDGNHGRGVTLDLTSREDIEAAYA YADLHGSEVMVERHVPGQEHRLLVVGGRVVAAARGETAWVTGDGRSTVSELVDAQINTDPRRGETEDFPLGLIETDKDGA VLSDLQRQGLAPDAVPASGRRVLIQRNGNVAIDCSDQVHPEVDHIVSLAARVVGLDIAGVDVVAEDISRPLAEQGGAIVE VNAGPGLLMHLRPAEGMPRPVGQAIIDHLFAETESGRIPIVGVAGTRGTHTIARLVAWLVHLSGRHVGLACRDGLFLGGR RIEHGDCAHWEASHRLLINRQVEVAVVENGAEAILRDGLAYDRCQVGVVTDLDGAAALTAFDIRESDQMLKVLRTQVDVV LPDGVAVLNADDERVAELAGLCDGEVILYGVDAATPVLQAQRAQGGRAVFLRHGRAILATGGVETQGPEFTRGRMAEVPP ETMLAAIAAAWALGIAPELAAAGIETFQLEPKTTH >Mature_754_residues PHGMRPGAWCQGAGRAHNRASVLGCPGASSPPKMSKKNDLQLLRINYLRGPNIWTYRPVLETWLDLGELEDHPSHLLPGF NERLCALLPALEEHHCGVGERGGFLQRLREGTWCGHVLEHVVIELLNLAGMPTGFGQTRSTSQRGVYRMVFRAREEQVAR AALAEGHRLLMAAINDEAFDVAAAVARVREQVDDTYFGPSTAAIVGAATERGIPHIRLNDGNLVQLGHGARQRRIWTAET DRTSAIAEGIAGDKDLTKRLLKSCGVPVPEGEVVDSVEAAWEAAQDIGLPVALKPTDGNHGRGVTLDLTSREDIEAAYAY ADLHGSEVMVERHVPGQEHRLLVVGGRVVAAARGETAWVTGDGRSTVSELVDAQINTDPRRGETEDFPLGLIETDKDGAV LSDLQRQGLAPDAVPASGRRVLIQRNGNVAIDCSDQVHPEVDHIVSLAARVVGLDIAGVDVVAEDISRPLAEQGGAIVEV NAGPGLLMHLRPAEGMPRPVGQAIIDHLFAETESGRIPIVGVAGTRGTHTIARLVAWLVHLSGRHVGLACRDGLFLGGRR IEHGDCAHWEASHRLLINRQVEVAVVENGAEAILRDGLAYDRCQVGVVTDLDGAAALTAFDIRESDQMLKVLRTQVDVVL PDGVAVLNADDERVAELAGLCDGEVILYGVDAATPVLQAQRAQGGRAVFLRHGRAILATGGVETQGPEFTRGRMAEVPPE TMLAAIAAAWALGIAPELAAAGIETFQLEPKTTH
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 80813; Mature: 80682
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHGMRPGAWCQGAGRAHNRASVLGCPGASSPPKMSKKNDLQLLRINYLRGPNIWTYRPV CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHH LETWLDLGELEDHPSHLLPGFNERLCALLPALEEHHCGVGERGGFLQRLREGTWCGHVLE HHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHH HVVIELLNLAGMPTGFGQTRSTSQRGVYRMVFRAREEQVARAALAEGHRLLMAAINDEAF HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHH DVAAAVARVREQVDDTYFGPSTAAIVGAATERGIPHIRLNDGNLVQLGHGARQRRIWTAE HHHHHHHHHHHHHCCCCCCCCHHHEEECHHHCCCCEEEECCCCEEEECCCCCCCEEEECC TDRTSAIAEGIAGDKDLTKRLLKSCGVPVPEGEVVDSVEAAWEAAQDIGLPVALKPTDGN CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC HGRGVTLDLTSREDIEAAYAYADLHGSEVMVERHVPGQEHRLLVVGGRVVAAARGETAWV CCCEEEEEECCCCCHHHHHEEEECCCCEEEEEECCCCCCCEEEEECCEEEEEECCCEEEE TGDGRSTVSELVDAQINTDPRRGETEDFPLGLIETDKDGAVLSDLQRQGLAPDAVPASGR ECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC RVLIQRNGNVAIDCSDQVHPEVDHIVSLAARVVGLDIAGVDVVAEDISRPLAEQGGAIVE EEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEE VNAGPGLLMHLRPAEGMPRPVGQAIIDHLFAETESGRIPIVGVAGTRGTHTIARLVAWLV EECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH HLSGRHVGLACRDGLFLGGRRIEHGDCAHWEASHRLLINRQVEVAVVENGAEAILRDGLA HHCCCEEEEEECCCEEECCEEECCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHCCCC YDRCQVGVVTDLDGAAALTAFDIRESDQMLKVLRTQVDVVLPDGVAVLNADDERVAELAG CCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCEECCCCEEEECCCHHHHHHHHC LCDGEVILYGVDAATPVLQAQRAQGGRAVFLRHGRAILATGGVETQGPEFTRGRMAEVPP CCCCCEEEEECCCCCHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCH ETMLAAIAAAWALGIAPELAAAGIETFQLEPKTTH HHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCC >Mature Secondary Structure PHGMRPGAWCQGAGRAHNRASVLGCPGASSPPKMSKKNDLQLLRINYLRGPNIWTYRPV CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHH LETWLDLGELEDHPSHLLPGFNERLCALLPALEEHHCGVGERGGFLQRLREGTWCGHVLE HHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHH HVVIELLNLAGMPTGFGQTRSTSQRGVYRMVFRAREEQVARAALAEGHRLLMAAINDEAF HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHH DVAAAVARVREQVDDTYFGPSTAAIVGAATERGIPHIRLNDGNLVQLGHGARQRRIWTAE HHHHHHHHHHHHHCCCCCCCCHHHEEECHHHCCCCEEEECCCCEEEECCCCCCCEEEECC TDRTSAIAEGIAGDKDLTKRLLKSCGVPVPEGEVVDSVEAAWEAAQDIGLPVALKPTDGN CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC HGRGVTLDLTSREDIEAAYAYADLHGSEVMVERHVPGQEHRLLVVGGRVVAAARGETAWV CCCEEEEEECCCCCHHHHHEEEECCCCEEEEEECCCCCCCEEEEECCEEEEEECCCEEEE TGDGRSTVSELVDAQINTDPRRGETEDFPLGLIETDKDGAVLSDLQRQGLAPDAVPASGR ECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC RVLIQRNGNVAIDCSDQVHPEVDHIVSLAARVVGLDIAGVDVVAEDISRPLAEQGGAIVE EEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEE VNAGPGLLMHLRPAEGMPRPVGQAIIDHLFAETESGRIPIVGVAGTRGTHTIARLVAWLV EECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH HLSGRHVGLACRDGLFLGGRRIEHGDCAHWEASHRLLINRQVEVAVVENGAEAILRDGLA HHCCCEEEEEECCCEEECCEEECCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHCCCC YDRCQVGVVTDLDGAAALTAFDIRESDQMLKVLRTQVDVVLPDGVAVLNADDERVAELAG CCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCEECCCCEEEECCCHHHHHHHHC LCDGEVILYGVDAATPVLQAQRAQGGRAVFLRHGRAILATGGVETQGPEFTRGRMAEVPP CCCCCEEEEECCCCCHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCH ETMLAAIAAAWALGIAPELAAAGIETFQLEPKTTH HHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9652408 [H]