Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124266213

Identifier: 124266213

GI number: 124266213

Start: 1086456

End: 1086929

Strand: Reverse

Name: 124266213

Synonym: Mpe_A1020

Alternate gene names: NA

Gene position: 1086929-1086456 (Counterclockwise)

Preceding gene: 124266214

Following gene: 124266206

Centisome position: 26.88

GC content: 70.89

Gene sequence:

>474_bases
ATGGACGAGAACCGCGACCTCCGGCTCGAACGCAACGCCTTCGGTCGCCTGGTCCTCACGGCCGCGGACGGTGCGGTGCA
CGACGGCGTGCTGCCGGTGCGCGCCTTCCCGATCGCCGCGCCCGACGAAGGCGTGTCGATCGTCGGCGCCGACGGGCGCG
AACTGCACTGGATCGAGCGCCTGAGCGCCCTGCCACCGTCCCCGCGCGCCCTGCTGGAGGCGGAGCTCGCCAGCCGCGAG
TTCATGCCGACCATCCTGCAGATCAGCGCCGTGTCGACCTTCTCGACGCCCAGCAGCTGGACGGTCGAGACCGACCGCGG
CAGCACGAGCTTCGTGCTCAAGGGCGAGGAGGACATCCGCCGGCTCGGCAACGGCGCGCTGCTGATCGTCGACAGCCACG
GCATCCAGTTCCTGGTGCGCGACCGCCTGGCGCTGGACCGGCGCTCGAAGAAGCTGCTGGAGCGCTTTCTCTAG

Upstream 100 bases:

>100_bases
TCGAAGGCGACGACGGCGAGGCGGCGCTGGACCAGCCTTCGCCGTCGACACTGTCGCCGTCGGCCCACCCGACCGAACTC
GCATGAACGGAGCGCCCGCG

Downstream 100 bases:

>100_bases
GACCGGTTGACGCCGCCGGTCACGGCATGCCGTGACAGCAGCGACGGCGCCGTGACGCGATTGCGACCCTCGCGCTTGGA
GGCGTAGAGCGCCTCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIERLSALPPSPRALLEAELASRE
FMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIRRLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL

Sequences:

>Translated_157_residues
MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIERLSALPPSPRALLEAELASRE
FMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIRRLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL
>Mature_157_residues
MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIERLSALPPSPRALLEAELASRE
FMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIRRLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL

Specific function: Unknown

COG id: COG1132

COG function: function code V; ABC-type multidrug transport system, ATPase and permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17344; Mature: 17344

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIER
CCCCCCEEEECCCCCEEEEEECCCCCCCCEECEEEEECCCCCCCEEEEECCCCCHHHHHH
LSALPPSPRALLEAELASREFMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIR
HHCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCEEEECCCCCEEEEEECHHHHH
RLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL
HHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIER
CCCCCCEEEECCCCCEEEEEECCCCCCCCEECEEEEECCCCCCCEEEEECCCCCHHHHHH
LSALPPSPRALLEAELASREFMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIR
HHCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCEEEECCCCCEEEEEECHHHHH
RLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL
HHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA