| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266213
Identifier: 124266213
GI number: 124266213
Start: 1086456
End: 1086929
Strand: Reverse
Name: 124266213
Synonym: Mpe_A1020
Alternate gene names: NA
Gene position: 1086929-1086456 (Counterclockwise)
Preceding gene: 124266214
Following gene: 124266206
Centisome position: 26.88
GC content: 70.89
Gene sequence:
>474_bases ATGGACGAGAACCGCGACCTCCGGCTCGAACGCAACGCCTTCGGTCGCCTGGTCCTCACGGCCGCGGACGGTGCGGTGCA CGACGGCGTGCTGCCGGTGCGCGCCTTCCCGATCGCCGCGCCCGACGAAGGCGTGTCGATCGTCGGCGCCGACGGGCGCG AACTGCACTGGATCGAGCGCCTGAGCGCCCTGCCACCGTCCCCGCGCGCCCTGCTGGAGGCGGAGCTCGCCAGCCGCGAG TTCATGCCGACCATCCTGCAGATCAGCGCCGTGTCGACCTTCTCGACGCCCAGCAGCTGGACGGTCGAGACCGACCGCGG CAGCACGAGCTTCGTGCTCAAGGGCGAGGAGGACATCCGCCGGCTCGGCAACGGCGCGCTGCTGATCGTCGACAGCCACG GCATCCAGTTCCTGGTGCGCGACCGCCTGGCGCTGGACCGGCGCTCGAAGAAGCTGCTGGAGCGCTTTCTCTAG
Upstream 100 bases:
>100_bases TCGAAGGCGACGACGGCGAGGCGGCGCTGGACCAGCCTTCGCCGTCGACACTGTCGCCGTCGGCCCACCCGACCGAACTC GCATGAACGGAGCGCCCGCG
Downstream 100 bases:
>100_bases GACCGGTTGACGCCGCCGGTCACGGCATGCCGTGACAGCAGCGACGGCGCCGTGACGCGATTGCGACCCTCGCGCTTGGA GGCGTAGAGCGCCTCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIERLSALPPSPRALLEAELASRE FMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIRRLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL
Sequences:
>Translated_157_residues MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIERLSALPPSPRALLEAELASRE FMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIRRLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL >Mature_157_residues MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIERLSALPPSPRALLEAELASRE FMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIRRLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL
Specific function: Unknown
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17344; Mature: 17344
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIER CCCCCCEEEECCCCCEEEEEECCCCCCCCEECEEEEECCCCCCCEEEEECCCCCHHHHHH LSALPPSPRALLEAELASREFMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIR HHCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCEEEECCCCCEEEEEECHHHHH RLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL HHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDENRDLRLERNAFGRLVLTAADGAVHDGVLPVRAFPIAAPDEGVSIVGADGRELHWIER CCCCCCEEEECCCCCEEEEEECCCCCCCCEECEEEEECCCCCCCEEEEECCCCCHHHHHH LSALPPSPRALLEAELASREFMPTILQISAVSTFSTPSSWTVETDRGSTSFVLKGEEDIR HHCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCEEEECCCCCEEEEEECHHHHH RLGNGALLIVDSHGIQFLVRDRLALDRRSKKLLERFL HHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA