| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266199
Identifier: 124266199
GI number: 124266199
Start: 1069539
End: 1069907
Strand: Direct
Name: 124266199
Synonym: Mpe_A1006
Alternate gene names: NA
Gene position: 1069539-1069907 (Clockwise)
Preceding gene: 124266197
Following gene: 124266200
Centisome position: 26.45
GC content: 66.12
Gene sequence:
>369_bases ATGGCAACGGAATCGAGAGATCTGGTGGTGGTGATCACGCATGGCATCGACCACGAGCTGTCCTCGGCAGGCATGGTCAT CGCGCTCGGCGGCATGACGGCCGGCCTGAAGGTGTCGATCTTTCTCACCAGTTCGGGTGTCGACATCGTGCGGCGCGGTG CGTCGGACACGACCCACGTGAAGCCGCTCGAACCGCTGGCGGACATGCTGCGCGACTTCGTCGCGCGAGGCGGCACGCTG TGGGCCTGCACGCCGTGCGTGAAGAGCCGCGGCTATGCCCAGGAGCAGCTGATCGAAGGCGTGGTGATCGCCGGCTCCAG CGTGATGCACGAGCTGATCAAGCGCGGCGCGGCCACGCTGAGCTTCTGA
Upstream 100 bases:
>100_bases CGGCGGCGTTTCGGGCAAGACGGGCGGCATTTCGGTCATGGCTTCCTCGGGGCGATCGACCTAAGCTGACGTCATCAAGG ATGCAGCAAGGAGGCTGTCA
Downstream 100 bases:
>100_bases GCCGATGTTGATGTGCGAGCAGCAGGAGGCCGCCGTGATGCTGATGTACCGGGAACTGAGCTGGTGGTACTGGGCCGTGA CGGCGGCGCTGCTGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHVKPLEPLADMLRDFVARGGTL WACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATLSF
Sequences:
>Translated_122_residues MATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHVKPLEPLADMLRDFVARGGTL WACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATLSF >Mature_121_residues ATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHVKPLEPLADMLRDFVARGGTLW ACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATLSF
Specific function: Unknown
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12853; Mature: 12722
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHV CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHCCCCCCCCC KPLEPLADMLRDFVARGGTLWACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATL CCHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHCCCEEECHHHHHHHHHCCCCCC SF CC >Mature Secondary Structure ATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHV CCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHCCCCCCCCC KPLEPLADMLRDFVARGGTLWACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATL CCHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHCCCEEECHHHHHHHHHCCCCCC SF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA