Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124266199

Identifier: 124266199

GI number: 124266199

Start: 1069539

End: 1069907

Strand: Direct

Name: 124266199

Synonym: Mpe_A1006

Alternate gene names: NA

Gene position: 1069539-1069907 (Clockwise)

Preceding gene: 124266197

Following gene: 124266200

Centisome position: 26.45

GC content: 66.12

Gene sequence:

>369_bases
ATGGCAACGGAATCGAGAGATCTGGTGGTGGTGATCACGCATGGCATCGACCACGAGCTGTCCTCGGCAGGCATGGTCAT
CGCGCTCGGCGGCATGACGGCCGGCCTGAAGGTGTCGATCTTTCTCACCAGTTCGGGTGTCGACATCGTGCGGCGCGGTG
CGTCGGACACGACCCACGTGAAGCCGCTCGAACCGCTGGCGGACATGCTGCGCGACTTCGTCGCGCGAGGCGGCACGCTG
TGGGCCTGCACGCCGTGCGTGAAGAGCCGCGGCTATGCCCAGGAGCAGCTGATCGAAGGCGTGGTGATCGCCGGCTCCAG
CGTGATGCACGAGCTGATCAAGCGCGGCGCGGCCACGCTGAGCTTCTGA

Upstream 100 bases:

>100_bases
CGGCGGCGTTTCGGGCAAGACGGGCGGCATTTCGGTCATGGCTTCCTCGGGGCGATCGACCTAAGCTGACGTCATCAAGG
ATGCAGCAAGGAGGCTGTCA

Downstream 100 bases:

>100_bases
GCCGATGTTGATGTGCGAGCAGCAGGAGGCCGCCGTGATGCTGATGTACCGGGAACTGAGCTGGTGGTACTGGGCCGTGA
CGGCGGCGCTGCTGATCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHVKPLEPLADMLRDFVARGGTL
WACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATLSF

Sequences:

>Translated_122_residues
MATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHVKPLEPLADMLRDFVARGGTL
WACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATLSF
>Mature_121_residues
ATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHVKPLEPLADMLRDFVARGGTLW
ACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATLSF

Specific function: Unknown

COG id: COG1553

COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12853; Mature: 12722

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHV
CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHCCCCCCCCC
KPLEPLADMLRDFVARGGTLWACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATL
CCHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHCCCEEECHHHHHHHHHCCCCCC
SF
CC
>Mature Secondary Structure 
ATESRDLVVVITHGIDHELSSAGMVIALGGMTAGLKVSIFLTSSGVDIVRRGASDTTHV
CCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHCCCCCCCCC
KPLEPLADMLRDFVARGGTLWACTPCVKSRGYAQEQLIEGVVIAGSSVMHELIKRGAATL
CCHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHCCCEEECHHHHHHHHHCCCCCC
SF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA