| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is prmD
Identifier: 124266146
GI number: 124266146
Start: 1009815
End: 1010174
Strand: Direct
Name: prmD
Synonym: Mpe_A0953
Alternate gene names: NA
Gene position: 1009815-1010174 (Clockwise)
Preceding gene: 124266145
Following gene: 124266147
Centisome position: 24.97
GC content: 60.83
Gene sequence:
>360_bases ATGTCAGCTACCACGAACAGCAGTTCGATCTTCAAGGCCTTCAAGGATCTGGCCTTCGAGGAAACCGTGTCCCACCAGTG CGGTGTGACGATGAACGACAGCGTCGAGGCGCGCGCGATCGCCGAGCTGATGGCCACCAAGCCCGGCATCCGCGTGACCT ACATGCCCGCGATGATCCGCATCGACGGCGAGGGCCGCATCGAGTTCAAGATGGACGAGATCGCCGAGACGCTGGGCCGC GAGATGACGCCCCACCTGTTCGAGATCTCCACCTCGACCCACTACGGTCGGATGGTGATGGTCGACGAGAACACCGTGGT CCTGTTCGGGAACATGGAAGAAGCGATGCAGTACGAATAG
Upstream 100 bases:
>100_bases GTCGAGCGCGTGAAGGCCATCTCGCAGCAGATCGGCGTGGCACTGCCGGCCTCGCTGGCCGCCTGACGCCCCCCGACCCC ACTGAACCAAGGACAACACC
Downstream 100 bases:
>100_bases TGCCCCCGCCTGCGATGGGCGCCGCGGCGTCCATCGCAGGGGCACTTGAACAGCCAGCCACACGAGAGACAGAGGAGACG AGCCATGCCCAACATCATGT
Product: propane monoxygenase coupling protein
Products: NA
Alternate protein names: Phenol 2-Monooxygenase; Monooxygenase Component; Propane Monoxygenase Coupling Protein; Methane/Phenol/luene Monooxygenase; Propane Monooxygenase Coupling Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIRIDGEGRIEFKMDEIAETLGR EMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE
Sequences:
>Translated_119_residues MSATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIRIDGEGRIEFKMDEIAETLGR EMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE >Mature_118_residues SATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIRIDGEGRIEFKMDEIAETLGRE MTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13368; Mature: 13237
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 9.2 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEE IDGEGRIEFKMDEIAETLGREMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE ECCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECHHHHHCCC >Mature Secondary Structure SATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIR CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEE IDGEGRIEFKMDEIAETLGREMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE ECCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA