Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is prmD

Identifier: 124266146

GI number: 124266146

Start: 1009815

End: 1010174

Strand: Direct

Name: prmD

Synonym: Mpe_A0953

Alternate gene names: NA

Gene position: 1009815-1010174 (Clockwise)

Preceding gene: 124266145

Following gene: 124266147

Centisome position: 24.97

GC content: 60.83

Gene sequence:

>360_bases
ATGTCAGCTACCACGAACAGCAGTTCGATCTTCAAGGCCTTCAAGGATCTGGCCTTCGAGGAAACCGTGTCCCACCAGTG
CGGTGTGACGATGAACGACAGCGTCGAGGCGCGCGCGATCGCCGAGCTGATGGCCACCAAGCCCGGCATCCGCGTGACCT
ACATGCCCGCGATGATCCGCATCGACGGCGAGGGCCGCATCGAGTTCAAGATGGACGAGATCGCCGAGACGCTGGGCCGC
GAGATGACGCCCCACCTGTTCGAGATCTCCACCTCGACCCACTACGGTCGGATGGTGATGGTCGACGAGAACACCGTGGT
CCTGTTCGGGAACATGGAAGAAGCGATGCAGTACGAATAG

Upstream 100 bases:

>100_bases
GTCGAGCGCGTGAAGGCCATCTCGCAGCAGATCGGCGTGGCACTGCCGGCCTCGCTGGCCGCCTGACGCCCCCCGACCCC
ACTGAACCAAGGACAACACC

Downstream 100 bases:

>100_bases
TGCCCCCGCCTGCGATGGGCGCCGCGGCGTCCATCGCAGGGGCACTTGAACAGCCAGCCACACGAGAGACAGAGGAGACG
AGCCATGCCCAACATCATGT

Product: propane monoxygenase coupling protein

Products: NA

Alternate protein names: Phenol 2-Monooxygenase; Monooxygenase Component; Propane Monoxygenase Coupling Protein; Methane/Phenol/luene Monooxygenase; Propane Monooxygenase Coupling Protein

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIRIDGEGRIEFKMDEIAETLGR
EMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE

Sequences:

>Translated_119_residues
MSATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIRIDGEGRIEFKMDEIAETLGR
EMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE
>Mature_118_residues
SATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIRIDGEGRIEFKMDEIAETLGRE
MTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13368; Mature: 13237

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
9.2 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEE
IDGEGRIEFKMDEIAETLGREMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE
ECCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECHHHHHCCC
>Mature Secondary Structure 
SATTNSSSIFKAFKDLAFEETVSHQCGVTMNDSVEARAIAELMATKPGIRVTYMPAMIR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEE
IDGEGRIEFKMDEIAETLGREMTPHLFEISTSTHYGRMVMVDENTVVLFGNMEEAMQYE
ECCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA