| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266133
Identifier: 124266133
GI number: 124266133
Start: 993061
End: 993936
Strand: Reverse
Name: 124266133
Synonym: Mpe_A0940
Alternate gene names: NA
Gene position: 993936-993061 (Counterclockwise)
Preceding gene: 124266134
Following gene: 124266132
Centisome position: 24.58
GC content: 71.58
Gene sequence:
>876_bases ATGCCGGCCCGGCGGCCTTTGCACTTCGCGCACGGCAGGCCGGGCCCCGCGCCACAAACACAGAACATGAGACAGAGAGA CGCCGTGAAGCCCCTGACCGCGGCAGCCGCCTTGCTGTGCTGCCTGGCGCCCGCACACGCCGGCGACGGCATCAGCACCG ACCGGCCCGATTTCGTGGAATCCAGCCAGGTGGTCGGCAAAGGCCGGTTCCAGCTGGAGACGGGACTCGCCCGGGAACGC AGCGGCGATGCCGCGGGGAACCGGCTGAGGGTGGACTCGACACCGACGCTGCTGCGCCTGGGTGTCAGCGAGACCCTCGA ACTGCGGATCGAGACCGACGGTCATCTGAGGTCCCGATCCGAGGCCCCGGCCGCCTCGCGCGTCACGCGCGAGCGAGGCT TTGCGGACACCTCGCTCGGCGTCAAGTGGCACATGCAGGATGGCGATGAGGCGGCCGGGCGCCCGGCCGTCGCCTGGCTC CTGCATGTGGACGTGGACACGGGATCGGCCGCGTTCCGCGGCAGCGGCCTGCGCCCCTCCCTGCGCGTGGTCGGCGAGTG GGAGCTGGACGGCGCGATGTCGGTGGGCGCCATGGGCGGCATCGCGTTGGATCGCGACACCGACAGCGGGCGGTTCGCCA CCGGCATTCTCGCGGTGACCGCGGGCAAGTCGTGGACCGACCGCTTCCGCACGTTTGTCGAGCTGGCGGGCCGGCAGCTC GCCCCGTCCCGCCACGGCGGGTCGGTGGTGAGCGTCGACGCGGGCACCGCCTACCTCCTGAGCCCCACGGTCCAGGTGGA CGCCGTGGTCTCGCGCGGCATCACCCACACCTCACCGGACTGGGAGTTCGGTGCCGGACTGTCGATCAGGTTCTAA
Upstream 100 bases:
>100_bases GCGCTGAACATCCTGGAAGAGGTCGCGACCGGCACCGGGAAGTAGACGGCAGACCGTGCTGCCGGGGCCGCCGGGTCGCT GCGTTCGGGCACTGCCTCGA
Downstream 100 bases:
>100_bases CCCAGGAGATCGCTTCCCCATGAAGACACGCACCTTCCTCCTCAGCGTCGCCGGCTTGCTGCTCGCGACCGGCACTTGCT TCGCTGCGGGCGCCCTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPARRPLHFAHGRPGPAPQTQNMRQRDAVKPLTAAAALLCCLAPAHAGDGISTDRPDFVESSQVVGKGRFQLETGLARER SGDAAGNRLRVDSTPTLLRLGVSETLELRIETDGHLRSRSEAPAASRVTRERGFADTSLGVKWHMQDGDEAAGRPAVAWL LHVDVDTGSAAFRGSGLRPSLRVVGEWELDGAMSVGAMGGIALDRDTDSGRFATGILAVTAGKSWTDRFRTFVELAGRQL APSRHGGSVVSVDAGTAYLLSPTVQVDAVVSRGITHTSPDWEFGAGLSIRF
Sequences:
>Translated_291_residues MPARRPLHFAHGRPGPAPQTQNMRQRDAVKPLTAAAALLCCLAPAHAGDGISTDRPDFVESSQVVGKGRFQLETGLARER SGDAAGNRLRVDSTPTLLRLGVSETLELRIETDGHLRSRSEAPAASRVTRERGFADTSLGVKWHMQDGDEAAGRPAVAWL LHVDVDTGSAAFRGSGLRPSLRVVGEWELDGAMSVGAMGGIALDRDTDSGRFATGILAVTAGKSWTDRFRTFVELAGRQL APSRHGGSVVSVDAGTAYLLSPTVQVDAVVSRGITHTSPDWEFGAGLSIRF >Mature_290_residues PARRPLHFAHGRPGPAPQTQNMRQRDAVKPLTAAAALLCCLAPAHAGDGISTDRPDFVESSQVVGKGRFQLETGLARERS GDAAGNRLRVDSTPTLLRLGVSETLELRIETDGHLRSRSEAPAASRVTRERGFADTSLGVKWHMQDGDEAAGRPAVAWLL HVDVDTGSAAFRGSGLRPSLRVVGEWELDGAMSVGAMGGIALDRDTDSGRFATGILAVTAGKSWTDRFRTFVELAGRQLA PSRHGGSVVSVDAGTAYLLSPTVQVDAVVSRGITHTSPDWEFGAGLSIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30913; Mature: 30782
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARRPLHFAHGRPGPAPQTQNMRQRDAVKPLTAAAALLCCLAPAHAGDGISTDRPDFVE CCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHC SSQVVGKGRFQLETGLARERSGDAAGNRLRVDSTPTLLRLGVSETLELRIETDGHLRSRS CCHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCCCCCCCC EAPAASRVTRERGFADTSLGVKWHMQDGDEAAGRPAVAWLLHVDVDTGSAAFRGSGLRPS CCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCCC LRVVGEWELDGAMSVGAMGGIALDRDTDSGRFATGILAVTAGKSWTDRFRTFVELAGRQL EEEEEEEECCCCEEECCCCCEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC APSRHGGSVVSVDAGTAYLLSPTVQVDAVVSRGITHTSPDWEFGAGLSIRF CCCCCCCCEEEECCCCEEEECCCEEEHHHHHCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure PARRPLHFAHGRPGPAPQTQNMRQRDAVKPLTAAAALLCCLAPAHAGDGISTDRPDFVE CCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHC SSQVVGKGRFQLETGLARERSGDAAGNRLRVDSTPTLLRLGVSETLELRIETDGHLRSRS CCHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCCCCCCCC EAPAASRVTRERGFADTSLGVKWHMQDGDEAAGRPAVAWLLHVDVDTGSAAFRGSGLRPS CCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCCC LRVVGEWELDGAMSVGAMGGIALDRDTDSGRFATGILAVTAGKSWTDRFRTFVELAGRQL EEEEEEEECCCCEEECCCCCEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC APSRHGGSVVSVDAGTAYLLSPTVQVDAVVSRGITHTSPDWEFGAGLSIRF CCCCCCCCEEEECCCCEEEECCCEEEHHHHHCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA