| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266121
Identifier: 124266121
GI number: 124266121
Start: 984275
End: 985132
Strand: Direct
Name: 124266121
Synonym: Mpe_A0928
Alternate gene names: NA
Gene position: 984275-985132 (Clockwise)
Preceding gene: 124266120
Following gene: 124266122
Centisome position: 24.34
GC content: 65.15
Gene sequence:
>858_bases ATGGCCAGCAAGAAGGTGATCGACATGCGCAGCCGCCCTGCGTTCCTGCACGACTTCTACGGCAAGACGCGCGGCACGCC GGAGTTCGAGGTCGTGAAGTGGCTGAACGGCCGGGTCGGCTCGCGGGACCTGGAGCACTTCACGCATTCGAAGAACATCG ATGGCTACCTGCGCGACATCAAGGAGACGCGCATAACGGCGGCGGTGGTCGTCGGCCGCGACACACCCGGCATCAAGCAC TCCAACGACGAGATCCACGACCTCGTCAAGGGCCACAAGGAACTGGTCGGGGTGGGCTCGATCGATCCGCACCGCTGGGG CGTCAAGGCGGCGATCGACGAGGTGGAGCGCGCGGTGCGGCAGCTCGACCTGAAGGCGATCAACGTCGAGCCCGGCTTCG GCAGCCCGCTGTGCAAGGCCGACGATCCGATGCTGTTCCCGATCTACGACGCCTGCGCGCAGCTCGGCGTGCCAGTCTCC ATCATGTCCGGCCCCACCGCGCCGAGCCTCGACATGGTGACGCCGACCGCGGTTGGCCATGTGGCGAAGGCCTTCCCCAA GCTGTCGATCATCTGCTACCACGGCTTCTATCCGTACGTGAACGAGATCATCGGCGTCGCGTTCCGCTGGGAGAACGTGT TCATCGTGCCCGACATGTACATCTTCGCGCCGGGAGGCTCGCTCTACGTCGAGGCCGCGAACGGCTGCATGCGCCACCAG ATCCTGTTCGGCAGCTCCTACCCGTTCCGGCCGATGGGACAGTCGATCAACGACTACCGCACCCTCGGTTTCGCGGAGGG CGTGATCGACGACGTGATGTACGGCAACGCGAAGCGCGTGCTGAAGCTCGGCGTCTAG
Upstream 100 bases:
>100_bases CGCACCGGCAAGGCGCCGGCCGAGGCGAAGCAGCCGGAATGAAACCTGTCGCGCCGTCGACCCGAACAACGAACGAACCA TCCAAGAAGGAGAACGATCC
Downstream 100 bases:
>100_bases CCGCCCGGACCGGAGAACCGCCGTGAAGGACCTCGAGATACGCGCCGCGCGGCTGTCCGACGTGCCGCGTCTCCTGGAGT TCTACAAGCAGCTCGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Antibiotic-Resistance Protein; Amidohydrolase Family
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MASKKVIDMRSRPAFLHDFYGKTRGTPEFEVVKWLNGRVGSRDLEHFTHSKNIDGYLRDIKETRITAAVVVGRDTPGIKH SNDEIHDLVKGHKELVGVGSIDPHRWGVKAAIDEVERAVRQLDLKAINVEPGFGSPLCKADDPMLFPIYDACAQLGVPVS IMSGPTAPSLDMVTPTAVGHVAKAFPKLSIICYHGFYPYVNEIIGVAFRWENVFIVPDMYIFAPGGSLYVEAANGCMRHQ ILFGSSYPFRPMGQSINDYRTLGFAEGVIDDVMYGNAKRVLKLGV
Sequences:
>Translated_285_residues MASKKVIDMRSRPAFLHDFYGKTRGTPEFEVVKWLNGRVGSRDLEHFTHSKNIDGYLRDIKETRITAAVVVGRDTPGIKH SNDEIHDLVKGHKELVGVGSIDPHRWGVKAAIDEVERAVRQLDLKAINVEPGFGSPLCKADDPMLFPIYDACAQLGVPVS IMSGPTAPSLDMVTPTAVGHVAKAFPKLSIICYHGFYPYVNEIIGVAFRWENVFIVPDMYIFAPGGSLYVEAANGCMRHQ ILFGSSYPFRPMGQSINDYRTLGFAEGVIDDVMYGNAKRVLKLGV >Mature_284_residues ASKKVIDMRSRPAFLHDFYGKTRGTPEFEVVKWLNGRVGSRDLEHFTHSKNIDGYLRDIKETRITAAVVVGRDTPGIKHS NDEIHDLVKGHKELVGVGSIDPHRWGVKAAIDEVERAVRQLDLKAINVEPGFGSPLCKADDPMLFPIYDACAQLGVPVSI MSGPTAPSLDMVTPTAVGHVAKAFPKLSIICYHGFYPYVNEIIGVAFRWENVFIVPDMYIFAPGGSLYVEAANGCMRHQI LFGSSYPFRPMGQSINDYRTLGFAEGVIDDVMYGNAKRVLKLGV
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31526; Mature: 31395
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKKVIDMRSRPAFLHDFYGKTRGTPEFEVVKWLNGRVGSRDLEHFTHSKNIDGYLRDI CCCCCEECCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHH KETRITAAVVVGRDTPGIKHSNDEIHDLVKGHKELVGVGSIDPHRWGVKAAIDEVERAVR HHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHH QLDLKAINVEPGFGSPLCKADDPMLFPIYDACAQLGVPVSIMSGPTAPSLDMVTPTAVGH HHCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHH VAKAFPKLSIICYHGFYPYVNEIIGVAFRWENVFIVPDMYIFAPGGSLYVEAANGCMRHQ HHHHCCCEEEEEEECCHHHHHHHHHEEEEECCEEECCCEEEEECCCCEEEEECCCCEEEE ILFGSSYPFRPMGQSINDYRTLGFAEGVIDDVMYGNAKRVLKLGV EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECC >Mature Secondary Structure ASKKVIDMRSRPAFLHDFYGKTRGTPEFEVVKWLNGRVGSRDLEHFTHSKNIDGYLRDI CCCCEECCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHH KETRITAAVVVGRDTPGIKHSNDEIHDLVKGHKELVGVGSIDPHRWGVKAAIDEVERAVR HHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHH QLDLKAINVEPGFGSPLCKADDPMLFPIYDACAQLGVPVSIMSGPTAPSLDMVTPTAVGH HHCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHH VAKAFPKLSIICYHGFYPYVNEIIGVAFRWENVFIVPDMYIFAPGGSLYVEAANGCMRHQ HHHHCCCEEEEEEECCHHHHHHHHHEEEEECCEEECCCEEEEECCCCEEEEECCCCEEEE ILFGSSYPFRPMGQSINDYRTLGFAEGVIDDVMYGNAKRVLKLGV EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA