| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is nrtB [H]
Identifier: 124266119
GI number: 124266119
Start: 982491
End: 983315
Strand: Direct
Name: nrtB [H]
Synonym: Mpe_A0926
Alternate gene names: 124266119
Gene position: 982491-983315 (Clockwise)
Preceding gene: 124266118
Following gene: 124266120
Centisome position: 24.29
GC content: 68.97
Gene sequence:
>825_bases ATGAGCCATGGCATCACCCGGTTTCGCCAGCGCGTGCTGAGCCGCTCGACGCTGCGCGCGATCATTGCGCTGACGGCCTT CGTCATCCTGTGGGAACTGGGCGCGCGCTCGCCCGAATGGCTGGGCTTCGCGCTGCCCTGGATCGGCCAGGTGCCGGCGC CCAGCGGCGTGCTCAAGGCCTGGGCAGGCCTGCTGGGCAACGCCGGCTACTGGGAGAGCTGGTACCTCAGCCTGGTGCGG GTGCTCGCGGGCTTCGGCGCGGCGATGCTGATCGGCATCCCGCTGGGCCTGATGATGGCCGTGAGCAAGGCGGTGCACGG CGTCGTGTTCCCGAGCTTCGAGCTGCTGCGGCCGATCCCGCCGCTGGCCTGGGTGCCGGCCTCGATCATCTTCTGGCCGA CGGCCGAGATGTCGATCGCCTTCGTGACCTTCCTCGGCGCCTTCTTCACCATCGTCATCAACGTCGTCGGCGGGGCCAAG TCGATCGACGTGCGCTACTTCCAGGCGGCGCAGGCGATGGGCGCGTCGCAGTGGGACATCTTCCGCCGCGTGGTGCTGCC GGCCACGCTGCCGTCGATCGTGGTCGGCTCCGCGGTGGGCATGGGCATCACCTGGGAGGTGGTGGTGGCGGCCGAGATGA TCTCCGGGGGCGGCAAGAGCGCCGAAGGCGGGGGACTGGGCTTCTTCATCTGGAACTCGTACGTGGGCGGTTCGTACGAG CAGATCGTCGTCGGCATGATCAGCATCGGCATCGCGGGCTTCGCCTGCAGCGAGGCGCTGCGCGCGCTCGGCGGACTGGT CACGCCCTGGTTGAAACAGCGTTGA
Upstream 100 bases:
>100_bases GACCAGCCCGCGCTTCCGCGAGCTGATGGAGGAGACCAGTGCGATCGTGCACGAGGAAGCGAAGAAGTCCTTCGCGGCCG GCGAGAAGGAGGGCTGAACC
Downstream 100 bases:
>100_bases GGAGTGCACGATGGCCCAACACAAGCCTTCGGGCAGCACGCGCGGCGAGATCCAGGTCCGCAACGTCACCAAGACCTACG GCACCGGACCGTTCGCCAAG
Product: nitrate ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSHGITRFRQRVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGYWESWYLSLVR VLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASIIFWPTAEMSIAFVTFLGAFFTIVINVVGGAK SIDVRYFQAAQAMGASQWDIFRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYE QIVVGMISIGIAGFACSEALRALGGLVTPWLKQR
Sequences:
>Translated_274_residues MSHGITRFRQRVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGYWESWYLSLVR VLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASIIFWPTAEMSIAFVTFLGAFFTIVINVVGGAK SIDVRYFQAAQAMGASQWDIFRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYE QIVVGMISIGIAGFACSEALRALGGLVTPWLKQR >Mature_273_residues SHGITRFRQRVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKAWAGLLGNAGYWESWYLSLVRV LAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIPPLAWVPASIIFWPTAEMSIAFVTFLGAFFTIVINVVGGAKS IDVRYFQAAQAMGASQWDIFRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYEQ IVVGMISIGIAGFACSEALRALGGLVTPWLKQR
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=225, Percent_Identity=33.7777777777778, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87081802, Length=203, Percent_Identity=30.5418719211823, Blast_Score=78, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29231; Mature: 29100
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHGITRFRQRVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCHHHHHH WAGLLGNAGYWESWYLSLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIP HHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC PLAWVPASIIFWPTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDI CHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH FRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHH QIVVGMISIGIAGFACSEALRALGGLVTPWLKQR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure SHGITRFRQRVLSRSTLRAIIALTAFVILWELGARSPEWLGFALPWIGQVPAPSGVLKA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCHHHHHH WAGLLGNAGYWESWYLSLVRVLAGFGAAMLIGIPLGLMMAVSKAVHGVVFPSFELLRPIP HHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC PLAWVPASIIFWPTAEMSIAFVTFLGAFFTIVINVVGGAKSIDVRYFQAAQAMGASQWDI CHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH FRRVVLPATLPSIVVGSAVGMGITWEVVVAAEMISGGGKSAEGGGLGFFIWNSYVGGSYE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHH QIVVGMISIGIAGFACSEALRALGGLVTPWLKQR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]