| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is qheDH [H]
Identifier: 124266098
GI number: 124266098
Start: 958980
End: 961115
Strand: Direct
Name: qheDH [H]
Synonym: Mpe_A0905
Alternate gene names: 124266098
Gene position: 958980-961115 (Clockwise)
Preceding gene: 124266097
Following gene: 124266099
Centisome position: 23.71
GC content: 68.77
Gene sequence:
>2136_bases ATGCACCGACGCCCCGCCCCCTCACCCGCAGCGCTGGTTGCCCGGCTGGTCGTGACCCTGAGCCTGGCCTGCGGGCTGTC CGCCCCGTCGGCAGCCGCCGGCACCGAGGTGAACGACGCGGCCCTGAGCGACCCGAAGCAGGGTGCGAACTGGCTGGCCT ACGGCCGCAACTACAGCGAGCAGCGCTACAGCCCGCTGGCGCAGGTCCATGCCGGCAACGTGGGGCGGCTCGGGCTCGCG TGGTCGATGGCGCTGCCCGAAGACCGCTCTCTGCTGTCGACGCCGCTGATCGTCGACGGCGTCATGTACTTCACCGGCAG CTGGAGCAAGACCCGCGCGGTGGACGCCGCGACCGGCAAGCTGCTGTGGGAGTACGACCCGGAGTCGATCAAGCACGCTG GCGGCGAACGCCTGCGTGCCATGTGGGACTCCAGCCGCGGGCTGGCCTACTGGAAGGGCAAGCTGGTCATCGCGACCATC GACGGGCGGCTGATCGGCCTGGACGCGAAGACCGGCCAGAAGCTGTGGAGCACCCAGACCTTCGACCCGAAGCGACCGCT CTACATCTCCGGTCACCCGAAGGCCTTCCGCGACCTGGTGATCGTCGGCAACGGAGGCTCCGAGTTCGGCGCGGGCCGCG GCTTCGTCAGTGCGTACCACGTGGACAGCGGCAAGCTGGCGTGGAAGTTCTACGTGGTGCCGGGCAATCCCGCCGACGGC TTCGAGGACGAGGCCCAGGCGATGGCGGCCAAGACCTGGACCGGCGAGTGGTGGAAGCACGGCGGCGGCGGCCAGGTGTG GAACGGCCTCACCTACGACCCCGAGTACGACCAGATCCTGATCGGCACCGGCAACGGCGGTCCGTGGAACCGGAAGGTGC GCAGCCCGGACGGCGGCGACAACCTGTTCCTCTGCTCGATCGTGGCGCTGGACGCACGGACCGGCAAGTACAAGTGGCAC TACCAGACCGTGCCCGGCGAGACCTGGGACTACAACTCCAGCATGGACATGGTGCTGGCCGACCTGAAGCTGCGGCCGGG CGGCGGACCGCGCAAGGTGCTGCTGCATGCGCCGAAGAACGGCTTCTTCTATGTCATCGACCGCAAGAACGGCAAGCTGC TGTCGGCCGAGAAGATCGCCAAGGTGACCTGGGCGACCGGCATCGACATGAAGACCGGGCGGCCGATCGAGGCCGAGGGC GCGCGCTACGAGGACGGCTCGGAGCTGGTATGGCCCAGCGTCTACGGGGCCCACAACTGGCATGCCATGTCCTTCAATCC GAAGACCGGGCTGGTCTACATCCCCAAGGTCGAACTGCCCGCGCTGTTCACCGACACGGGCGTGCGGATCGTCGACTGGC GCAAGCCCGAGAACTTCGGCCAGCTCGATGTCGCGGTCGACATCGGCCTGGGCAGCGACATCCCCAAGGACGCCGGGGTG AGCTCGCTGCTGGCCTGGGACCCGGTGAAGCAGAAGAAGGCGTGGGAGGTGGCCCAGCCGAACTACTGGAACCCCGGCAC CATGACCACCGCGGGCAACCTGGTGTTCCAGGGCCGCATCGACGGCACGTTCATCGCCTACGACGCGCGCGACGGCAGGC AGCTGTGGTCGGTGCACGTCGGGTCCGGCATCAGCGCGCCGCCGGTCACCTACTCGGTGGGCGGCCGGCAGTACGTGTCG CTGCTCGTCGGCTGGGGCGGTGCCGGCATGTCGCTCGGTGGCGGCAGCTCGATGGCGCAGTACGGCTGGGGCTTTGGCGG CCAGACGCGGCAGTTGCTGACTTTCGCGCTCGACGGCAAGCTGCCGATGCCCGACGTGGGCAAGCCCGTGTTCGTCCGGC CCATCGTGCCGGCGGATTTCAAGCCCGACGAGAAGCTGGTCGATCGTGGCCGTGCGCTCTACGCCAGCACCTGCGTCTGG TGCCACAGCGCCGGCGCGGTGTCGGGAGGCTATGCGCCGGACCTGCGTGCCTCGCCGATGCTGCTGGACCTGAAGGCGTT GCGGACCGTACTCGAAGGCGCCCTGGTGCAGCGCGGCATGCCGAAATACCCCGACCTCACGGACGACGATCTCGTGGCAC TCCAGCACTACGTGCGCAGTCAGGCTATCGTGACTTCACAGCCGACCCCGCCCTAG
Upstream 100 bases:
>100_bases CGTTCAAGCCTACCCACCCGGGTGGAAAACTACCCTCGCGGGTAGTGGCCTGCGGCGACGCGGGCCGGGATCATCGCGCA CGCCCAAGGAGACCTGCACG
Downstream 100 bases:
>100_bases TCGGCACGGAGCGCACTGCATGATCGATCTCTACACCTCGGCCACGCCCAACGGCTGGAAGGCCAGCATCCTGCTCGAGG AACTGGGGGTGCCGTACACG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MHRRPAPSPAALVARLVVTLSLACGLSAPSAAAGTEVNDAALSDPKQGANWLAYGRNYSEQRYSPLAQVHAGNVGRLGLA WSMALPEDRSLLSTPLIVDGVMYFTGSWSKTRAVDAATGKLLWEYDPESIKHAGGERLRAMWDSSRGLAYWKGKLVIATI DGRLIGLDAKTGQKLWSTQTFDPKRPLYISGHPKAFRDLVIVGNGGSEFGAGRGFVSAYHVDSGKLAWKFYVVPGNPADG FEDEAQAMAAKTWTGEWWKHGGGGQVWNGLTYDPEYDQILIGTGNGGPWNRKVRSPDGGDNLFLCSIVALDARTGKYKWH YQTVPGETWDYNSSMDMVLADLKLRPGGGPRKVLLHAPKNGFFYVIDRKNGKLLSAEKIAKVTWATGIDMKTGRPIEAEG ARYEDGSELVWPSVYGAHNWHAMSFNPKTGLVYIPKVELPALFTDTGVRIVDWRKPENFGQLDVAVDIGLGSDIPKDAGV SSLLAWDPVKQKKAWEVAQPNYWNPGTMTTAGNLVFQGRIDGTFIAYDARDGRQLWSVHVGSGISAPPVTYSVGGRQYVS LLVGWGGAGMSLGGGSSMAQYGWGFGGQTRQLLTFALDGKLPMPDVGKPVFVRPIVPADFKPDEKLVDRGRALYASTCVW CHSAGAVSGGYAPDLRASPMLLDLKALRTVLEGALVQRGMPKYPDLTDDDLVALQHYVRSQAIVTSQPTPP
Sequences:
>Translated_711_residues MHRRPAPSPAALVARLVVTLSLACGLSAPSAAAGTEVNDAALSDPKQGANWLAYGRNYSEQRYSPLAQVHAGNVGRLGLA WSMALPEDRSLLSTPLIVDGVMYFTGSWSKTRAVDAATGKLLWEYDPESIKHAGGERLRAMWDSSRGLAYWKGKLVIATI DGRLIGLDAKTGQKLWSTQTFDPKRPLYISGHPKAFRDLVIVGNGGSEFGAGRGFVSAYHVDSGKLAWKFYVVPGNPADG FEDEAQAMAAKTWTGEWWKHGGGGQVWNGLTYDPEYDQILIGTGNGGPWNRKVRSPDGGDNLFLCSIVALDARTGKYKWH YQTVPGETWDYNSSMDMVLADLKLRPGGGPRKVLLHAPKNGFFYVIDRKNGKLLSAEKIAKVTWATGIDMKTGRPIEAEG ARYEDGSELVWPSVYGAHNWHAMSFNPKTGLVYIPKVELPALFTDTGVRIVDWRKPENFGQLDVAVDIGLGSDIPKDAGV SSLLAWDPVKQKKAWEVAQPNYWNPGTMTTAGNLVFQGRIDGTFIAYDARDGRQLWSVHVGSGISAPPVTYSVGGRQYVS LLVGWGGAGMSLGGGSSMAQYGWGFGGQTRQLLTFALDGKLPMPDVGKPVFVRPIVPADFKPDEKLVDRGRALYASTCVW CHSAGAVSGGYAPDLRASPMLLDLKALRTVLEGALVQRGMPKYPDLTDDDLVALQHYVRSQAIVTSQPTPP >Mature_711_residues MHRRPAPSPAALVARLVVTLSLACGLSAPSAAAGTEVNDAALSDPKQGANWLAYGRNYSEQRYSPLAQVHAGNVGRLGLA WSMALPEDRSLLSTPLIVDGVMYFTGSWSKTRAVDAATGKLLWEYDPESIKHAGGERLRAMWDSSRGLAYWKGKLVIATI DGRLIGLDAKTGQKLWSTQTFDPKRPLYISGHPKAFRDLVIVGNGGSEFGAGRGFVSAYHVDSGKLAWKFYVVPGNPADG FEDEAQAMAAKTWTGEWWKHGGGGQVWNGLTYDPEYDQILIGTGNGGPWNRKVRSPDGGDNLFLCSIVALDARTGKYKWH YQTVPGETWDYNSSMDMVLADLKLRPGGGPRKVLLHAPKNGFFYVIDRKNGKLLSAEKIAKVTWATGIDMKTGRPIEAEG ARYEDGSELVWPSVYGAHNWHAMSFNPKTGLVYIPKVELPALFTDTGVRIVDWRKPENFGQLDVAVDIGLGSDIPKDAGV SSLLAWDPVKQKKAWEVAQPNYWNPGTMTTAGNLVFQGRIDGTFIAYDARDGRQLWSVHVGSGISAPPVTYSVGGRQYVS LLVGWGGAGMSLGGGSSMAQYGWGFGGQTRQLLTFALDGKLPMPDVGKPVFVRPIVPADFKPDEKLVDRGRALYASTCVW CHSAGAVSGGYAPDLRASPMLLDLKALRTVLEGALVQRGMPKYPDLTDDDLVALQHYVRSQAIVTSQPTPP
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=464, Percent_Identity=27.5862068965517, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 77099; Mature: 77099
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRPAPSPAALVARLVVTLSLACGLSAPSAAAGTEVNDAALSDPKQGANWLAYGRNYSE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCH QRYSPLAQVHAGNVGRLGLAWSMALPEDRSLLSTPLIVDGVMYFTGSWSKTRAVDAATGK HHHCCHHHHCCCCCCCEEEEEEECCCCCCHHHCCCHHHEEEEEEECCCCCCEEEECCCCC LLWEYDPESIKHAGGERLRAMWDSSRGLAYWKGKLVIATIDGRLIGLDAKTGQKLWSTQT EEEEECHHHHHHCCHHHHHHHHCCCCCEEEEECEEEEEEECCEEEEEECCCCCHHHCCCC FDPKRPLYISGHPKAFRDLVIVGNGGSEFGAGRGFVSAYHVDSGKLAWKFYVVPGNPADG CCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCC FEDEAQAMAAKTWTGEWWKHGGGGQVWNGLTYDPEYDQILIGTGNGGPWNRKVRSPDGGD CCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC NLFLCSIVALDARTGKYKWHYQTVPGETWDYNSSMDMVLADLKLRPGGGPRKVLLHAPKN CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCC GFFYVIDRKNGKLLSAEKIAKVTWATGIDMKTGRPIEAEGARYEDGSELVWPSVYGAHNW CEEEEEECCCCCEECHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCE HAMSFNPKTGLVYIPKVELPALFTDTGVRIVDWRKPENFGQLDVAVDIGLGSDIPKDAGV EEEEECCCCCEEEECCCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCC SSLLAWDPVKQKKAWEVAQPNYWNPGTMTTAGNLVFQGRIDGTFIAYDARDGRQLWSVHV CHHEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCEEEEEECCCCCEEEEEEE GSGISAPPVTYSVGGRQYVSLLVGWGGAGMSLGGGSSMAQYGWGFGGQTRQLLTFALDGK CCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCC LPMPDVGKPVFVRPIVPADFKPDEKLVDRGRALYASTCVWCHSAGAVSGGYAPDLRASPM CCCCCCCCCEEEEECCCCCCCCCHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCE LLDLKALRTVLEGALVQRGMPKYPDLTDDDLVALQHYVRSQAIVTSQPTPP EEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCC >Mature Secondary Structure MHRRPAPSPAALVARLVVTLSLACGLSAPSAAAGTEVNDAALSDPKQGANWLAYGRNYSE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCH QRYSPLAQVHAGNVGRLGLAWSMALPEDRSLLSTPLIVDGVMYFTGSWSKTRAVDAATGK HHHCCHHHHCCCCCCCEEEEEEECCCCCCHHHCCCHHHEEEEEEECCCCCCEEEECCCCC LLWEYDPESIKHAGGERLRAMWDSSRGLAYWKGKLVIATIDGRLIGLDAKTGQKLWSTQT EEEEECHHHHHHCCHHHHHHHHCCCCCEEEEECEEEEEEECCEEEEEECCCCCHHHCCCC FDPKRPLYISGHPKAFRDLVIVGNGGSEFGAGRGFVSAYHVDSGKLAWKFYVVPGNPADG CCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCC FEDEAQAMAAKTWTGEWWKHGGGGQVWNGLTYDPEYDQILIGTGNGGPWNRKVRSPDGGD CCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC NLFLCSIVALDARTGKYKWHYQTVPGETWDYNSSMDMVLADLKLRPGGGPRKVLLHAPKN CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCC GFFYVIDRKNGKLLSAEKIAKVTWATGIDMKTGRPIEAEGARYEDGSELVWPSVYGAHNW CEEEEEECCCCCEECHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCE HAMSFNPKTGLVYIPKVELPALFTDTGVRIVDWRKPENFGQLDVAVDIGLGSDIPKDAGV EEEEECCCCCEEEECCCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCC SSLLAWDPVKQKKAWEVAQPNYWNPGTMTTAGNLVFQGRIDGTFIAYDARDGRQLWSVHV CHHEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCEEEEEECCCCCEEEEEEE GSGISAPPVTYSVGGRQYVSLLVGWGGAGMSLGGGSSMAQYGWGFGGQTRQLLTFALDGK CCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCC LPMPDVGKPVFVRPIVPADFKPDEKLVDRGRALYASTCVWCHSAGAVSGGYAPDLRASPM CCCCCCCCCEEEEECCCCCCCCCHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCE LLDLKALRTVLEGALVQRGMPKYPDLTDDDLVALQHYVRSQAIVTSQPTPP EEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]