Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is hitA [H]

Identifier: 124266033

GI number: 124266033

Start: 877657

End: 878007

Strand: Direct

Name: hitA [H]

Synonym: Mpe_A0840

Alternate gene names: 124266033

Gene position: 877657-878007 (Clockwise)

Preceding gene: 124266032

Following gene: 124266034

Centisome position: 21.7

GC content: 65.81

Gene sequence:

>351_bases
ATGAGCGACCACGATCCGAACTGCATCTTCTGCAAGATCATTGCCGGGCAGATCCCGTCCCGCAAGGCCTACGAGGACGA
GCACCTGCTGTCCTTCCACGACATCAACCCCTGGGCGCCGGTGCATGTGCTGGTGATCCCCAAGCGCCACATCGCGACAC
TCGCCGACATCGGCCCCGGTGACCAGGAGCTGATGGGGCGCATGCTGGCGCTGGCCCCGCGGCTGATGCGTGAACTGGGC
GTCGACAACGGCTTCCGCACCCTGATCAACACCGGCAAGGACGGCATGCAGGAGGTCTACCACCTGCACATGCACGTGAT
CGGCGGCCCCCGCCCCTGGGCCAAGGGGTGA

Upstream 100 bases:

>100_bases
GCTGATCTCCATCTGGTTCCTCTACCGCATCGTGCGCGGCTGGCTGAATCTCAACGGCAACCAGCCGATGCCGTCCTGAC
CACTTTCTGCGCCGTCCCCC

Downstream 100 bases:

>100_bases
ACCTCGGCCCGCTTTGCGGGTCTGTCATGCGGGGCTGGCCTAAAATCTGCGGCTGCCCTTACCGGGTCTTCAGGAGAACG
ACATGGGTTCCTTCAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPGDQELMGRMLALAPRLMRELG
VDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG

Sequences:

>Translated_116_residues
MSDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPGDQELMGRMLALAPRLMRELG
VDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG
>Mature_115_residues
SDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPGDQELMGRMLALAPRLMRELGV
DNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=103, Percent_Identity=43.6893203883495, Blast_Score=105, Evalue=1e-23,
Organism=Homo sapiens, GI14211923, Length=102, Percent_Identity=44.1176470588235, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17506713, Length=103, Percent_Identity=45.6310679611651, Blast_Score=112, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6320078, Length=103, Percent_Identity=42.7184466019417, Blast_Score=78, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28574010, Length=103, Percent_Identity=43.6893203883495, Blast_Score=102, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24581222, Length=103, Percent_Identity=43.6893203883495, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12996; Mature: 12865

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPG
CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHCCCCC
DQELMGRMLALAPRLMRELGVDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPG
CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHCCCCC
DQELMGRMLALAPRLMRELGVDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA