| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is hitA [H]
Identifier: 124266033
GI number: 124266033
Start: 877657
End: 878007
Strand: Direct
Name: hitA [H]
Synonym: Mpe_A0840
Alternate gene names: 124266033
Gene position: 877657-878007 (Clockwise)
Preceding gene: 124266032
Following gene: 124266034
Centisome position: 21.7
GC content: 65.81
Gene sequence:
>351_bases ATGAGCGACCACGATCCGAACTGCATCTTCTGCAAGATCATTGCCGGGCAGATCCCGTCCCGCAAGGCCTACGAGGACGA GCACCTGCTGTCCTTCCACGACATCAACCCCTGGGCGCCGGTGCATGTGCTGGTGATCCCCAAGCGCCACATCGCGACAC TCGCCGACATCGGCCCCGGTGACCAGGAGCTGATGGGGCGCATGCTGGCGCTGGCCCCGCGGCTGATGCGTGAACTGGGC GTCGACAACGGCTTCCGCACCCTGATCAACACCGGCAAGGACGGCATGCAGGAGGTCTACCACCTGCACATGCACGTGAT CGGCGGCCCCCGCCCCTGGGCCAAGGGGTGA
Upstream 100 bases:
>100_bases GCTGATCTCCATCTGGTTCCTCTACCGCATCGTGCGCGGCTGGCTGAATCTCAACGGCAACCAGCCGATGCCGTCCTGAC CACTTTCTGCGCCGTCCCCC
Downstream 100 bases:
>100_bases ACCTCGGCCCGCTTTGCGGGTCTGTCATGCGGGGCTGGCCTAAAATCTGCGGCTGCCCTTACCGGGTCTTCAGGAGAACG ACATGGGTTCCTTCAGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPGDQELMGRMLALAPRLMRELG VDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG
Sequences:
>Translated_116_residues MSDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPGDQELMGRMLALAPRLMRELG VDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG >Mature_115_residues SDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPGDQELMGRMLALAPRLMRELGV DNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=103, Percent_Identity=43.6893203883495, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI14211923, Length=102, Percent_Identity=44.1176470588235, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17506713, Length=103, Percent_Identity=45.6310679611651, Blast_Score=112, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320078, Length=103, Percent_Identity=42.7184466019417, Blast_Score=78, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574010, Length=103, Percent_Identity=43.6893203883495, Blast_Score=102, Evalue=6e-23, Organism=Drosophila melanogaster, GI24581222, Length=103, Percent_Identity=43.6893203883495, Blast_Score=102, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12996; Mature: 12865
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPG CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHCCCCC DQELMGRMLALAPRLMRELGVDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SDHDPNCIFCKIIAGQIPSRKAYEDEHLLSFHDINPWAPVHVLVIPKRHIATLADIGPG CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHCCCCC DQELMGRMLALAPRLMRELGVDNGFRTLINTGKDGMQEVYHLHMHVIGGPRPWAKG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA