| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265978
Identifier: 124265978
GI number: 124265978
Start: 820805
End: 821305
Strand: Reverse
Name: 124265978
Synonym: Mpe_A0785
Alternate gene names: NA
Gene position: 821305-820805 (Counterclockwise)
Preceding gene: 124265979
Following gene: 124265977
Centisome position: 20.31
GC content: 65.67
Gene sequence:
>501_bases ATGTATAGAATGAGATTCATAATGCCAGCCAAAGCACCTCCTGTCGGCGAACTTCTCGCCACCCGGCTACAGGCCCTGGG GGAGCGCATTCGCGCCCACCGTGGACGCCAGAAAGTCAGCGCTACAGTGGCCGCGGAAGCCGCGGGCATGTCCCGGGTGA CCTGGCACCGCATCGAACGGGGCGAGCCTTCCGTGACCATGGGTGCCTACCTCAGCGCCATCGACGCGATCGGGTTGCAA CTGGAGCTTCGCGATCCGCAGGCCCGCCCGGCCACTGCCGACAGGGCCAGCCTGCCGGAGCGTGTGCGGCTGGGCGATTT TCCCCAGCTCAAGCGCCTGGCCTGGCAACTGCACGACGTCGAAGAACTCAGCCCGGTGGATGCCTTGAACCTGTACGAGC GCAACTGGCGTCACATCGACCGAGCCCGTATGGAGCCGGCCGAGCGTGCACTGCTCCAAGTCCTGGTGGACCAACTCGGC GGGGGGCGCCTGCTTGTTTGA
Upstream 100 bases:
>100_bases GCGGTGGCGCCACAAGCATGACCCTGTCGCCTCGCGCTCTAACGCGGCAGCGGGACTGAGCGCCCGAAAATAGATTCTCA TTCTGTACAAAAATGGAAAA
Downstream 100 bases:
>100_bases ACGGCCGCATCACCGCCGCATCGCGACCGTCCTGGCAGCCCTGGATGCCGACGTCCTGGTGGCGAACGACTGCCTCTTCG GTGGCGGAACCGCCATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MYRMRFIMPAKAPPVGELLATRLQALGERIRAHRGRQKVSATVAAEAAGMSRVTWHRIERGEPSVTMGAYLSAIDAIGLQ LELRDPQARPATADRASLPERVRLGDFPQLKRLAWQLHDVEELSPVDALNLYERNWRHIDRARMEPAERALLQVLVDQLG GGRLLV
Sequences:
>Translated_166_residues MYRMRFIMPAKAPPVGELLATRLQALGERIRAHRGRQKVSATVAAEAAGMSRVTWHRIERGEPSVTMGAYLSAIDAIGLQ LELRDPQARPATADRASLPERVRLGDFPQLKRLAWQLHDVEELSPVDALNLYERNWRHIDRARMEPAERALLQVLVDQLG GGRLLV >Mature_166_residues MYRMRFIMPAKAPPVGELLATRLQALGERIRAHRGRQKVSATVAAEAAGMSRVTWHRIERGEPSVTMGAYLSAIDAIGLQ LELRDPQARPATADRASLPERVRLGDFPQLKRLAWQLHDVEELSPVDALNLYERNWRHIDRARMEPAERALLQVLVDQLG GGRLLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18690; Mature: 18690
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRMRFIMPAKAPPVGELLATRLQALGERIRAHRGRQKVSATVAAEAAGMSRVTWHRIER CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHC GEPSVTMGAYLSAIDAIGLQLELRDPQARPATADRASLPERVRLGDFPQLKRLAWQLHDV CCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHH EELSPVDALNLYERNWRHIDRARMEPAERALLQVLVDQLGGGRLLV HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MYRMRFIMPAKAPPVGELLATRLQALGERIRAHRGRQKVSATVAAEAAGMSRVTWHRIER CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHC GEPSVTMGAYLSAIDAIGLQLELRDPQARPATADRASLPERVRLGDFPQLKRLAWQLHDV CCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHH EELSPVDALNLYERNWRHIDRARMEPAERALLQVLVDQLGGGRLLV HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA