Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265940

Identifier: 124265940

GI number: 124265940

Start: 775265

End: 775747

Strand: Direct

Name: 124265940

Synonym: Mpe_A0747

Alternate gene names: NA

Gene position: 775265-775747 (Clockwise)

Preceding gene: 124265939

Following gene: 124265941

Centisome position: 19.17

GC content: 69.98

Gene sequence:

>483_bases
ATGAATGAGGACCAGAAACCGGTGGCGATCCACGCGCTCCAGGCCGCCGTGCGGACGAAGCCGTCCAACTATCCCGAGCC
CTTCGCGTCCCGCATGGCGGGGCGCGTCATCCGTCCGCTCGGTGATGTCTTCGGCCTGTCGAACTTCGGTGTCAATCTGA
CGCTGCTGGCGCCCGGCGCGGTGTCGGCGCTGCGGCACGCGCACCGCCGGCAGGACGAGTTCGTCTACGTCGTGGCGGGC
TCGCCGACGCTGGTCACCGACGCGGGCGAGACGCCGCTGCAGCCCGGCATGTGCGCCGGATTCCGCGCGGGCAGCGGCGA
TGCGCACCGGCTGGTCAATCGCACCGACCACGATTGCCTCTTCCTGGTGGTGGGCGACAGGACCGCCGGCGACAGCGCGA
TCTACCCGGACGACGACCTCGTGGCGCAGCTGGGCGAGGGCGGCCGGTGGCAGTTCCTGCACAAGAACGGCGATCCGTAT
TGA

Upstream 100 bases:

>100_bases
TTCAACTACCTGCACGGCCTGGAGCAGGGCACGCTCTGAACGCCCGCGTCGAGCCCGGACCTCGGCGCCGAACCCATGAC
ATCCAGAGTCGGAGGAACCG

Downstream 100 bases:

>100_bases
CGGACCCCCCGCCCGCATCATGAAGCCGAGCTCTCGCCACGTCCTGATCGCGTGGAACGAACGCCTGGAGCGCACCGTGG
GTGCGGCGCTGCGCCTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Cupin Domain-Containing Protein; Cupin 2 Protein; Transcriptional Regulator Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Hemolysin; Homologue Of Hemolysin Protein; Cupin 2 Barrel; Sugar Oxidoreductase

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNEDQKPVAIHALQAAVRTKPSNYPEPFASRMAGRVIRPLGDVFGLSNFGVNLTLLAPGAVSALRHAHRRQDEFVYVVAG
SPTLVTDAGETPLQPGMCAGFRAGSGDAHRLVNRTDHDCLFLVVGDRTAGDSAIYPDDDLVAQLGEGGRWQFLHKNGDPY

Sequences:

>Translated_160_residues
MNEDQKPVAIHALQAAVRTKPSNYPEPFASRMAGRVIRPLGDVFGLSNFGVNLTLLAPGAVSALRHAHRRQDEFVYVVAG
SPTLVTDAGETPLQPGMCAGFRAGSGDAHRLVNRTDHDCLFLVVGDRTAGDSAIYPDDDLVAQLGEGGRWQFLHKNGDPY
>Mature_160_residues
MNEDQKPVAIHALQAAVRTKPSNYPEPFASRMAGRVIRPLGDVFGLSNFGVNLTLLAPGAVSALRHAHRRQDEFVYVVAG
SPTLVTDAGETPLQPGMCAGFRAGSGDAHRLVNRTDHDCLFLVVGDRTAGDSAIYPDDDLVAQLGEGGRWQFLHKNGDPY

Specific function: Unknown

COG id: COG3837

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17224; Mature: 17224

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDQKPVAIHALQAAVRTKPSNYPEPFASRMAGRVIRPLGDVFGLSNFGVNLTLLAPGA
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH
VSALRHAHRRQDEFVYVVAGSPTLVTDAGETPLQPGMCAGFRAGSGDAHRLVNRTDHDCL
HHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE
FLVVGDRTAGDSAIYPDDDLVAQLGEGGRWQFLHKNGDPY
EEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure
MNEDQKPVAIHALQAAVRTKPSNYPEPFASRMAGRVIRPLGDVFGLSNFGVNLTLLAPGA
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH
VSALRHAHRRQDEFVYVVAGSPTLVTDAGETPLQPGMCAGFRAGSGDAHRLVNRTDHDCL
HHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE
FLVVGDRTAGDSAIYPDDDLVAQLGEGGRWQFLHKNGDPY
EEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA