| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yqgE [C]
Identifier: 124265898
GI number: 124265898
Start: 735925
End: 736527
Strand: Direct
Name: yqgE [C]
Synonym: Mpe_A0705
Alternate gene names: 124265898
Gene position: 735925-736527 (Clockwise)
Preceding gene: 124265896
Following gene: 124265899
Centisome position: 18.2
GC content: 68.82
Gene sequence:
>603_bases ATGGGCTCGGACTCCGCCACCAACCTGACGAATCAGTTCCTGATTGCCATGCCCGGCATGGCCGACGATAACTTCGCCGG CTCGGTGGTCTACCTGTGCGAGCACACCGAGCGCGGTGCGCTCGGCCTGGTGATCAACAAGCCCAGCGACATCAAGCTGG GCCGCCTGTTCGAGAAGGTCGACCTGCCGCTCGACCGCGAGGAGCTGGCGGAGCAGCCGGTCTACCTCGGCGGGCCGGTG CAGACCGAGCGCGGTTTCGTGCTGCACGAGCGCGGCGAGGACGACGCGGCCGACATCGACGCCGATGGCGCCACCTACAC CTCCTCGCTGCGCATCCCCGGCGGCATGGCCATGACCACCAGCAAGGACGTGCTCGAGGCCCTGGCCAACGGTGCCGGCC CGAAGCGCGTGCTGGTCACGCTGGGCTATGCCGGCTGGAGCGCCGGCCAGCTGGAGGACGAGATCGCCCGCAACGGCTGG ATCACCGTCGACGCGAAGCCCGAGGTGATCTTCGAGACGCCGACCGAGCAGCGCTACGACAAGGCGCTGTCGCTGCTGGG CATCGACCCGCGCATGCTGAGCAGCGAAGCGGGCCATGCCTGA
Upstream 100 bases:
>100_bases GGCGCGCAGGTCCCGGCGGCACCACACCAGCGCGGCGTCGAGTGTTTTTCCGGAGGCCTTGTCCATGCGCCGGAGTGTGC CCGGTCACTACAATCGCCGC
Downstream 100 bases:
>100_bases GCCGGCCGGAGCCCCGCAGCCCCTGCAGACCCTGCTCGCTTTCGATTTCGGCCTCAAGCGCACCGGGGTGGCCACCGGCA ACACGCTGACGCGCAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGSDSATNLTNQFLIAMPGMADDNFAGSVVYLCEHTERGALGLVINKPSDIKLGRLFEKVDLPLDREELAEQPVYLGGPV QTERGFVLHERGEDDAADIDADGATYTSSLRIPGGMAMTTSKDVLEALANGAGPKRVLVTLGYAGWSAGQLEDEIARNGW ITVDAKPEVIFETPTEQRYDKALSLLGIDPRMLSSEAGHA
Sequences:
>Translated_200_residues MGSDSATNLTNQFLIAMPGMADDNFAGSVVYLCEHTERGALGLVINKPSDIKLGRLFEKVDLPLDREELAEQPVYLGGPV QTERGFVLHERGEDDAADIDADGATYTSSLRIPGGMAMTTSKDVLEALANGAGPKRVLVTLGYAGWSAGQLEDEIARNGW ITVDAKPEVIFETPTEQRYDKALSLLGIDPRMLSSEAGHA >Mature_199_residues GSDSATNLTNQFLIAMPGMADDNFAGSVVYLCEHTERGALGLVINKPSDIKLGRLFEKVDLPLDREELAEQPVYLGGPVQ TERGFVLHERGEDDAADIDADGATYTSSLRIPGGMAMTTSKDVLEALANGAGPKRVLVTLGYAGWSAGQLEDEIARNGWI TVDAKPEVIFETPTEQRYDKALSLLGIDPRMLSSEAGHA
Specific function: Unknown
COG id: COG1678
COG function: function code K; Putative transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0301 (AlgH) family [H]
Homologues:
Organism=Escherichia coli, GI87082187, Length=197, Percent_Identity=42.1319796954315, Blast_Score=160, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003774 [H]
Pfam domain/function: PF02622 DUF179 [H]
EC number: NA
Molecular weight: Translated: 21466; Mature: 21335
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDSATNLTNQFLIAMPGMADDNFAGSVVYLCEHTERGALGLVINKPSDIKLGRLFEKV CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHH DLPLDREELAEQPVYLGGPVQTERGFVLHERGEDDAADIDADGATYTSSLRIPGGMAMTT CCCCCHHHHHCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECC SKDVLEALANGAGPKRVLVTLGYAGWSAGQLEDEIARNGWITVDAKPEVIFETPTEQRYD HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEECCCCEEEECCCHHHHH KALSLLGIDPRMLSSEAGHA HHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure GSDSATNLTNQFLIAMPGMADDNFAGSVVYLCEHTERGALGLVINKPSDIKLGRLFEKV CCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHH DLPLDREELAEQPVYLGGPVQTERGFVLHERGEDDAADIDADGATYTSSLRIPGGMAMTT CCCCCHHHHHCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECC SKDVLEALANGAGPKRVLVTLGYAGWSAGQLEDEIARNGWITVDAKPEVIFETPTEQRYD HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEECCCCEEEECCCHHHHH KALSLLGIDPRMLSSEAGHA HHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA