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The map label for this gene is 124265886

Identifier: 124265886

GI number: 124265886

Start: 723968

End: 724399

Strand: Reverse

Name: 124265886

Synonym: Mpe_A0693

Alternate gene names: NA

Gene position: 724399-723968 (Counterclockwise)

Preceding gene: 124265887

Following gene: 124265885

Centisome position: 17.91

GC content: 60.88

Gene sequence:

>432_bases
ATGTCAAACGTTAGCCGCCAGACCATGCGCATCATCATCTCGCAGCTCTATGCATTCCTGGCTCTTGCGGCTGCCGCCTC
CGGAGTGCACGCTGCACCGGCGAACAAGTGCGTCATCAATGGCAGCGTCACGTATCAGCAGAGCCCCTGCCCTTCGACTC
AACCTCGAAAGGACCCCACGCTGGAGGAGTTGAACGCCGCAGAAAGAGCACGCCGTGCCGCGGCTGCCTCCTCCGCTGCG
GCGGAAACCCCCAGAACAGCCTCTTCAGCGCCAGCCGCCGTCTCTAGCAGCTTCCGCTGCGACGGACGAAAGTACTGCTC
TCAAATGAGCTCGTGTACCGAAGCCAAGTACTTCCTCGCCAATTGTCCCGGTGTGAAGATGGACGGCGACAACGATGGCA
TCCCCTGCGAAGAGCAGTGGTGCAGGCCTTAA

Upstream 100 bases:

>100_bases
ACCAAGCTCTCGGAACTTCAGAAGTGAGTGGCAGTGGTGTGCGCTGGTCTAACCCATCCCATCGAGAGGACTCGCCCCGG
CAAGCCGGGTCATGCAGCTC

Downstream 100 bases:

>100_bases
AGGTCCGCCGGTAGTTGGCTCAAGAGTTGCGGCCTAACCCTTCGCTCGAGGCCGATCTCCACCGGCCCGCTCAGCTCAAT
CGTTGGGCGCCACAGGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cold Shock Domain-Contain Protein; Cold Shock Domain Family Protein; Cold Shock Domain-Containing Protein CspD; Cold Shock Domain-Containing Protein; Excalibur; Cold Shock Family Protein; Cold Shock/Excaliber Domain-Containing Protein CspD

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSNVSRQTMRIIISQLYAFLALAAAASGVHAAPANKCVINGSVTYQQSPCPSTQPRKDPTLEELNAAERARRAAAASSAA
AETPRTASSAPAAVSSSFRCDGRKYCSQMSSCTEAKYFLANCPGVKMDGDNDGIPCEEQWCRP

Sequences:

>Translated_143_residues
MSNVSRQTMRIIISQLYAFLALAAAASGVHAAPANKCVINGSVTYQQSPCPSTQPRKDPTLEELNAAERARRAAAASSAA
AETPRTASSAPAAVSSSFRCDGRKYCSQMSSCTEAKYFLANCPGVKMDGDNDGIPCEEQWCRP
>Mature_142_residues
SNVSRQTMRIIISQLYAFLALAAAASGVHAAPANKCVINGSVTYQQSPCPSTQPRKDPTLEELNAAERARRAAAASSAAA
ETPRTASSAPAAVSSSFRCDGRKYCSQMSSCTEAKYFLANCPGVKMDGDNDGIPCEEQWCRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15167; Mature: 15036

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVSRQTMRIIISQLYAFLALAAAASGVHAAPANKCVINGSVTYQQSPCPSTQPRKDPT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCC
LEELNAAERARRAAAASSAAAETPRTASSAPAAVSSSFRCDGRKYCSQMSSCTEAKYFLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
NCPGVKMDGDNDGIPCEEQWCRP
CCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNVSRQTMRIIISQLYAFLALAAAASGVHAAPANKCVINGSVTYQQSPCPSTQPRKDPT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCC
LEELNAAERARRAAAASSAAAETPRTASSAPAAVSSSFRCDGRKYCSQMSSCTEAKYFLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
NCPGVKMDGDNDGIPCEEQWCRP
CCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA