| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is fabG [H]
Identifier: 124265870
GI number: 124265870
Start: 713092
End: 713781
Strand: Reverse
Name: fabG [H]
Synonym: Mpe_A0677
Alternate gene names: 124265870
Gene position: 713781-713092 (Counterclockwise)
Preceding gene: 124265871
Following gene: 124265869
Centisome position: 17.65
GC content: 73.77
Gene sequence:
>690_bases ATGACAGGAAACCCTCTGAGCCTGAGCGGACGGCGTGCGCTGATCACCCAGGCCGATGCCTTCATGGGGCCGGCGCTGTG CGAGGTGTTCGCCGCGCACGGCGCAGACGTGATCGCCGACACCTCACCGCTGGCCGACGCCGATGCGCCGGCGCGGGTGG TGGCCGCGGCCGGCGTGGTGGACCTGCTGGTGCTCAACCTGGCGATCCCGGCGCCGCGCACCAGCGCGGTGGCGTCGTCC GATGCCGAGTGGGCGGCGGTGTTCGGCGCGCTGGTCGACCCGCTGCCGCGGCTGCTGCGCGCGGTGCTGCCGCAGATGAT CGCGCGGCGCGCGGGCCGGGTGGTGCTGATGGGCAGCGCCGCGGCGCTGCGCGGCATGAAGAACAGCTCGACCTACAGCG CCGCGCGCGGCGCGCAGCTGGCCTATGTGCAGGCGGTCGGCGTCGAGGTGGCGCCGCACGGCGTGCGGGTGAACGCGATC GCGCAGAACTTCGTCGACAACCCGACCTACTTCCCGCCCGAGGTGCAGGCCGACCCGCGCTTCCAGGAGCGCCTGAAGCG CGAGGTGCCGCTGGGCCGCCTGGTCGGCGCGCGCGAGGATGCCGAGTTCGCCGCCTACCTGTGCAGCGAGCCGGCCGACT GCTTCGTGGGCCAGGTGTTCCCGGTGTGTGGAGGCTGGGTGCCGCGATGA
Upstream 100 bases:
>100_bases AGCCCGCTCGAGCACCAGTGCCAGGCGCTGTGGGCCGAGACGCAGCGCGTGATGCACCAACCGCGCCGCTGACCGACACC GTGACCGAAAGGACCGACGC
Downstream 100 bases:
>100_bases GGCTGACCGACCTGGGCCCGCTGCCGCTGACGCTGATCGCGTCGCTGCTGCTCGCCGTGGTGCTGCTGGCGGTGCGTGTG TTCGTGATGCAGCGCGTGCA
Product: putative oxidoreductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTGNPLSLSGRRALITQADAFMGPALCEVFAAHGADVIADTSPLADADAPARVVAAAGVVDLLVLNLAIPAPRTSAVASS DAEWAAVFGALVDPLPRLLRAVLPQMIARRAGRVVLMGSAAALRGMKNSSTYSAARGAQLAYVQAVGVEVAPHGVRVNAI AQNFVDNPTYFPPEVQADPRFQERLKREVPLGRLVGAREDAEFAAYLCSEPADCFVGQVFPVCGGWVPR
Sequences:
>Translated_229_residues MTGNPLSLSGRRALITQADAFMGPALCEVFAAHGADVIADTSPLADADAPARVVAAAGVVDLLVLNLAIPAPRTSAVASS DAEWAAVFGALVDPLPRLLRAVLPQMIARRAGRVVLMGSAAALRGMKNSSTYSAARGAQLAYVQAVGVEVAPHGVRVNAI AQNFVDNPTYFPPEVQADPRFQERLKREVPLGRLVGAREDAEFAAYLCSEPADCFVGQVFPVCGGWVPR >Mature_228_residues TGNPLSLSGRRALITQADAFMGPALCEVFAAHGADVIADTSPLADADAPARVVAAAGVVDLLVLNLAIPAPRTSAVASSD AEWAAVFGALVDPLPRLLRAVLPQMIARRAGRVVLMGSAAALRGMKNSSTYSAARGAQLAYVQAVGVEVAPHGVRVNAIA QNFVDNPTYFPPEVQADPRFQERLKREVPLGRLVGAREDAEFAAYLCSEPADCFVGQVFPVCGGWVPR
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=201, Percent_Identity=27.363184079602, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=24.3027888446215, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=26.0330578512397, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI66933014, Length=169, Percent_Identity=25.4437869822485, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=28.1632653061224, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=29.0836653386454, Blast_Score=82, Evalue=3e-17, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=27.8225806451613, Blast_Score=78, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 23989; Mature: 23858
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNPLSLSGRRALITQADAFMGPALCEVFAAHGADVIADTSPLADADAPARVVAAAGVV CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHH DLLVLNLAIPAPRTSAVASSDAEWAAVFGALVDPLPRLLRAVLPQMIARRAGRVVLMGSA HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECH AALRGMKNSSTYSAARGAQLAYVQAVGVEVAPHGVRVNAIAQNFVDNPTYFPPEVQADPR HHHHCCCCCCCHHHHCCCCEEEEEEECCEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCH FQERLKREVPLGRLVGAREDAEFAAYLCSEPADCFVGQVFPVCGGWVPR HHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TGNPLSLSGRRALITQADAFMGPALCEVFAAHGADVIADTSPLADADAPARVVAAAGVV CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHH DLLVLNLAIPAPRTSAVASSDAEWAAVFGALVDPLPRLLRAVLPQMIARRAGRVVLMGSA HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECH AALRGMKNSSTYSAARGAQLAYVQAVGVEVAPHGVRVNAIAQNFVDNPTYFPPEVQADPR HHHHCCCCCCCHHHHCCCCEEEEEEECCEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCH FQERLKREVPLGRLVGAREDAEFAAYLCSEPADCFVGQVFPVCGGWVPR HHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1556094; 8905232; 9278503; 1314802 [H]