| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yhjG [H]
Identifier: 124265859
GI number: 124265859
Start: 701291
End: 703384
Strand: Direct
Name: yhjG [H]
Synonym: Mpe_A0666
Alternate gene names: 124265859
Gene position: 701291-703384 (Clockwise)
Preceding gene: 124265854
Following gene: 124265863
Centisome position: 17.34
GC content: 73.4
Gene sequence:
>2094_bases ATGGCGGCGACGGCCCGGCCGCGTCACGCTCGCAGTTCGCGCCCGCCCCTCCGCGCCGCGCGCCGCCGAGATCCGATGCC GACCCGTTTCCCGTCCCTGCTGCGCCGTCTGGCGATCGTCTTGCTCGCGCTGGCGATCGCGCTCGCGGTCGCGTGGATCG TGCCCTGGAAGCTCAACCCGCTGCGGGGCTGGATCGGTGAGCGGGTGCAGGCGGCCACCGGCCGCACGCTGGTGATCGAC GGCGACCTGTGGTGGCGCTTCGGTCGCCATGGACGGCTCACCGCGGAGGGCCTGCGGATCGGCAACCCGGCCTGGGCCGG GCGCGCCGATTTCCTGCAAGCGCGCCGCGTCGAGCTTGAGGTGGCACTGTGGCCGCTGCTGCGCGGGCGCATCGTGCTGC CGCACGTGCGCGCCGAGCAGCCCGACCTGTGGCTGGAGCGCGCGCCGGACGGCCGCCGCACCTGGCGGCTGGAGCGCGCG CAGAACGACGGGAAGCGCACCCTGTTCCTTGGCAGCGTGGCGCTGGACCGCGGCGTCGTCACCTATGCCGAAACCGCGCG GCGCGCCGAGGTGCGCTTCGCGGTGCAGACCCGCGTCGACGGGGGTCGCCCGCGCCTGCAGGCGGAGGCCAGTGGCCGCT GGAACGACCTGCCGGTGAAGGGCCGCGCGGAAGGCGACGAGGTGCTGCAGCTGCGCAACGAGGACCAGCCCTATGCCTTC GAGCTCGACGGGCGCATCGGCGGCACCGCGATCGCCGCGAACGGCAGCATCGTGCGGCCGCGCGAGCCGCAGCGCGCCGA CCTGCGGATCGAGCTCGCCGGCAGCTCGCTCGGCGAATGGCACCGCATTGCCGGAGTCGGCCTGCCCGACACGCCTCCCT ACAAGACCGAGGGACGGCTGCGCTTCGATGGCACACGCTGGACCTACGAGGACTTCAAGGCGGTTGTCGGCCGCAGCGAC CTCGGCGGCCGTGTCGCCTTCGAGCGCCGTGCGCCGCGCTCGCTGTTCAGCGGCGAGCTGGTGTCGAGCTCGCTCGACCT GGCCGATTTCGGCCCGGTGATCGGCAAGGCACGCCCGGCCGCAAGAAGGGCCGTGCCGGCCACGAGCGCGAAGAAGACAC CGGCCGCCGCGGCCGCCGCGTCCGCTGCGTCGGCGCCGTCGTCCGACGGCCCGCGCCGCGTGCTGCCCCAGCAGCGCTTC GACGCCGACAAGTGGGGCACGCTCGACGCCGAGGTGCATTTCGTCGGCCAGGAGGTGCGCAACCTCGGCAGCTTCCCGAT CGGCAAGCTCGACTTCCGCGTGAAGATGGACGATCGTCGCCTGACGCTCTCGCCGCTGCTGCTGCAGCTCGGCGGCGGGC GGCTCGACGGCGACCTGCACATCGACGGCCGCGTGCAGCCGATGGCGGCGCAGCTCGACCTGAAGCTGCGCCGCCTGCAG CTCGACACGCTGCTGCCGCAGCTGCGCAGCACCAAGAGCGCGCTGGGCGCGATCAACGGTCGGCTCGTGCTCGCCGGCCA GGGCCAGTCGTTCGCCCAGATGCTGGGCAGCGCCGATGGCGAGGCCCAGCTCGCGATGGGCCGCGGGCAGGTCAGCAACC TGCTGCTCGAGTTGCTGGACCTCGACGCCTACGAGGCACTGAGCTTCCTGGTGCGAGGTGACCGCTCGGTCGAGGTGCGC TGCGCGCTGGTCGACGTCGGCTTCCAGCGCGGGCAGATGAGCACGCGCGCCGCGGTGTTCGACACCGTGGACACGGTGAT CGAGGCGCGCGGCCGGGCCGACTTCACGAACGAGCAGCTCGACCTGCGCGTCACGCCCACGGCCAAGGACCTGAGCCCGC TGAGCGCCCGCGTGCCGTTCGACGTGAAGGGCCCGTTCGCGAAGCCGCAGGTGTCGCCCGACAAGGCGCGACTGCTGGCG CGCGGCGGTGGCGCATTGCTGCTCGGACTGATCAACCCGCTCGCCGCGATCATCCCGCTGATCGAGACCGGCCCCGGCGA GGACCGCGACTGCCGGGCCCTGATGGCGCGCGCCACACAGGAGGGTCTGCCGCCCGGGGCCCCGCCGGGGCCCGCGGATC AGAAGAGGAAATAG
Upstream 100 bases:
>100_bases CCGCGCGCGAGCAGTTTGTTGAGGGTCAGCATGGCGCGAGTATGCCCCTGGCTGCGCGCCACCGTAGGCCACGGCCTACA GGCCGACCCGCCGCCGGCCG
Downstream 100 bases:
>100_bases CGCTGCGTCATCGGCAGGGCGGTGGCCGGCTCGCAGGTCAGCAGCTGGCCGTCGGCGCGCACCTGGTAGGTCTGGGCGTC GACCTCCATGCGCGGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MAATARPRHARSSRPPLRAARRRDPMPTRFPSLLRRLAIVLLALAIALAVAWIVPWKLNPLRGWIGERVQAATGRTLVID GDLWWRFGRHGRLTAEGLRIGNPAWAGRADFLQARRVELEVALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERA QNDGKRTLFLGSVALDRGVVTYAETARRAEVRFAVQTRVDGGRPRLQAEASGRWNDLPVKGRAEGDEVLQLRNEDQPYAF ELDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSLGEWHRIAGVGLPDTPPYKTEGRLRFDGTRWTYEDFKAVVGRSD LGGRVAFERRAPRSLFSGELVSSSLDLADFGPVIGKARPAARRAVPATSAKKTPAAAAAASAASAPSSDGPRRVLPQQRF DADKWGTLDAEVHFVGQEVRNLGSFPIGKLDFRVKMDDRRLTLSPLLLQLGGGRLDGDLHIDGRVQPMAAQLDLKLRRLQ LDTLLPQLRSTKSALGAINGRLVLAGQGQSFAQMLGSADGEAQLAMGRGQVSNLLLELLDLDAYEALSFLVRGDRSVEVR CALVDVGFQRGQMSTRAAVFDTVDTVIEARGRADFTNEQLDLRVTPTAKDLSPLSARVPFDVKGPFAKPQVSPDKARLLA RGGGALLLGLINPLAAIIPLIETGPGEDRDCRALMARATQEGLPPGAPPGPADQKRK
Sequences:
>Translated_697_residues MAATARPRHARSSRPPLRAARRRDPMPTRFPSLLRRLAIVLLALAIALAVAWIVPWKLNPLRGWIGERVQAATGRTLVID GDLWWRFGRHGRLTAEGLRIGNPAWAGRADFLQARRVELEVALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERA QNDGKRTLFLGSVALDRGVVTYAETARRAEVRFAVQTRVDGGRPRLQAEASGRWNDLPVKGRAEGDEVLQLRNEDQPYAF ELDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSLGEWHRIAGVGLPDTPPYKTEGRLRFDGTRWTYEDFKAVVGRSD LGGRVAFERRAPRSLFSGELVSSSLDLADFGPVIGKARPAARRAVPATSAKKTPAAAAAASAASAPSSDGPRRVLPQQRF DADKWGTLDAEVHFVGQEVRNLGSFPIGKLDFRVKMDDRRLTLSPLLLQLGGGRLDGDLHIDGRVQPMAAQLDLKLRRLQ LDTLLPQLRSTKSALGAINGRLVLAGQGQSFAQMLGSADGEAQLAMGRGQVSNLLLELLDLDAYEALSFLVRGDRSVEVR CALVDVGFQRGQMSTRAAVFDTVDTVIEARGRADFTNEQLDLRVTPTAKDLSPLSARVPFDVKGPFAKPQVSPDKARLLA RGGGALLLGLINPLAAIIPLIETGPGEDRDCRALMARATQEGLPPGAPPGPADQKRK >Mature_696_residues AATARPRHARSSRPPLRAARRRDPMPTRFPSLLRRLAIVLLALAIALAVAWIVPWKLNPLRGWIGERVQAATGRTLVIDG DLWWRFGRHGRLTAEGLRIGNPAWAGRADFLQARRVELEVALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERAQ NDGKRTLFLGSVALDRGVVTYAETARRAEVRFAVQTRVDGGRPRLQAEASGRWNDLPVKGRAEGDEVLQLRNEDQPYAFE LDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSLGEWHRIAGVGLPDTPPYKTEGRLRFDGTRWTYEDFKAVVGRSDL GGRVAFERRAPRSLFSGELVSSSLDLADFGPVIGKARPAARRAVPATSAKKTPAAAAAASAASAPSSDGPRRVLPQQRFD ADKWGTLDAEVHFVGQEVRNLGSFPIGKLDFRVKMDDRRLTLSPLLLQLGGGRLDGDLHIDGRVQPMAAQLDLKLRRLQL DTLLPQLRSTKSALGAINGRLVLAGQGQSFAQMLGSADGEAQLAMGRGQVSNLLLELLDLDAYEALSFLVRGDRSVEVRC ALVDVGFQRGQMSTRAAVFDTVDTVIEARGRADFTNEQLDLRVTPTAKDLSPLSARVPFDVKGPFAKPQVSPDKARLLAR GGGALLLGLINPLAAIIPLIETGPGEDRDCRALMARATQEGLPPGAPPGPADQKRK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=681, Percent_Identity=29.3685756240822, Blast_Score=291, Evalue=1e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 76092; Mature: 75961
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATARPRHARSSRPPLRAARRRDPMPTRFPSLLRRLAIVLLALAIALAVAWIVPWKLNP CCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LRGWIGERVQAATGRTLVIDGDLWWRFGRHGRLTAEGLRIGNPAWAGRADFLQARRVELE HHHHHHHHHHHCCCCEEEEECHHHEEECCCCCEEECCEEECCCCCCCHHHHHHHHHEEEE VALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERAQNDGKRTLFLGSVALDRGVV EEEEHHHCCCEEECCCCCCCCCCCEECCCCCCCEEEEHHHCCCCCEEEEEEEEHHCCCCC TYAETARRAEVRFAVQTRVDGGRPRLQAEASGRWNDLPVKGRAEGDEVLQLRNEDQPYAF HHHHHHHHHHEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEE ELDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSLGEWHRIAGVGLPDTPPYKTEGRL EECCCCCCEEEECCCCEECCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEE RFDGTRWTYEDFKAVVGRSDLGGRVAFERRAPRSLFSGELVSSSLDLADFGPVIGKARPA EECCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHCCHHHHCCCCHHHHCHHHCCCCCH ARRAVPATSAKKTPAAAAAASAASAPSSDGPRRVLPQQRFDADKWGTLDAEVHFVGQEVR HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECHHHH NLGSFPIGKLDFRVKMDDRRLTLSPLLLQLGGGRLDGDLHIDGRVQPMAAQLDLKLRRLQ HCCCCCCCCEEEEEEECCCEEEHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH LDTLLPQLRSTKSALGAINGRLVLAGQGQSFAQMLGSADGEAQLAMGRGQVSNLLLELLD HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHC LDAYEALSFLVRGDRSVEVRCALVDVGFQRGQMSTRAAVFDTVDTVIEARGRADFTNEQL CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE DLRVTPTAKDLSPLSARVPFDVKGPFAKPQVSPDKARLLARGGGALLLGLINPLAAIIPL EEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHH IETGPGEDRDCRALMARATQEGLPPGAPPGPADQKRK HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AATARPRHARSSRPPLRAARRRDPMPTRFPSLLRRLAIVLLALAIALAVAWIVPWKLNP CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LRGWIGERVQAATGRTLVIDGDLWWRFGRHGRLTAEGLRIGNPAWAGRADFLQARRVELE HHHHHHHHHHHCCCCEEEEECHHHEEECCCCCEEECCEEECCCCCCCHHHHHHHHHEEEE VALWPLLRGRIVLPHVRAEQPDLWLERAPDGRRTWRLERAQNDGKRTLFLGSVALDRGVV EEEEHHHCCCEEECCCCCCCCCCCEECCCCCCCEEEEHHHCCCCCEEEEEEEEHHCCCCC TYAETARRAEVRFAVQTRVDGGRPRLQAEASGRWNDLPVKGRAEGDEVLQLRNEDQPYAF HHHHHHHHHHEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEE ELDGRIGGTAIAANGSIVRPREPQRADLRIELAGSSLGEWHRIAGVGLPDTPPYKTEGRL EECCCCCCEEEECCCCEECCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEE RFDGTRWTYEDFKAVVGRSDLGGRVAFERRAPRSLFSGELVSSSLDLADFGPVIGKARPA EECCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHCCHHHHCCCCHHHHCHHHCCCCCH ARRAVPATSAKKTPAAAAAASAASAPSSDGPRRVLPQQRFDADKWGTLDAEVHFVGQEVR HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECHHHH NLGSFPIGKLDFRVKMDDRRLTLSPLLLQLGGGRLDGDLHIDGRVQPMAAQLDLKLRRLQ HCCCCCCCCEEEEEEECCCEEEHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH LDTLLPQLRSTKSALGAINGRLVLAGQGQSFAQMLGSADGEAQLAMGRGQVSNLLLELLD HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHC LDAYEALSFLVRGDRSVEVRCALVDVGFQRGQMSTRAAVFDTVDTVIEARGRADFTNEQL CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE DLRVTPTAKDLSPLSARVPFDVKGPFAKPQVSPDKARLLARGGGALLLGLINPLAAIIPL EEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHH IETGPGEDRDCRALMARATQEGLPPGAPPGPADQKRK HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]