| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yceF [C]
Identifier: 124265826
GI number: 124265826
Start: 668257
End: 668874
Strand: Reverse
Name: yceF [C]
Synonym: Mpe_A0633
Alternate gene names: 124265826
Gene position: 668874-668257 (Counterclockwise)
Preceding gene: 124265839
Following gene: 124265825
Centisome position: 16.54
GC content: 72.65
Gene sequence:
>618_bases ATGGCGCCCATGATCCCCACGCCGCCGCCTCGCCTGATCCTCGGCTCCACCTCGCGCTACCGGCGCGAACTGTTGATGCG CCTGCGCGTGCCCTTCGAGGTGGACAGTCCGCGCGTCGACGAGACGCCCCTCGCCGGCGAAGCCCCTGCCGCGCTGGCCG AGCGCCTGGCGCTCGCCAAGGCGCACGAGGTGGCGGCGCGCCATGCCGACGCGGTCGTGATCGGCTCCGACCAGGTGGCC GACCTGGACGGCACGCCGATCGGCAAGCCCGGCGGGCACCAGCGCGCGGTCGAGCAACTGCGTTCGATGAGTGGCCGCAC CGTGGTCTTCCAGACGGCGCTGGCGGTGGTGCGACCGGCCACCGGCTTCGAGCGACTGCTGCGTGTGCCGGTGGCGGTGC GTTTCAGGGCGCTGGGCGACGCGGAGATCGAGGCCTACCTGCGCGCAGAGCAGCCCTACGACTGCGCCGGCAGCGCCAAG TCCGAAGGCCTGGGTATCGCGTTGCTCGACGCGATCGAATCCGACGACCCGACCGCCCTGATCGGCCTGCCGCTGATCGC CACCGCCAAGCTGCTGCGCGAGGCCGGGATCGACGTGCTGCTGCGGAGCCCGGGATGA
Upstream 100 bases:
>100_bases ACAAGCTGGCTGCGTCCGCCGCCAGGCCGGCGACGTTCAGGCGCAAGGGGTTCTGTTCGCTCGGCTTCATCGCGCCCGGA GTTTATGCGCCGCACCGACA
Downstream 100 bases:
>100_bases AGGGCCGGCTGATCCTGGTGCCGAACACCCTGGACCTCGGCACGCTGGTTGGCAGCCTGCCCCCACCCGATCTCCGCGAG GTGCTGCCGCAGGGCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAPMIPTPPPRLILGSTSRYRRELLMRLRVPFEVDSPRVDETPLAGEAPAALAERLALAKAHEVAARHADAVVIGSDQVA DLDGTPIGKPGGHQRAVEQLRSMSGRTVVFQTALAVVRPATGFERLLRVPVAVRFRALGDAEIEAYLRAEQPYDCAGSAK SEGLGIALLDAIESDDPTALIGLPLIATAKLLREAGIDVLLRSPG
Sequences:
>Translated_205_residues MAPMIPTPPPRLILGSTSRYRRELLMRLRVPFEVDSPRVDETPLAGEAPAALAERLALAKAHEVAARHADAVVIGSDQVA DLDGTPIGKPGGHQRAVEQLRSMSGRTVVFQTALAVVRPATGFERLLRVPVAVRFRALGDAEIEAYLRAEQPYDCAGSAK SEGLGIALLDAIESDDPTALIGLPLIATAKLLREAGIDVLLRSPG >Mature_204_residues APMIPTPPPRLILGSTSRYRRELLMRLRVPFEVDSPRVDETPLAGEAPAALAERLALAKAHEVAARHADAVVIGSDQVAD LDGTPIGKPGGHQRAVEQLRSMSGRTVVFQTALAVVRPATGFERLLRVPVAVRFRALGDAEIEAYLRAEQPYDCAGSAKS EGLGIALLDAIESDDPTALIGLPLIATAKLLREAGIDVLLRSPG
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=192, Percent_Identity=48.4375, Blast_Score=176, Evalue=9e-46, Organism=Escherichia coli, GI1789646, Length=182, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21809; Mature: 21678
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPMIPTPPPRLILGSTSRYRRELLMRLRVPFEVDSPRVDETPLAGEAPAALAERLALAK CCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AHEVAARHADAVVIGSDQVADLDGTPIGKPGGHQRAVEQLRSMSGRTVVFQTALAVVRPA HHHHHHHHCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCC TGFERLLRVPVAVRFRALGDAEIEAYLRAEQPYDCAGSAKSEGLGIALLDAIESDDPTAL HHHHHHHHCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCEEE IGLPLIATAKLLREAGIDVLLRSPG EHHHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure APMIPTPPPRLILGSTSRYRRELLMRLRVPFEVDSPRVDETPLAGEAPAALAERLALAK CCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AHEVAARHADAVVIGSDQVADLDGTPIGKPGGHQRAVEQLRSMSGRTVVFQTALAVVRPA HHHHHHHHCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCC TGFERLLRVPVAVRFRALGDAEIEAYLRAEQPYDCAGSAKSEGLGIALLDAIESDDPTAL HHHHHHHHCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCEEE IGLPLIATAKLLREAGIDVLLRSPG EHHHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA