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The map label for this gene is ybaO [C]

Identifier: 124265752

GI number: 124265752

Start: 591078

End: 591566

Strand: Reverse

Name: ybaO [C]

Synonym: Mpe_A0559

Alternate gene names: 124265752

Gene position: 591566-591078 (Counterclockwise)

Preceding gene: 124265757

Following gene: 124265749

Centisome position: 14.63

GC content: 70.35

Gene sequence:

>489_bases
GTGAACAAGATCACGCTGGATCCCCTCGACCTCCGGCTGCTCGCGCAACTGCAGCGCGACGCGTCGCTCTCGAATCAGGC
GCTGGCGGCCGAGGTCCACGTGGCCACGGCCACCACGCACCGCCGCGTCCGACGCTTCCATGCGCTGGGATTGATCGAGC
GCGTGACCGCCCAGCTGTCGCCGCAGCGCCTGGCCGACGCCGGCCTGCCGCAACTGCATGCGCTGCTCGAGGTCTCGCTC
GACGTGCAGACCAGCGAGGGCCTGGACGCGTTCGAGGTGCGCGCCGTGGCCGACGCCAGCGTCCAGCAGTGCTGGCGGGT
CTCTCCAGGGCCTGACTTCATGCTGGTGGTGGGGGTGCGCGACATGGAGGCCTACCAGGCCTTCACCGCGCGGCTGCTGA
CGGCCGATGCCAACGTGCGCAACGTGCGGGCCTTCTTCAGCATCAAGCGCGCGAAGTTCGGCAGCGAACTGCCGCTGCCC
GCGCGGTGA

Upstream 100 bases:

>100_bases
ATATGCTTTCTAAATTCAAAATAAAACGGCATAAAAATCTCAAAACTTTCTAGAATGAAAATTTAGAGCAAAGTTTAGTT
AATTAGATGCAATTTTTTTC

Downstream 100 bases:

>100_bases
GTTGCGCCGACCGGCGAGCGCCCCGCGGCAACCACTCCTCAGTTCGGCGCGGATGCCGCGCCTTCCGCCGCGGAAAGCGA
CTTGTGCAGACCGGCCGGCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNKITLDPLDLRLLAQLQRDASLSNQALAAEVHVATATTHRRVRRFHALGLIERVTAQLSPQRLADAGLPQLHALLEVSL
DVQTSEGLDAFEVRAVADASVQQCWRVSPGPDFMLVVGVRDMEAYQAFTARLLTADANVRNVRAFFSIKRAKFGSELPLP
AR

Sequences:

>Translated_162_residues
MNKITLDPLDLRLLAQLQRDASLSNQALAAEVHVATATTHRRVRRFHALGLIERVTAQLSPQRLADAGLPQLHALLEVSL
DVQTSEGLDAFEVRAVADASVQQCWRVSPGPDFMLVVGVRDMEAYQAFTARLLTADANVRNVRAFFSIKRAKFGSELPLP
AR
>Mature_162_residues
MNKITLDPLDLRLLAQLQRDASLSNQALAAEVHVATATTHRRVRRFHALGLIERVTAQLSPQRLADAGLPQLHALLEVSL
DVQTSEGLDAFEVRAVADASVQQCWRVSPGPDFMLVVGVRDMEAYQAFTARLLTADANVRNVRAFFSIKRAKFGSELPLP
AR

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=154, Percent_Identity=30.5194805194805, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787116, Length=157, Percent_Identity=28.6624203821656, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17869; Mature: 17869

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKITLDPLDLRLLAQLQRDASLSNQALAAEVHVATATTHRRVRRFHALGLIERVTAQLS
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PQRLADAGLPQLHALLEVSLDVQTSEGLDAFEVRAVADASVQQCWRVSPGPDFMLVVGVR
HHHHHHCCCHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
DMEAYQAFTARLLTADANVRNVRAFFSIKRAKFGSELPLPAR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKITLDPLDLRLLAQLQRDASLSNQALAAEVHVATATTHRRVRRFHALGLIERVTAQLS
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PQRLADAGLPQLHALLEVSLDVQTSEGLDAFEVRAVADASVQQCWRVSPGPDFMLVVGVR
HHHHHHCCCHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
DMEAYQAFTARLLTADANVRNVRAFFSIKRAKFGSELPLPAR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]