| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265730
Identifier: 124265730
GI number: 124265730
Start: 573649
End: 576027
Strand: Reverse
Name: 124265730
Synonym: Mpe_A0537
Alternate gene names: NA
Gene position: 576027-573649 (Counterclockwise)
Preceding gene: 124265731
Following gene: 124265728
Centisome position: 14.24
GC content: 65.2
Gene sequence:
>2379_bases ATGGCCGGTGATTTGAAGGCGCAGATCGAGATCAGTGCCGACTCCAAGGGCGTCGAGAGCGGCGTCGGCAAGGCGAAGAA GAGCCTCGCCAGCCTGGGCGTCACGGCAGACGCGACGGGTAAGCGCGCTGCGGACGGGTTCGACAAGATCGGCACCGCCA GTGCCAGCGCCCGCCGCTCGATCGATGCAACGGTCGCTCGACTTCAGATGCAGGCCGCTACGGTCAACAAGTCGACTGTG GATGCGAAGCTGTTCGAACTCGCGCAGAGAGGCGCCAGCCGCTCCCAGCTTGTGGCCGCTGAAGCCGCCCTTCGCTCTGT CGCCGCCAGCAAGGCGCAAGCCGAAGCCCTGGTGAAGTCCGAGGCGGCCTACAACTCCGCGCGGGCCTCAGCGACCCGCT ACGGGGCCTATCTCGCCACGCTGAGTGTCGCTGCCGGTGCTGCGGTCGCCGCCATCATCAAGCGCTCCATCAACGCCCAA GATGCCTTCAACGATCTCAAGGACGCCACAGGCGCCAGCATCGAGAACATCAGCGCCCTGGACCGCATCGCCCGCGAGAC CGGGGGTGGCTTCGAAAGCATGTCGTCTACGCTGGTGAAGTTCAACCAGGTGCTGAGCAAGACCGATGACGACTCCGCCG AAGCCGCCCGAATCCTCAAGGCGCTGGGCCTGAATGCAGAGGAGCTGCGGAAGATCGATCCCGCCGAAGCCCTGCGACAA ACCGCGGTCGCCCTGGCCAAGGTCGCTGATGACGGCAGTCGGGCCCGTGCGATTCAGGTGCTGTTTGGGAAGAGCGTCCG CGAGGCGGCGCCGCTGCTCAACGACCTGGCCGAGAAGACCGAGCTTGTCGCCACCACGACCACGGCGGCAGCGCTCAAGG CCGAAGACTTCAACAAGAAGATCTTCCAGATCAAGGCCAACGCGGAGGACGCGGCTCGCATCCTCGCTTCGAGCCTGATC CCGACCGTCAGCAACTTGGCGGACGAGTTCCTGGTGGGCATGAAGCACGCCGACGGTCTGCTCGACGCCATCATCACCTT CGGCACGATCAACCCGTTCAAGACGCAGGCCGGCAACCTCAAGTCCTTGCGCGAAGAACTGGCCGGCCTGGAGGGAGACC GGCAGCGTTACGTGCGTGCGGGCTCCGACACCCGAGCCATCGACGACGCCATCAGGAACGCGCGCAAGCAGATCGATTTC CTCAGTGAACTGCAGCAGCGCCAAGCGCTTCAGGGTGTTGGTGACACCAGCGATGCGCTCTCGCGCCGCCTGGCCCCGTC CGCCGCGCCCTCGCTAAAGATCCCCGACAAGCCGCCTCGCTCCACCGGAAGCAAGGCCGACCCGCAGGCCGAGGCCAAGC GCTACCTGGAGAGCCTCCAAAAGCAGCTTGAGGCCACCCAGAACCTGACCATTTCAGAGCAGACGCTGAGGGATCTGCAG ATGGATCGGTTGGGCAAGGTGTCGCCTGCCCTGCGCGAGGCCCTGCTGTCGACGGCTCAACAAGTCGACCTGGCGCGCGA TTGGACGAAGGCCCTGGAGGACGCGGCACAGGCTCGCGAAGAGGCTTCACGGGTTCAACAGCGGGCAGATGAGGCCGCGG TCGCGAGCGTGGCCCAGATGATCGAGCAGAACCAGGCGCTCAAGGACGAGATCGCCCTGATCGGTGCTTCGATCGGTCAG CGCGTCGCGATCGAGAAGGCCCGCATCAGCTCGGCCATCGCGATCAAAGAGGAAACGCTCGCACAACTGCAGTCCGTCGG AGCCAGCAAGGTCGTCATCGAATCGCTGCAGAAGGAGATCGCCCTGCTTCGCGAGCGGCAAGGCCTCATCGACGATCGTG GCGCAGCCGAGAAGGTGGCGGCCGAAGCCGAGAAGGCGGGCGACGCGGCCAAGGAGCTGGGCCTGACATTCTCATCGGCC TTCGAAGACGCGATCGTCGGCGGCAAGGGCCTTCGCGACATCCTCAAGGGCGTGGAACAGGATCTGTTGCGGCTGGCGGT CCGCAAGGGGATCACTGAGCCCTTCGCCGATGCCGCTGAAGGGTTCTTCAAGAACTCAGGTGAAGGCGGGTGGGGATCGA TCCTCAGCGCCGTCGGAAGCTTCTTCGGAGGCGGTCGTGCGATCGGCGGCCCAGTGTCAGCCGGCAAGATGTACCGCGTT AACGAGCGGCGCCCTGAGGTCCTTGACGTGGGCGGCCAGCAGTTCCTGATGATGGGCAATCAGTCGGGCAAGGTGCAGTC CGCCGGTACGAAGGAGCAGAGCGTCGTTGTCACCAACAACTTCACGCTGCACCAGCCGGCAAGTCGCGAGACTCAGCAGC AGATCGCGTCAAGGGCTGGCGCGGCGATCACGGCCGCGATGCGGCGCGGTACGGCATGA
Upstream 100 bases:
>100_bases TAAGTCGTGAGTCGCCGAGTCCATGAAAGCAACCGCGACAGCCCGCAGAGCCCTCTTTCGGGGCGCGTGGCGGGCACCCT AACTTGAAAGGTGGTTGACG
Downstream 100 bases:
>100_bases CGATCAAGGAACTGTGCCAGATCGAGGATGACCGGCCAGCGGCATAGCGACGGATGTTCTATCCGTCAATCATTGCTCAC CTGAAATCAATCAAATGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 791
Protein sequence:
>792_residues MAGDLKAQIEISADSKGVESGVGKAKKSLASLGVTADATGKRAADGFDKIGTASASARRSIDATVARLQMQAATVNKSTV DAKLFELAQRGASRSQLVAAEAALRSVAASKAQAEALVKSEAAYNSARASATRYGAYLATLSVAAGAAVAAIIKRSINAQ DAFNDLKDATGASIENISALDRIARETGGGFESMSSTLVKFNQVLSKTDDDSAEAARILKALGLNAEELRKIDPAEALRQ TAVALAKVADDGSRARAIQVLFGKSVREAAPLLNDLAEKTELVATTTTAAALKAEDFNKKIFQIKANAEDAARILASSLI PTVSNLADEFLVGMKHADGLLDAIITFGTINPFKTQAGNLKSLREELAGLEGDRQRYVRAGSDTRAIDDAIRNARKQIDF LSELQQRQALQGVGDTSDALSRRLAPSAAPSLKIPDKPPRSTGSKADPQAEAKRYLESLQKQLEATQNLTISEQTLRDLQ MDRLGKVSPALREALLSTAQQVDLARDWTKALEDAAQAREEASRVQQRADEAAVASVAQMIEQNQALKDEIALIGASIGQ RVAIEKARISSAIAIKEETLAQLQSVGASKVVIESLQKEIALLRERQGLIDDRGAAEKVAAEAEKAGDAAKELGLTFSSA FEDAIVGGKGLRDILKGVEQDLLRLAVRKGITEPFADAAEGFFKNSGEGGWGSILSAVGSFFGGGRAIGGPVSAGKMYRV NERRPEVLDVGGQQFLMMGNQSGKVQSAGTKEQSVVVTNNFTLHQPASRETQQQIASRAGAAITAAMRRGTA
Sequences:
>Translated_792_residues MAGDLKAQIEISADSKGVESGVGKAKKSLASLGVTADATGKRAADGFDKIGTASASARRSIDATVARLQMQAATVNKSTV DAKLFELAQRGASRSQLVAAEAALRSVAASKAQAEALVKSEAAYNSARASATRYGAYLATLSVAAGAAVAAIIKRSINAQ DAFNDLKDATGASIENISALDRIARETGGGFESMSSTLVKFNQVLSKTDDDSAEAARILKALGLNAEELRKIDPAEALRQ TAVALAKVADDGSRARAIQVLFGKSVREAAPLLNDLAEKTELVATTTTAAALKAEDFNKKIFQIKANAEDAARILASSLI PTVSNLADEFLVGMKHADGLLDAIITFGTINPFKTQAGNLKSLREELAGLEGDRQRYVRAGSDTRAIDDAIRNARKQIDF LSELQQRQALQGVGDTSDALSRRLAPSAAPSLKIPDKPPRSTGSKADPQAEAKRYLESLQKQLEATQNLTISEQTLRDLQ MDRLGKVSPALREALLSTAQQVDLARDWTKALEDAAQAREEASRVQQRADEAAVASVAQMIEQNQALKDEIALIGASIGQ RVAIEKARISSAIAIKEETLAQLQSVGASKVVIESLQKEIALLRERQGLIDDRGAAEKVAAEAEKAGDAAKELGLTFSSA FEDAIVGGKGLRDILKGVEQDLLRLAVRKGITEPFADAAEGFFKNSGEGGWGSILSAVGSFFGGGRAIGGPVSAGKMYRV NERRPEVLDVGGQQFLMMGNQSGKVQSAGTKEQSVVVTNNFTLHQPASRETQQQIASRAGAAITAAMRRGTA >Mature_791_residues AGDLKAQIEISADSKGVESGVGKAKKSLASLGVTADATGKRAADGFDKIGTASASARRSIDATVARLQMQAATVNKSTVD AKLFELAQRGASRSQLVAAEAALRSVAASKAQAEALVKSEAAYNSARASATRYGAYLATLSVAAGAAVAAIIKRSINAQD AFNDLKDATGASIENISALDRIARETGGGFESMSSTLVKFNQVLSKTDDDSAEAARILKALGLNAEELRKIDPAEALRQT AVALAKVADDGSRARAIQVLFGKSVREAAPLLNDLAEKTELVATTTTAAALKAEDFNKKIFQIKANAEDAARILASSLIP TVSNLADEFLVGMKHADGLLDAIITFGTINPFKTQAGNLKSLREELAGLEGDRQRYVRAGSDTRAIDDAIRNARKQIDFL SELQQRQALQGVGDTSDALSRRLAPSAAPSLKIPDKPPRSTGSKADPQAEAKRYLESLQKQLEATQNLTISEQTLRDLQM DRLGKVSPALREALLSTAQQVDLARDWTKALEDAAQAREEASRVQQRADEAAVASVAQMIEQNQALKDEIALIGASIGQR VAIEKARISSAIAIKEETLAQLQSVGASKVVIESLQKEIALLRERQGLIDDRGAAEKVAAEAEKAGDAAKELGLTFSSAF EDAIVGGKGLRDILKGVEQDLLRLAVRKGITEPFADAAEGFFKNSGEGGWGSILSAVGSFFGGGRAIGGPVSAGKMYRVN ERRPEVLDVGGQQFLMMGNQSGKVQSAGTKEQSVVVTNNFTLHQPASRETQQQIASRAGAAITAAMRRGTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83493; Mature: 83362
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDLKAQIEISADSKGVESGVGKAKKSLASLGVTADATGKRAADGFDKIGTASASARRS CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCCHHHHHH IDATVARLQMQAATVNKSTVDAKLFELAQRGASRSQLVAAEAALRSVAASKAQAEALVKS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAYNSARASATRYGAYLATLSVAAGAAVAAIIKRSINAQDAFNDLKDATGASIENISAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH DRIARETGGGFESMSSTLVKFNQVLSKTDDDSAEAARILKALGLNAEELRKIDPAEALRQ HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHH TAVALAKVADDGSRARAIQVLFGKSVREAAPLLNDLAEKTELVATTTTAAALKAEDFNKK HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE IFQIKANAEDAARILASSLIPTVSNLADEFLVGMKHADGLLDAIITFGTINPFKTQAGNL EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCH KSLREELAGLEGDRQRYVRAGSDTRAIDDAIRNARKQIDFLSELQQRQALQGVGDTSDAL HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH SRRLAPSAAPSLKIPDKPPRSTGSKADPQAEAKRYLESLQKQLEATQNLTISEQTLRDLQ HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MDRLGKVSPALREALLSTAQQVDLARDWTKALEDAAQAREEASRVQQRADEAAVASVAQM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQNQALKDEIALIGASIGQRVAIEKARISSAIAIKEETLAQLQSVGASKVVIESLQKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALLRERQGLIDDRGAAEKVAAEAEKAGDAAKELGLTFSSAFEDAIVGGKGLRDILKGVEQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH DLLRLAVRKGITEPFADAAEGFFKNSGEGGWGSILSAVGSFFGGGRAIGGPVSAGKMYRV HHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE NERRPEVLDVGGQQFLMMGNQSGKVQSAGTKEQSVVVTNNFTLHQPASRETQQQIASRAG CCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHH AAITAAMRRGTA HHHHHHHHCCCC >Mature Secondary Structure AGDLKAQIEISADSKGVESGVGKAKKSLASLGVTADATGKRAADGFDKIGTASASARRS CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCCHHHHHH IDATVARLQMQAATVNKSTVDAKLFELAQRGASRSQLVAAEAALRSVAASKAQAEALVKS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAYNSARASATRYGAYLATLSVAAGAAVAAIIKRSINAQDAFNDLKDATGASIENISAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH DRIARETGGGFESMSSTLVKFNQVLSKTDDDSAEAARILKALGLNAEELRKIDPAEALRQ HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHH TAVALAKVADDGSRARAIQVLFGKSVREAAPLLNDLAEKTELVATTTTAAALKAEDFNKK HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE IFQIKANAEDAARILASSLIPTVSNLADEFLVGMKHADGLLDAIITFGTINPFKTQAGNL EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCH KSLREELAGLEGDRQRYVRAGSDTRAIDDAIRNARKQIDFLSELQQRQALQGVGDTSDAL HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH SRRLAPSAAPSLKIPDKPPRSTGSKADPQAEAKRYLESLQKQLEATQNLTISEQTLRDLQ HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MDRLGKVSPALREALLSTAQQVDLARDWTKALEDAAQAREEASRVQQRADEAAVASVAQM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQNQALKDEIALIGASIGQRVAIEKARISSAIAIKEETLAQLQSVGASKVVIESLQKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALLRERQGLIDDRGAAEKVAAEAEKAGDAAKELGLTFSSAFEDAIVGGKGLRDILKGVEQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH DLLRLAVRKGITEPFADAAEGFFKNSGEGGWGSILSAVGSFFGGGRAIGGPVSAGKMYRV HHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE NERRPEVLDVGGQQFLMMGNQSGKVQSAGTKEQSVVVTNNFTLHQPASRETQQQIASRAG CCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHH AAITAAMRRGTA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA