| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is engB [H]
Identifier: 124265624
GI number: 124265624
Start: 470198
End: 470899
Strand: Reverse
Name: engB [H]
Synonym: Mpe_A0431
Alternate gene names: 124265624
Gene position: 470899-470198 (Counterclockwise)
Preceding gene: 124265631
Following gene: 124265618
Centisome position: 11.64
GC content: 70.23
Gene sequence:
>702_bases ATGAACTCGCCCACTCCGGCGGTCCCGGACCCCGCCAAAGTGGCGCTGGCCTGGACCCACACCGCCCGCTTTCTCACCAC CGCCGCGCGGATGGAACACCTGCCGGTCAACGAGCTGCCGGAGATTGCCTTCGTGGGCCGCTCGAACGCCGGCAAGTCCA CCGCGATCAACCTGCTGACGCAGCAGAAGCGCCTGGCCTTCGCCTCGAAGACGCCCGGCCGCACCCAGCACATCAACCTG TTCTCGCTCGGCCCGAAGGATGCGCCCGACGCGCTGTTCGCCGACCTGCCCGGCTACGGCTACGCGGCCGTCGCGCGCGG AGCAAAGCTGCGCTGGCAGCAGGTGATGGCGGAGTATCTGGAAACGCGGCGCAGCCTGTCGGGCGTGGTGCTGATGGTCG ATTCCCGGCTGGGCTTCACCGAACTCGATCAACAGCTGCTGGCCTTCGTGGCGCCGCGCGTCGGCACCGGAGAGATCAAG CTGCTGGTGCTGCTGACCAAGGCCGACAAGCTCAACCGCCGCGAGGCCGATGCCGCGCTCGCTGCCGCGCAGGGGGTGCT TCGCCAGTTGGCGACCGACGACGCCGACCTGAGCCTCGCGCTGTTCTCGGCACTGAGCCGGCGCGGTGTCGGTGATGCCG CCCAGGTGCTGCACACCTGGGCGCACGGCGAGCCGGCGCCGGGATCGACGCCGGCTGGCTGA
Upstream 100 bases:
>100_bases GCCAACAGGAACGACAGGAGAGACTTCATGGGCGAGCAATGGAGGAGTGGGTGGCGAACGGGTCAGACCCGTCGGCTAAC CAGCGATTTTACAATGCCGC
Downstream 100 bases:
>100_bases ACCGGCCGCCGCCGCTCAGGGGCGGCCGAGCAGCAGGTAGACCGCGGTGTCGCCGCGCGGCGCGTAGGCCACGCCGACAT AGAGCGGGCCCAGCCCGGTA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNSPTPAVPDPAKVALAWTHTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLTQQKRLAFASKTPGRTQHINL FSLGPKDAPDALFADLPGYGYAAVARGAKLRWQQVMAEYLETRRSLSGVVLMVDSRLGFTELDQQLLAFVAPRVGTGEIK LLVLLTKADKLNRREADAALAAAQGVLRQLATDDADLSLALFSALSRRGVGDAAQVLHTWAHGEPAPGSTPAG
Sequences:
>Translated_233_residues MNSPTPAVPDPAKVALAWTHTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLTQQKRLAFASKTPGRTQHINL FSLGPKDAPDALFADLPGYGYAAVARGAKLRWQQVMAEYLETRRSLSGVVLMVDSRLGFTELDQQLLAFVAPRVGTGEIK LLVLLTKADKLNRREADAALAAAQGVLRQLATDDADLSLALFSALSRRGVGDAAQVLHTWAHGEPAPGSTPAG >Mature_233_residues MNSPTPAVPDPAKVALAWTHTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLTQQKRLAFASKTPGRTQHINL FSLGPKDAPDALFADLPGYGYAAVARGAKLRWQQVMAEYLETRRSLSGVVLMVDSRLGFTELDQQLLAFVAPRVGTGEIK LLVLLTKADKLNRREADAALAAAQGVLRQLATDDADLSLALFSALSRRGVGDAAQVLHTWAHGEPAPGSTPAG
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=178, Percent_Identity=32.0224719101124, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI145693205, Length=198, Percent_Identity=44.9494949494949, Blast_Score=152, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 24870; Mature: 24870
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPTPAVPDPAKVALAWTHTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLT CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHH QQKRLAFASKTPGRTQHINLFSLGPKDAPDALFADLPGYGYAAVARGAKLRWQQVMAEYL HHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHHHHH ETRRSLSGVVLMVDSRLGFTELDQQLLAFVAPRVGTGEIKLLVLLTKADKLNRREADAAL HHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHH AAAQGVLRQLATDDADLSLALFSALSRRGVGDAAQVLHTWAHGEPAPGSTPAG HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNSPTPAVPDPAKVALAWTHTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLT CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHH QQKRLAFASKTPGRTQHINLFSLGPKDAPDALFADLPGYGYAAVARGAKLRWQQVMAEYL HHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHHHHH ETRRSLSGVVLMVDSRLGFTELDQQLLAFVAPRVGTGEIKLLVLLTKADKLNRREADAAL HHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHH AAAQGVLRQLATDDADLSLALFSALSRRGVGDAAQVLHTWAHGEPAPGSTPAG HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA