| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265599
Identifier: 124265599
GI number: 124265599
Start: 441861
End: 442238
Strand: Reverse
Name: 124265599
Synonym: Mpe_A0406
Alternate gene names: NA
Gene position: 442238-441861 (Counterclockwise)
Preceding gene: 124265600
Following gene: 124265589
Centisome position: 10.94
GC content: 69.31
Gene sequence:
>378_bases ATGGCCGACCGCACCGACAACCGCCCTCCCGCCCCGTACCGAGAGCTGACGCTGGATATTTCCGCTCGGCTCGCCACCCT GCGCACGGGCGTCCCCGACGTGATGAAGGGTTTCGGCGAGCTGGGCCGCGCAGCGATGGCCGATGGCGCGCTGGACAAGA AGACCAAGGAGCTGATCGCGGTGGCACTGAGCGTGGCCGCGCGCTGCGACCCGTGCATCGGGTTTCACATGCAGGCGTTG GCGAAGCTCGGCGCGTCGCGGCAGGAGCTGGATGAAGCGCTGGGCGTCGCCGTCTACATGGGCGGCGGACCGTCGCTGAT GTATGCGGCCCATGCGGTGGCCGCCTACGACGAGTTCGCGCGTGGCCCCGACATCTAG
Upstream 100 bases:
>100_bases ATCGCCACCGGTCTGTTCCGCTTCTGCCCCGCCTACCTGCCGTTCGGGCTGAACACCTGCGCCACGCGCAGCGGCAAGTG AGCGACAGGCACGCACTGCC
Downstream 100 bases:
>100_bases CGCACCGCCGTCACACGCGAGATGAGACGGCGATGCGCCGGCCGGCGCTACACGGTCGCGGCCGGGTAGCTGCCCTCGCC GTGGGGCGCGGCACGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF 7 [H]
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MADRTDNRPPAPYRELTLDISARLATLRTGVPDVMKGFGELGRAAMADGALDKKTKELIAVALSVAARCDPCIGFHMQAL AKLGASRQELDEALGVAVYMGGGPSLMYAAHAVAAYDEFARGPDI
Sequences:
>Translated_125_residues MADRTDNRPPAPYRELTLDISARLATLRTGVPDVMKGFGELGRAAMADGALDKKTKELIAVALSVAARCDPCIGFHMQAL AKLGASRQELDEALGVAVYMGGGPSLMYAAHAVAAYDEFARGPDI >Mature_124_residues ADRTDNRPPAPYRELTLDISARLATLRTGVPDVMKGFGELGRAAMADGALDKKTKELIAVALSVAARCDPCIGFHMQALA KLGASRQELDEALGVAVYMGGGPSLMYAAHAVAAYDEFARGPDI
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1053 and P.denitrificans COX locus Uncharacterized protein 4 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 13193; Mature: 13062
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRTDNRPPAPYRELTLDISARLATLRTGVPDVMKGFGELGRAAMADGALDKKTKELIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VALSVAARCDPCIGFHMQALAKLGASRQELDEALGVAVYMGGGPSLMYAAHAVAAYDEFA HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHH RGPDI CCCCC >Mature Secondary Structure ADRTDNRPPAPYRELTLDISARLATLRTGVPDVMKGFGELGRAAMADGALDKKTKELIA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VALSVAARCDPCIGFHMQALAKLGASRQELDEALGVAVYMGGGPSLMYAAHAVAAYDEFA HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHH RGPDI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2061286 [H]