| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265583
Identifier: 124265583
GI number: 124265583
Start: 422966
End: 423442
Strand: Reverse
Name: 124265583
Synonym: Mpe_A0390
Alternate gene names: NA
Gene position: 423442-422966 (Counterclockwise)
Preceding gene: 124265589
Following gene: 124265578
Centisome position: 10.47
GC content: 70.44
Gene sequence:
>477_bases ATGGGCCACGCTGCGCGAGGGATCGTCGTGCCAGTAGAGCCGCAGGCAGCCCGCCTGCGGGCCCACCGTCTCCAGCACCA CGAAGTCACCGGCATCGTTGGTGAGAACCGGCAGCCACGACGCGCTCCACGGCGCCATGACATCGGAGCGGGGATCGGAA AAGTAGGCCAGTTCGCTCCGGATCTCGCCAGCCGACAGCAGGCGGCGATTGTTCTTCGTGCTGAGAGGCGCGTTCCAGGA CTGGCCGTCGTGCCAGGCGAGCAGTGCCTGAAGGTCGGCCGGAAGCCTGGCGCCCTCTGGCAGCAGGGCGGCCAGCGCGG CCAGGTCTTCTGCGCGCGCCGGCGGCCGCAGGGTGGCGCACACCTGCGGCGGGAGAGCGGTGTCGAGCCGGGCGAGCACG GCCGCAAATGCCGCGGTGTCTTCGGTGCTGGGGGCAGGCATGGCGATGGACTCCAGCCGACGACGGCTAGAAGGTGA
Upstream 100 bases:
>100_bases GGCCGCCATCCCCAACTCGTCGCGAATGCCGGGCCGCTCAGCCTGCGGGCGGCGGCAGGTACTCGCCGAGCAGGGCTTCC GCCCACTTCAGCAGTGAGGG
Downstream 100 bases:
>100_bases CCGGGTGGTACTTCCGGTTGGCGCCTTCCAGGCCCAGGGAGAGGCCATGGTCGGGCCGCTCGCCCAGGTCTTGCAGCTGC ACGGCCACGCGGTCGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MGHAARGIVVPVEPQAARLRAHRLQHHEVTGIVGENRQPRRAPRRHDIGAGIGKVGQFAPDLASRQQAAIVLRAERRVPG LAVVPGEQCLKVGRKPGALWQQGGQRGQVFCARRRPQGGAHLRRESGVEPGEHGRKCRGVFGAGGRHGDGLQPTTARR
Sequences:
>Translated_158_residues MGHAARGIVVPVEPQAARLRAHRLQHHEVTGIVGENRQPRRAPRRHDIGAGIGKVGQFAPDLASRQQAAIVLRAERRVPG LAVVPGEQCLKVGRKPGALWQQGGQRGQVFCARRRPQGGAHLRRESGVEPGEHGRKCRGVFGAGGRHGDGLQPTTARR >Mature_157_residues GHAARGIVVPVEPQAARLRAHRLQHHEVTGIVGENRQPRRAPRRHDIGAGIGKVGQFAPDLASRQQAAIVLRAERRVPGL AVVPGEQCLKVGRKPGALWQQGGQRGQVFCARRRPQGGAHLRRESGVEPGEHGRKCRGVFGAGGRHGDGLQPTTARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17040; Mature: 16909
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHAARGIVVPVEPQAARLRAHRLQHHEVTGIVGENRQPRRAPRRHDIGAGIGKVGQFAP CCCCCCCCEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC DLASRQQAAIVLRAERRVPGLAVVPGEQCLKVGRKPGALWQQGGQRGQVFCARRRPQGGA CHHCCCCEEEEEEECCCCCCEEECCHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCCC HLRRESGVEPGEHGRKCRGVFGAGGRHGDGLQPTTARR CCHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GHAARGIVVPVEPQAARLRAHRLQHHEVTGIVGENRQPRRAPRRHDIGAGIGKVGQFAP CCCCCCCEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC DLASRQQAAIVLRAERRVPGLAVVPGEQCLKVGRKPGALWQQGGQRGQVFCARRRPQGGA CHHCCCCEEEEEEECCCCCCEEECCHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCCC HLRRESGVEPGEHGRKCRGVFGAGGRHGDGLQPTTARR CCHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA