| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265548
Identifier: 124265548
GI number: 124265548
Start: 390701
End: 391447
Strand: Reverse
Name: 124265548
Synonym: Mpe_A0355
Alternate gene names: NA
Gene position: 391447-390701 (Counterclockwise)
Preceding gene: 124265550
Following gene: 124265544
Centisome position: 9.68
GC content: 72.16
Gene sequence:
>747_bases ATGAAGCGATCGACACGCTGGCTGCTCGCGCTGTGCGGCCTCGGTCTCGGGGTGCTGGGCGCGCATGCGCAGACCACGCG GCCTGCCGTGCAGGCGCGCGCGAACGGCAGCGGCGGGCCCGCGGCCGCCGCGACGCCCGTCGAGGCGCGCTGGCAGGAAA GCCTGGACGCCTTCGCGCTGGCCGACGAGGCCCAGGCGCCGCAGCCCGGCGGGGTGCTGTTCGTCGGCAGCTCGTCGATC CGGCTGTGGTCGGGGCTGGAGGCGCAGTTCGCCGGCGAGACGATCGTCAAGCGCGGCTTCGGCGGCTCGCGGATGTTCGA CTGCGCGGCGTACCTGGAACGGCTGGTGCTGCCGTACAAGCCGCGGCTGGTGATCGTCTACGCCGGCGACAACGACCTCG CCGAGGGCCGCACGCCGCAGCAGGTGCTGGCGAGCTTCAGCACCTTCGTGGAGGGTGTGCGCCGGGCGCTGCCCGACACG CGCATCGCCTTCCTGTCGATCAAGCCCAGCCCGCTGCGCAGCGCGCTGATGCCGCAGGTGGTCGAGACCAATGCGCTGGT GGCCGACTACAGCCGCCACACGCCGAACCTCGACTACATCGACATCTACTCGAAGATGCTCGATGCGCAGGGGCAGCCGC GCGCGGAGCTGTTCCTGCCCGATGCGCTGCACCTGAACACGCAGGGCTACGCGCTGTGGCGCACCGTCATCGCCGACCAC CTGCGCGCGCCCGCACCGCCACGCTGA
Upstream 100 bases:
>100_bases ATGGGCCGTGGCGCGGAACCGCGAGGCCCGCAGCCGACCTCAAGGGGTCGTTCCCGGAGTTCGCCCCGCCGCGCCCGCGG CGGGCAAGGAGTGACAGACG
Downstream 100 bases:
>100_bases GCGCCGCGTCGGCGGCCTGCGAGCGCAGCTGCCGGCGCATCGCGGCGGTGCGGCGGTCGAGTTCGCCGCTGGTCCACGCC ACCGCGTAGAGGACGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family; Esterase/Lipase-Like Protein; Acyl-CoA Thioesterase; Lipase/Acylhydrolase; Lysophospholipase; Lipolytic; Signal Peptide; GDSL-Like Lipase/Acylhydrolase Domain Protein; Secreted Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKRSTRWLLALCGLGLGVLGAHAQTTRPAVQARANGSGGPAAAATPVEARWQESLDAFALADEAQAPQPGGVLFVGSSSI RLWSGLEAQFAGETIVKRGFGGSRMFDCAAYLERLVLPYKPRLVIVYAGDNDLAEGRTPQQVLASFSTFVEGVRRALPDT RIAFLSIKPSPLRSALMPQVVETNALVADYSRHTPNLDYIDIYSKMLDAQGQPRAELFLPDALHLNTQGYALWRTVIADH LRAPAPPR
Sequences:
>Translated_248_residues MKRSTRWLLALCGLGLGVLGAHAQTTRPAVQARANGSGGPAAAATPVEARWQESLDAFALADEAQAPQPGGVLFVGSSSI RLWSGLEAQFAGETIVKRGFGGSRMFDCAAYLERLVLPYKPRLVIVYAGDNDLAEGRTPQQVLASFSTFVEGVRRALPDT RIAFLSIKPSPLRSALMPQVVETNALVADYSRHTPNLDYIDIYSKMLDAQGQPRAELFLPDALHLNTQGYALWRTVIADH LRAPAPPR >Mature_248_residues MKRSTRWLLALCGLGLGVLGAHAQTTRPAVQARANGSGGPAAAATPVEARWQESLDAFALADEAQAPQPGGVLFVGSSSI RLWSGLEAQFAGETIVKRGFGGSRMFDCAAYLERLVLPYKPRLVIVYAGDNDLAEGRTPQQVLASFSTFVEGVRRALPDT RIAFLSIKPSPLRSALMPQVVETNALVADYSRHTPNLDYIDIYSKMLDAQGQPRAELFLPDALHLNTQGYALWRTVIADH LRAPAPPR
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26837; Mature: 26837
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSTRWLLALCGLGLGVLGAHAQTTRPAVQARANGSGGPAAAATPVEARWQESLDAFAL CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ADEAQAPQPGGVLFVGSSSIRLWSGLEAQFAGETIVKRGFGGSRMFDCAAYLERLVLPYK HCCCCCCCCCCEEEECCCCEEEECCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC PRLVIVYAGDNDLAEGRTPQQVLASFSTFVEGVRRALPDTRIAFLSIKPSPLRSALMPQV CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH VETNALVADYSRHTPNLDYIDIYSKMLDAQGQPRAELFLPDALHLNTQGYALWRTVIADH HHCCHHEEHHHCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHH LRAPAPPR HCCCCCCC >Mature Secondary Structure MKRSTRWLLALCGLGLGVLGAHAQTTRPAVQARANGSGGPAAAATPVEARWQESLDAFAL CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ADEAQAPQPGGVLFVGSSSIRLWSGLEAQFAGETIVKRGFGGSRMFDCAAYLERLVLPYK HCCCCCCCCCCEEEECCCCEEEECCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC PRLVIVYAGDNDLAEGRTPQQVLASFSTFVEGVRRALPDTRIAFLSIKPSPLRSALMPQV CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH VETNALVADYSRHTPNLDYIDIYSKMLDAQGQPRAELFLPDALHLNTQGYALWRTVIADH HHCCHHEEHHHCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHH LRAPAPPR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA