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The map label for this gene is bkdR [H]

Identifier: 124265538

GI number: 124265538

Start: 380268

End: 380750

Strand: Reverse

Name: bkdR [H]

Synonym: Mpe_A0345

Alternate gene names: 124265538

Gene position: 380750-380268 (Counterclockwise)

Preceding gene: 124265542

Following gene: 124265533

Centisome position: 9.41

GC content: 67.29

Gene sequence:

>483_bases
ATGGAAGCCTCTATCGAGCTCGACATGATCGACCGACGCATCCTGCGCGTGCTGCAGGCCAACGGCCGCGCCACCTACGA
CCAGCTGGCCGCCGAGGTACAGCTGTCGGCCTCGGCCGCACTGCGGCGCGTGAAGCGGCTGGAGGAAGCGGGCGTGATCG
CGGGCTATGCAGCGGTGGTGCCACCTGCGGGCGTGGGCCTGGGGCTCACGGCCTTCATCAGCGTGCGGCTCGAGAAGCAC
ACCGAGACGCACAAGCGCAACCCGATGGATCTGTTCAAGGCCTCGGTGCAGGTGTGGCCCGAGGTGGTGGAGTGCGTGGC
GCTGACCGGCGAGACCGACTACCACCTGCGCGTGGTGGTGCAGGACATGGCGCACTACTCGCGCTTCATCATGGACACGC
TGCTGAAGCACCCGAGCGTCGAGGACTGCAAGACGAGCTTCGTGATGGACCGCGTGAAGGCGACCAGCGCCACGCCGGTG
TGA

Upstream 100 bases:

>100_bases
AGAAAGAACTGTCTCCACTGTATAGAGCATGCGGCGCAGGTTTACTGCAAACCACGCGCAATTGACCCACATCGCGCATG
ATTCCTGCACAATCAACCTT

Downstream 100 bases:

>100_bases
GACGCCGGCCTCAGGCCGTCTTCACGTCGACCAGGCCCAGCAGCTCCTTCATCTGCTCGCGCATCCTGAACTTCTGGATC
TTGCCGGTCACCGTCATCGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MEASIELDMIDRRILRVLQANGRATYDQLAAEVQLSASAALRRVKRLEEAGVIAGYAAVVPPAGVGLGLTAFISVRLEKH
TETHKRNPMDLFKASVQVWPEVVECVALTGETDYHLRVVVQDMAHYSRFIMDTLLKHPSVEDCKTSFVMDRVKATSATPV

Sequences:

>Translated_160_residues
MEASIELDMIDRRILRVLQANGRATYDQLAAEVQLSASAALRRVKRLEEAGVIAGYAAVVPPAGVGLGLTAFISVRLEKH
TETHKRNPMDLFKASVQVWPEVVECVALTGETDYHLRVVVQDMAHYSRFIMDTLLKHPSVEDCKTSFVMDRVKATSATPV
>Mature_160_residues
MEASIELDMIDRRILRVLQANGRATYDQLAAEVQLSASAALRRVKRLEEAGVIAGYAAVVPPAGVGLGLTAFISVRLEKH
TETHKRNPMDLFKASVQVWPEVVECVALTGETDYHLRVVVQDMAHYSRFIMDTLLKHPSVEDCKTSFVMDRVKATSATPV

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=151, Percent_Identity=36.4238410596026, Blast_Score=101, Evalue=2e-23,
Organism=Escherichia coli, GI87081742, Length=155, Percent_Identity=35.4838709677419, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17708; Mature: 17708

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASIELDMIDRRILRVLQANGRATYDQLAAEVQLSASAALRRVKRLEEAGVIAGYAAVV
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
PPAGVGLGLTAFISVRLEKHTETHKRNPMDLFKASVQVWPEVVECVALTGETDYHLRVVV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QDMAHYSRFIMDTLLKHPSVEDCKTSFVMDRVKATSATPV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEASIELDMIDRRILRVLQANGRATYDQLAAEVQLSASAALRRVKRLEEAGVIAGYAAVV
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
PPAGVGLGLTAFISVRLEKHTETHKRNPMDLFKASVQVWPEVVECVALTGETDYHLRVVV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QDMAHYSRFIMDTLLKHPSVEDCKTSFVMDRVKATSATPV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]