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The map label for this gene is yfdE [H]

Identifier: 124265514

GI number: 124265514

Start: 346456

End: 347721

Strand: Reverse

Name: yfdE [H]

Synonym: Mpe_A0321

Alternate gene names: 124265514

Gene position: 347721-346456 (Counterclockwise)

Preceding gene: 124265518

Following gene: 124265513

Centisome position: 8.6

GC content: 72.12

Gene sequence:

>1266_bases
ATGGCCCTCGCTCCCACCCCTCTCTCACTGGCCGGCCTGCGCGTGCTGGACCTGTCGCGCGTGCTGGCCGGGCCCTGGTG
CACGCAGCTGCTCGGCGACCTGGGCGCCGACGTGGTGAAGGTCGAGCGGCCCGGTAGCGGCGACGACACGCGCGGTTGGG
GCCCGCCCTTCCTGCACGACCGACACGGCGCCGAAAGCAGCGAATCGGCCTATTTCCTGGGCGCGAACCGCAACAAGCGC
TCGATCGCGATAGACCTCGCACACCCTGACGGCCAGGCGCTGGTGCGCGCCCTGGTACTGCAGGCCGATGTGCTGGTCGA
GAACTACAAGGTCGGCGACATGGCGCGCTACGGCCTCGACTTCGTGACGCTGCACGCCCTGAACCCGCAGCTGGTCTACT
GCTCGATCACCGGCTACGGCCAGACCGGCCCCTATCACGAGCGTGCCGGCTACGACTACGCGGTGCAAGGGCTGGGCGGC
CTGATGAGCCTGACCGGCGAACGGGACGACCTGCCCGGCGGTGGCCCGCAAAAGGTGGGCGTGGCGGTCGCCGACCTGTT
CACCGGCCTGTATGCCAGCGTCGGCATCCTCGCGGCCCTGCGGCACCGCGACGCCGAGGGCTTCCGTCGCGGCGAGGGCC
AGCACATCGATATGGCGCTGCTCGACACGCAGGTGGCGATGCTGGCCAACCTGGGCGCCAACTACCTCGTGAGCGGCCAG
GTACCAGGACGCGCCGGCAACGCGCACCAGAACATCGTGCCCTATCAGGTGTTCGAGGTCGCCGATGGCCACGTGATCCT
GGCGATCGGCAACGATGCGCAGTTCGCCCGCTTCTGCGAGGTCGCCGGGCGGCCCGAGCTGGCCGCCGATCCGCGCTTCG
CGACCAACGCCGACCGGGTGCGCCATCGCGCCGCGCTGGTGCCGGTGCTCGCCGCGCTGATGCGACAGCGTCGGCGCGAC
GACTGGCTGGCGGCCCTGGAGGCGGCGAAGCTGCCCTGCGGACCGATCAACGCGCTCGACCAGGTGTTCGCCGACCCCCA
GGTGCTGGCACGCGGCATGGTCGAGCCGGTCGACCACCCGCTGACCGACACGCTGCGACTGGTCGCCAGCCCACTCAAGC
TGTCGGCCACGCCGGCGCAGACGCGCCGGCCGCCGCCCCTGCTCGACCAGCACGGCGACGACGTGCTGGTCGACTGGCTG
GGCTGGGACGCGGCCGCCATCGCCGCGGCGCGCGAGCGCGGCGCGCTTGGCCCGCCACGCCCCTGA

Upstream 100 bases:

>100_bases
CCGCCAGAGCGGAGAGACCCGCCACCCAGGCACACACGACGGGTCGCAACGACATCGCCGCATTATCCGGATGCCGCGCG
CACCGCATCAGAATCGCGGC

Downstream 100 bases:

>100_bases
GTCAGGGGGGCAGCACGCATGAACGTCACAAAGTGCTGGGCTGCGTGAAGAAACGCTCGGACAATCGACAGCAGGAAGTG
TCGGGCTTCCCGGCCGCGTG

Product: CaiB/BaiF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MALAPTPLSLAGLRVLDLSRVLAGPWCTQLLGDLGADVVKVERPGSGDDTRGWGPPFLHDRHGAESSESAYFLGANRNKR
SIAIDLAHPDGQALVRALVLQADVLVENYKVGDMARYGLDFVTLHALNPQLVYCSITGYGQTGPYHERAGYDYAVQGLGG
LMSLTGERDDLPGGGPQKVGVAVADLFTGLYASVGILAALRHRDAEGFRRGEGQHIDMALLDTQVAMLANLGANYLVSGQ
VPGRAGNAHQNIVPYQVFEVADGHVILAIGNDAQFARFCEVAGRPELAADPRFATNADRVRHRAALVPVLAALMRQRRRD
DWLAALEAAKLPCGPINALDQVFADPQVLARGMVEPVDHPLTDTLRLVASPLKLSATPAQTRRPPPLLDQHGDDVLVDWL
GWDAAAIAAARERGALGPPRP

Sequences:

>Translated_421_residues
MALAPTPLSLAGLRVLDLSRVLAGPWCTQLLGDLGADVVKVERPGSGDDTRGWGPPFLHDRHGAESSESAYFLGANRNKR
SIAIDLAHPDGQALVRALVLQADVLVENYKVGDMARYGLDFVTLHALNPQLVYCSITGYGQTGPYHERAGYDYAVQGLGG
LMSLTGERDDLPGGGPQKVGVAVADLFTGLYASVGILAALRHRDAEGFRRGEGQHIDMALLDTQVAMLANLGANYLVSGQ
VPGRAGNAHQNIVPYQVFEVADGHVILAIGNDAQFARFCEVAGRPELAADPRFATNADRVRHRAALVPVLAALMRQRRRD
DWLAALEAAKLPCGPINALDQVFADPQVLARGMVEPVDHPLTDTLRLVASPLKLSATPAQTRRPPPLLDQHGDDVLVDWL
GWDAAAIAAARERGALGPPRP
>Mature_420_residues
ALAPTPLSLAGLRVLDLSRVLAGPWCTQLLGDLGADVVKVERPGSGDDTRGWGPPFLHDRHGAESSESAYFLGANRNKRS
IAIDLAHPDGQALVRALVLQADVLVENYKVGDMARYGLDFVTLHALNPQLVYCSITGYGQTGPYHERAGYDYAVQGLGGL
MSLTGERDDLPGGGPQKVGVAVADLFTGLYASVGILAALRHRDAEGFRRGEGQHIDMALLDTQVAMLANLGANYLVSGQV
PGRAGNAHQNIVPYQVFEVADGHVILAIGNDAQFARFCEVAGRPELAADPRFATNADRVRHRAALVPVLAALMRQRRRDD
WLAALEAAKLPCGPINALDQVFADPQVLARGMVEPVDHPLTDTLRLVASPLKLSATPAQTRRPPPLLDQHGDDVLVDWLG
WDAAAIAAARERGALGPPRP

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=398, Percent_Identity=42.964824120603, Blast_Score=344, Evalue=8e-95,
Organism=Homo sapiens, GI300863124, Length=424, Percent_Identity=40.3301886792453, Blast_Score=330, Evalue=2e-90,
Organism=Homo sapiens, GI13376042, Length=424, Percent_Identity=37.7358490566038, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI300863126, Length=398, Percent_Identity=37.4371859296482, Blast_Score=287, Evalue=1e-77,
Organism=Homo sapiens, GI266456254, Length=399, Percent_Identity=25.8145363408521, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI42794625, Length=399, Percent_Identity=25.8145363408521, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI266458393, Length=270, Percent_Identity=30.7407407407407, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI266458397, Length=270, Percent_Identity=30.7407407407407, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI266458395, Length=153, Percent_Identity=34.640522875817, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI42822893, Length=153, Percent_Identity=34.640522875817, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI87082093, Length=387, Percent_Identity=33.3333333333333, Blast_Score=231, Evalue=5e-62,
Organism=Escherichia coli, GI1788717, Length=432, Percent_Identity=30.3240740740741, Blast_Score=168, Evalue=7e-43,
Organism=Escherichia coli, GI1786222, Length=404, Percent_Identity=23.019801980198, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI115535051, Length=336, Percent_Identity=24.4047619047619, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32564160, Length=356, Percent_Identity=23.876404494382, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24648431, Length=403, Percent_Identity=46.1538461538462, Blast_Score=358, Evalue=4e-99,
Organism=Drosophila melanogaster, GI24585488, Length=404, Percent_Identity=26.2376237623762, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 45006; Mature: 44875

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAPTPLSLAGLRVLDLSRVLAGPWCTQLLGDLGADVVKVERPGSGDDTRGWGPPFLHD
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
RHGAESSESAYFLGANRNKRSIAIDLAHPDGQALVRALVLQADVLVENYKVGDMARYGLD
CCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
FVTLHALNPQLVYCSITGYGQTGPYHERAGYDYAVQGLGGLMSLTGERDDLPGGGPQKVG
EEEEEECCCEEEEEEEECCCCCCCCHHHCCCCHHHHHCCHHHHCCCCCCCCCCCCCHHHH
VAVADLFTGLYASVGILAALRHRDAEGFRRGEGQHIDMALLDTQVAMLANLGANYLVSGQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEECC
VPGRAGNAHQNIVPYQVFEVADGHVILAIGNDAQFARFCEVAGRPELAADPRFATNADRV
CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RHRAALVPVLAALMRQRRRDDWLAALEAAKLPCGPINALDQVFADPQVLARGMVEPVDHP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCC
LTDTLRLVASPLKLSATPAQTRRPPPLLDQHGDDVLVDWLGWDAAAIAAARERGALGPPR
HHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCC
P
C
>Mature Secondary Structure 
ALAPTPLSLAGLRVLDLSRVLAGPWCTQLLGDLGADVVKVERPGSGDDTRGWGPPFLHD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
RHGAESSESAYFLGANRNKRSIAIDLAHPDGQALVRALVLQADVLVENYKVGDMARYGLD
CCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
FVTLHALNPQLVYCSITGYGQTGPYHERAGYDYAVQGLGGLMSLTGERDDLPGGGPQKVG
EEEEEECCCEEEEEEEECCCCCCCCHHHCCCCHHHHHCCHHHHCCCCCCCCCCCCCHHHH
VAVADLFTGLYASVGILAALRHRDAEGFRRGEGQHIDMALLDTQVAMLANLGANYLVSGQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEEEECC
VPGRAGNAHQNIVPYQVFEVADGHVILAIGNDAQFARFCEVAGRPELAADPRFATNADRV
CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RHRAALVPVLAALMRQRRRDDWLAALEAAKLPCGPINALDQVFADPQVLARGMVEPVDHP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCC
LTDTLRLVASPLKLSATPAQTRRPPPLLDQHGDDVLVDWLGWDAAAIAAARERGALGPPR
HHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]