| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265297
Identifier: 124265297
GI number: 124265297
Start: 106669
End: 107877
Strand: Reverse
Name: 124265297
Synonym: Mpe_A0104
Alternate gene names: NA
Gene position: 107877-106669 (Counterclockwise)
Preceding gene: 124265298
Following gene: 124265296
Centisome position: 2.67
GC content: 79.74
Gene sequence:
>1209_bases ATGAACCGTCCGCACCCGCCCGAGCCGGCCGGTGACGACGACGTGGCGCGCGACGCCCATCTGCGCGCCGCGCTGCGGCA TGCGCCGGACCGCGACGCCCGCCCGCCGGCCGAGCTGAGCCGGCGCATCCTCGACGCCGCCCGGGTCGCCTCAGGGTCCG CGCCGAAAAAGGCAGCGCGACCGGCCGCGGCGCCCTGGGCCCGCGTGCGCGACGGGTTCGCCTCGTGCACCGCGTGGCTG CGCCATCCGGGCGCGACGGCCGCGTTCGCGAGCCTGATGCTCGCCACCGTGATCGGAGTGATGTGGCGCGACGGCCCGCC GCCGGAGACCGAACCGGTCCATGACGGCGCTGCCCCGGCGGGGCCGTCGACCGCACCGTCCGCCTCAACCACCGCCGCAG ACCCCGCAGCGGACCGGCCGCCGGCACACCGCGACGTACCGGCCGAGACGGCCGCAGACGCAGCCGCGCGCGACACGGCC GCCATCACCGCGCGGCGCGCCGACAACGACGATGGCGGACGGCGCGAGGCCGCCGCCCCGCGGCCTCGAACGACCGGCCC CGCGCCATCGGGTCCGCCCGCCGGGAAGGCAGCGGCCCAGGAGAAGAGGATCGCAGCGCCCGAGGCGGCGAATCCGCCGG CTGCTGCTTCGCCGCCGCCGACCCCGATGGCGGCCTCCCCCGCTGCACCGGCCGTCACGCCGTCGGAGCGCTCCGGCGCC GCGGCGCAGAACCAGACCCCGCTCGGCGCCACCGCCGAGCGCAGCGGACGGGACGACAGGCCATCGGCCCAGGCCGCACC GCCCGACGATCCGCTGGCCGCGCCGATCGCAGCCCTGCGCGGCAGCGGTGGCGACGCGCCCGCCCGGCTGGCGCGACGCG ACGCGGCCACCGCGGTGGCGCCGTCGTCCGCGGCCGGGATGCCACCGAGCGCGCTGGCGTGGTTCGGCGACGCGCAGGCG CTGACGCGTGGCCGGTGGCGGCCGGTGGCGGCCACCTCGTCGGCGGCGCTGCCGACGGCCTGGACCGAGGTGCTGTCGAC CGACGGCCGCCCGCTGGGCCGCGTGGCGATCCTGGAGGGCGCGCTGTGGTGGCAGCCGGCCGGCACGGACGGCCGCATCT GGCGGGCGCCGCTGCCGGCCGGTGATGCCGCGCAGCGCCTCGCCGCGACGCTGGCCTCGGGCGCACTGGATCGGTCGCCG CCACCCTGA
Upstream 100 bases:
>100_bases CCGCCAAGAGCCGGCTGCGCTATGCGATGAGCAAGCTGCGCACCTGCATGGGCGCCTACCTGCCCGGTGCGGGCGTGCTG ACCGCGCCCGAGGGGAGCGC
Downstream 100 bases:
>100_bases GTGCCTGCGCGCGAACGGTCGGCCCCGCATAATGCCGGGTTGCCCTGCATGCCTGCGGGGCTAGGGCCTGTTAACGCTAC CGGAGGGCTCGCGTGACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MNRPHPPEPAGDDDVARDAHLRAALRHAPDRDARPPAELSRRILDAARVASGSAPKKAARPAAAPWARVRDGFASCTAWL RHPGATAAFASLMLATVIGVMWRDGPPPETEPVHDGAAPAGPSTAPSASTTAADPAADRPPAHRDVPAETAADAAARDTA AITARRADNDDGGRREAAAPRPRTTGPAPSGPPAGKAAAQEKRIAAPEAANPPAAASPPPTPMAASPAAPAVTPSERSGA AAQNQTPLGATAERSGRDDRPSAQAAPPDDPLAAPIAALRGSGGDAPARLARRDAATAVAPSSAAGMPPSALAWFGDAQA LTRGRWRPVAATSSAALPTAWTEVLSTDGRPLGRVAILEGALWWQPAGTDGRIWRAPLPAGDAAQRLAATLASGALDRSP PP
Sequences:
>Translated_402_residues MNRPHPPEPAGDDDVARDAHLRAALRHAPDRDARPPAELSRRILDAARVASGSAPKKAARPAAAPWARVRDGFASCTAWL RHPGATAAFASLMLATVIGVMWRDGPPPETEPVHDGAAPAGPSTAPSASTTAADPAADRPPAHRDVPAETAADAAARDTA AITARRADNDDGGRREAAAPRPRTTGPAPSGPPAGKAAAQEKRIAAPEAANPPAAASPPPTPMAASPAAPAVTPSERSGA AAQNQTPLGATAERSGRDDRPSAQAAPPDDPLAAPIAALRGSGGDAPARLARRDAATAVAPSSAAGMPPSALAWFGDAQA LTRGRWRPVAATSSAALPTAWTEVLSTDGRPLGRVAILEGALWWQPAGTDGRIWRAPLPAGDAAQRLAATLASGALDRSP PP >Mature_402_residues MNRPHPPEPAGDDDVARDAHLRAALRHAPDRDARPPAELSRRILDAARVASGSAPKKAARPAAAPWARVRDGFASCTAWL RHPGATAAFASLMLATVIGVMWRDGPPPETEPVHDGAAPAGPSTAPSASTTAADPAADRPPAHRDVPAETAADAAARDTA AITARRADNDDGGRREAAAPRPRTTGPAPSGPPAGKAAAQEKRIAAPEAANPPAAASPPPTPMAASPAAPAVTPSERSGA AAQNQTPLGATAERSGRDDRPSAQAAPPDDPLAAPIAALRGSGGDAPARLARRDAATAVAPSSAAGMPPSALAWFGDAQA LTRGRWRPVAATSSAALPTAWTEVLSTDGRPLGRVAILEGALWWQPAGTDGRIWRAPLPAGDAAQRLAATLASGALDRSP PP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40586; Mature: 40586
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPHPPEPAGDDDVARDAHLRAALRHAPDRDARPPAELSRRILDAARVASGSAPKKAAR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCC PAAAPWARVRDGFASCTAWLRHPGATAAFASLMLATVIGVMWRDGPPPETEPVHDGAAPA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GPSTAPSASTTAADPAADRPPAHRDVPAETAADAAARDTAAITARRADNDDGGRREAAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC RPRTTGPAPSGPPAGKAAAQEKRIAAPEAANPPAAASPPPTPMAASPAAPAVTPSERSGA CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAQNQTPLGATAERSGRDDRPSAQAAPPDDPLAAPIAALRGSGGDAPARLARRDAATAVA CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC PSSAAGMPPSALAWFGDAQALTRGRWRPVAATSSAALPTAWTEVLSTDGRPLGRVAILEG CCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC ALWWQPAGTDGRIWRAPLPAGDAAQRLAATLASGALDRSPPP CCEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNRPHPPEPAGDDDVARDAHLRAALRHAPDRDARPPAELSRRILDAARVASGSAPKKAAR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCC PAAAPWARVRDGFASCTAWLRHPGATAAFASLMLATVIGVMWRDGPPPETEPVHDGAAPA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GPSTAPSASTTAADPAADRPPAHRDVPAETAADAAARDTAAITARRADNDDGGRREAAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC RPRTTGPAPSGPPAGKAAAQEKRIAAPEAANPPAAASPPPTPMAASPAAPAVTPSERSGA CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAQNQTPLGATAERSGRDDRPSAQAAPPDDPLAAPIAALRGSGGDAPARLARRDAATAVA CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC PSSAAGMPPSALAWFGDAQALTRGRWRPVAATSSAALPTAWTEVLSTDGRPLGRVAILEG CCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC ALWWQPAGTDGRIWRAPLPAGDAAQRLAATLASGALDRSPPP CCEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA