| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265271
Identifier: 124265271
GI number: 124265271
Start: 72947
End: 74248
Strand: Direct
Name: 124265271
Synonym: Mpe_A0078
Alternate gene names: NA
Gene position: 72947-74248 (Clockwise)
Preceding gene: 124265270
Following gene: 124265277
Centisome position: 1.8
GC content: 69.89
Gene sequence:
>1302_bases ATGCCAGAGTCGCCGTCACACCCGAACAACCGCTCGCCCGCCGCACCGCGCCGCGTCGATCTTGCTCTGCAGGGTGGAGG GTCCCACGGTGCCTTCACCTGGGGCGTGCTCGACCGGCTGCTCGAGGACGACGCGGTCGAGATCTCCGCGATCTCGGGCA CCAGTGCCGGCGCGCTCAACGCCGCCGTGCTGGCGACGGGACATGCCCGTGGCGGCCGCGCCGGCGCGCGCGCGGCACTC ACGGCCTTCTGGCACGACGTCAGCACCAGCAGCCAGATCTTCTCGCCGTTCTCGCTGAGCCAAGCCAGTGCGGCCGGCAG CAGCTTCAACTTCGACAAGCTGCCGAGCTACCAGTGGCTCAACAGCTTCTTTCGCGCCTTCAGCCCCTATGAGTTCAACC CGCTGAACCTGAACCCGCTGCGCGACGTGGCCCGGCGGCATGTCGACGAGGACGCGCTGCGGCGTTGCGACATCCCGCTG TTCATCACGGCTACCAGCGTGCGCAGCGGCCAGGCCCACGTCTTCACCGGCAAGGACCTGTCGATCGATGCGCTGCTGGC CTCCGCCTGCCTGCCGTTCATCTTCCAGGCCGTGACGATCGACGGGGAGGCCTACTGGGATGGCGGCTACACCGGCAACC CGGCGATCTACCCGCTGATCTACAACACCGAGACGCTCGACATCCTGCTGGTGAAGATCAACCCGCTGCAGCACGAGGGG ACGCCGACCCGCAGTGTCGAGATCATCGACCGCCTGTCCGAGATCACCTTCAACGCCAGCCTGGTGGCCGAGATGCGCGC GATCGCCTTCGTGTCGCGCCTGGTGCGCGAGGGCCGGCTGGAGGCCGGCCACTACAAGGACCTGCGCCTGCACATGATCG CCGACGACGAAGGCCTGGCGCCGTTCAACGCGAGCAGCAAGTTCAACACCGACCGGGTGTTCCTCGACGGCTTGTTCGAG CTCGGGCGTCGGGCCGCGGACCAGTGGCTGAAGAAGCATGGCGACGACATCGGCGTGCGCTCGACGCTGGATGTGGAGCG CAGCTTCCTCGAGAAGCCGGCCCGCAACGGCCAGCGCCGCGCGCCCCGCCCGCGCGCGGTGCGGCCTCCGGCAGCGCCGC CGATGCCCGCGGTCGACGAGCCGGCGCTGGTCGCCCCGCCCGCTGCAACCATTGCACCCGTCGTACCCGAGGTGCACTCG CCAGTGCCCGCGCCACCTGCGGCGCGGCCAGCCGTGGCGCGGCCGCGCCTGCCTTCCCTCCTGTCGCGCTGGATCAAGCG TCCACGCAAGCCGCCGCGCTGA
Upstream 100 bases:
>100_bases CAACCCGGCTTAGTCCCGGCCGACGCCAAGGAGGGTTGTTTGCTGCAATGCAGCATTCGTCGGGGCGCCGGCGTAGACTG GACGCCAGCCGGGAGATGCC
Downstream 100 bases:
>100_bases GTCCGTCGCCGGCCGTTCAGCTCTGCATCAGCCGCTTGCTGCGCGCCACCGACATCAGGATGCCGAGCGCGAGACCCAGC GTGACCATCGCCGTGCCGCC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Patatin Family Phospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Esterase; Serine Protease; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; FabD/Lysophospholipase; Transmembrane Protein; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MPESPSHPNNRSPAAPRRVDLALQGGGSHGAFTWGVLDRLLEDDAVEISAISGTSAGALNAAVLATGHARGGRAGARAAL TAFWHDVSTSSQIFSPFSLSQASAAGSSFNFDKLPSYQWLNSFFRAFSPYEFNPLNLNPLRDVARRHVDEDALRRCDIPL FITATSVRSGQAHVFTGKDLSIDALLASACLPFIFQAVTIDGEAYWDGGYTGNPAIYPLIYNTETLDILLVKINPLQHEG TPTRSVEIIDRLSEITFNASLVAEMRAIAFVSRLVREGRLEAGHYKDLRLHMIADDEGLAPFNASSKFNTDRVFLDGLFE LGRRAADQWLKKHGDDIGVRSTLDVERSFLEKPARNGQRRAPRPRAVRPPAAPPMPAVDEPALVAPPAATIAPVVPEVHS PVPAPPAARPAVARPRLPSLLSRWIKRPRKPPR
Sequences:
>Translated_433_residues MPESPSHPNNRSPAAPRRVDLALQGGGSHGAFTWGVLDRLLEDDAVEISAISGTSAGALNAAVLATGHARGGRAGARAAL TAFWHDVSTSSQIFSPFSLSQASAAGSSFNFDKLPSYQWLNSFFRAFSPYEFNPLNLNPLRDVARRHVDEDALRRCDIPL FITATSVRSGQAHVFTGKDLSIDALLASACLPFIFQAVTIDGEAYWDGGYTGNPAIYPLIYNTETLDILLVKINPLQHEG TPTRSVEIIDRLSEITFNASLVAEMRAIAFVSRLVREGRLEAGHYKDLRLHMIADDEGLAPFNASSKFNTDRVFLDGLFE LGRRAADQWLKKHGDDIGVRSTLDVERSFLEKPARNGQRRAPRPRAVRPPAAPPMPAVDEPALVAPPAATIAPVVPEVHS PVPAPPAARPAVARPRLPSLLSRWIKRPRKPPR >Mature_432_residues PESPSHPNNRSPAAPRRVDLALQGGGSHGAFTWGVLDRLLEDDAVEISAISGTSAGALNAAVLATGHARGGRAGARAALT AFWHDVSTSSQIFSPFSLSQASAAGSSFNFDKLPSYQWLNSFFRAFSPYEFNPLNLNPLRDVARRHVDEDALRRCDIPLF ITATSVRSGQAHVFTGKDLSIDALLASACLPFIFQAVTIDGEAYWDGGYTGNPAIYPLIYNTETLDILLVKINPLQHEGT PTRSVEIIDRLSEITFNASLVAEMRAIAFVSRLVREGRLEAGHYKDLRLHMIADDEGLAPFNASSKFNTDRVFLDGLFEL GRRAADQWLKKHGDDIGVRSTLDVERSFLEKPARNGQRRAPRPRAVRPPAAPPMPAVDEPALVAPPAATIAPVVPEVHSP VPAPPAARPAVARPRLPSLLSRWIKRPRKPPR
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47142; Mature: 47011
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESPSHPNNRSPAAPRRVDLALQGGGSHGAFTWGVLDRLLEDDAVEISAISGTSAGALN CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC AAVLATGHARGGRAGARAALTAFWHDVSTSSQIFSPFSLSQASAAGSSFNFDKLPSYQWL EEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCHHCCCCHHHH NSFFRAFSPYEFNPLNLNPLRDVARRHVDEDALRRCDIPLFITATSVRSGQAHVFTGKDL HHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCEEEEECCCC SIDALLASACLPFIFQAVTIDGEAYWDGGYTGNPAIYPLIYNTETLDILLVKINPLQHEG CHHHHHHHHHHHHHHHHEEECCEEEECCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCC TPTRSVEIIDRLSEITFNASLVAEMRAIAFVSRLVREGRLEAGHYKDLRLHMIADDEGLA CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC PFNASSKFNTDRVFLDGLFELGRRAADQWLKKHGDDIGVRSTLDVERSFLEKPARNGQRR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC APRPRAVRPPAAPPMPAVDEPALVAPPAATIAPVVPEVHSPVPAPPAARPAVARPRLPSL CCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHH LSRWIKRPRKPPR HHHHHHCCCCCCC >Mature Secondary Structure PESPSHPNNRSPAAPRRVDLALQGGGSHGAFTWGVLDRLLEDDAVEISAISGTSAGALN CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC AAVLATGHARGGRAGARAALTAFWHDVSTSSQIFSPFSLSQASAAGSSFNFDKLPSYQWL EEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCHHCCCCHHHH NSFFRAFSPYEFNPLNLNPLRDVARRHVDEDALRRCDIPLFITATSVRSGQAHVFTGKDL HHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCEEEEECCCC SIDALLASACLPFIFQAVTIDGEAYWDGGYTGNPAIYPLIYNTETLDILLVKINPLQHEG CHHHHHHHHHHHHHHHHEEECCEEEECCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCC TPTRSVEIIDRLSEITFNASLVAEMRAIAFVSRLVREGRLEAGHYKDLRLHMIADDEGLA CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC PFNASSKFNTDRVFLDGLFELGRRAADQWLKKHGDDIGVRSTLDVERSFLEKPARNGQRR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC APRPRAVRPPAAPPMPAVDEPALVAPPAATIAPVVPEVHSPVPAPPAARPAVARPRLPSL CCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHH LSRWIKRPRKPPR HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA