Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265259

Identifier: 124265259

GI number: 124265259

Start: 60884

End: 61687

Strand: Reverse

Name: 124265259

Synonym: Mpe_A0066

Alternate gene names: NA

Gene position: 61687-60884 (Counterclockwise)

Preceding gene: 124265260

Following gene: 124265258

Centisome position: 1.53

GC content: 70.65

Gene sequence:

>804_bases
ATGAGCCGCGCCCCCGTGCGCCTGCAGGTGCTCGGCTGCTCCGGCTCCATCGCCTCGGGCAGCCGCACCACTGCCTTCCT
GCTCGACGACAACGTGCTGATCGACGCCGGCACCGGCGTGGGCGACCTGGCCCTCGACGCGATGGCCCGCGTGGACGACA
TCCTCGTCTCGCATTCCCATCTCGATCATGTGCTGGCCATCCCGCTGCTCGCCGACAGCGTGATGAAGCTGCGGCTGGCG
CAGCCCGAACGCGGACCGATCCGCGTGCACGGACTGCCCGAGACGCTGGCGGCGCTGCGCGCCCACCTCTTCAATGGCCA
GCTCTGGCCCGACTTCACCAGCATCCCGAGCGCCGCCTACCCGATCATCCGGCTGCTGCCCTTCGCCATTGGCGACACCC
TGCGCTTCGGCCGCGGCGATGCCGAGCGGCACGTGGAGGTGCTGCCGGCATCGCACACCGTGCCGGCCTGCGGCTTCGCC
GTCGACAGCGAAGAAGGCTGGTGGGTCTACAGCGGCGACACCGGCTCCAACCCGGCGCTGTGGGCGGCGCTGAAGGGCCG
CCGCATCGCTCACCTCATCATCGAGACTGCCTTCGGCGACGACGAGCGCTGGCTCGCCGACCTGAGCGGCCACCTCGCGC
CCAGCAGCCTGGCCACCGAGCTGGCCCAGCTGGACGGCAGCGTGCCGGTGCACATCACCCATCCCAAGCCCGGCGAGGTG
GCGGCAGTGGTGGCGCAGATCCGGGCCATCGACACGGCGCATCGGGTGGAGCCGTTGGTGAAGGGGTTGGTGTTCACCCT
TTGA

Upstream 100 bases:

>100_bases
GCGCAGCGCTTGCCCGCCGTTCGCCCCGGCGGCACCATCCCTGGGTGACGTTTCCCGTTCTGCCGACCCCTGCCGCCGCT
ACCGCGACGGTGGTATCTCC

Downstream 100 bases:

>100_bases
GCGCGCTTCGCGATGCGACCAAAAGTGTCGACATCGGATGGCCACGGTTCCTCAAATCAGCGTCCCATGTGACGTGATCT
GTCCCAGTTTCACCGCCATG

Product: cAMP phosphodiesterase

Products: NA

Alternate protein names: Cyclic-AMP Phosphodiesterase; Metal Dependent Phosphohydrolase; CAMP Phosphodiesterase; Beta-Lactamase Domain-Containing Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; CAMP Phosphodiesterase Class-II; Beta-Lactamase-Like; Camp Phosphodiesterases Class-Ii; Response Regulator; Cyclic-AMP Phosphodiesterase Class-II; CAMP Phosphodiesterase-Like Protein; GAF Domain Protein; Beta-Lactamase-Like Protein; CAMP Phosphodiesterases Class-II; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Metal-Dependent Hydrolase

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSRAPVRLQVLGCSGSIASGSRTTAFLLDDNVLIDAGTGVGDLALDAMARVDDILVSHSHLDHVLAIPLLADSVMKLRLA
QPERGPIRVHGLPETLAALRAHLFNGQLWPDFTSIPSAAYPIIRLLPFAIGDTLRFGRGDAERHVEVLPASHTVPACGFA
VDSEEGWWVYSGDTGSNPALWAALKGRRIAHLIIETAFGDDERWLADLSGHLAPSSLATELAQLDGSVPVHITHPKPGEV
AAVVAQIRAIDTAHRVEPLVKGLVFTL

Sequences:

>Translated_267_residues
MSRAPVRLQVLGCSGSIASGSRTTAFLLDDNVLIDAGTGVGDLALDAMARVDDILVSHSHLDHVLAIPLLADSVMKLRLA
QPERGPIRVHGLPETLAALRAHLFNGQLWPDFTSIPSAAYPIIRLLPFAIGDTLRFGRGDAERHVEVLPASHTVPACGFA
VDSEEGWWVYSGDTGSNPALWAALKGRRIAHLIIETAFGDDERWLADLSGHLAPSSLATELAQLDGSVPVHITHPKPGEV
AAVVAQIRAIDTAHRVEPLVKGLVFTL
>Mature_266_residues
SRAPVRLQVLGCSGSIASGSRTTAFLLDDNVLIDAGTGVGDLALDAMARVDDILVSHSHLDHVLAIPLLADSVMKLRLAQ
PERGPIRVHGLPETLAALRAHLFNGQLWPDFTSIPSAAYPIIRLLPFAIGDTLRFGRGDAERHVEVLPASHTVPACGFAV
DSEEGWWVYSGDTGSNPALWAALKGRRIAHLIIETAFGDDERWLADLSGHLAPSSLATELAQLDGSVPVHITHPKPGEVA
AVVAQIRAIDTAHRVEPLVKGLVFTL

Specific function: Unknown

COG id: COG5212

COG function: function code T; Low-affinity cAMP phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28500; Mature: 28369

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAPVRLQVLGCSGSIASGSRTTAFLLDDNVLIDAGTGVGDLALDAMARVDDILVSHSH
CCCCCEEEEEEECCCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LDHVLAIPLLADSVMKLRLAQPERGPIRVHGLPETLAALRAHLFNGQLWPDFTSIPSAAY
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHCCCCHHH
PIIRLLPFAIGDTLRFGRGDAERHVEVLPASHTVPACGFAVDSEEGWWVYSGDTGSNPAL
HHHHHHHHHHCCCHHCCCCCHHCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCEE
WAALKGRRIAHLIIETAFGDDERWLADLSGHLAPSSLATELAQLDGSVPVHITHPKPGEV
EEECCCCEEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCHH
AAVVAQIRAIDTAHRVEPLVKGLVFTL
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRAPVRLQVLGCSGSIASGSRTTAFLLDDNVLIDAGTGVGDLALDAMARVDDILVSHSH
CCCCEEEEEEECCCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LDHVLAIPLLADSVMKLRLAQPERGPIRVHGLPETLAALRAHLFNGQLWPDFTSIPSAAY
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHCCCCHHH
PIIRLLPFAIGDTLRFGRGDAERHVEVLPASHTVPACGFAVDSEEGWWVYSGDTGSNPAL
HHHHHHHHHHCCCHHCCCCCHHCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCEE
WAALKGRRIAHLIIETAFGDDERWLADLSGHLAPSSLATELAQLDGSVPVHITHPKPGEV
EEECCCCEEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCHH
AAVVAQIRAIDTAHRVEPLVKGLVFTL
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA