Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265235

Identifier: 124265235

GI number: 124265235

Start: 41334

End: 42218

Strand: Reverse

Name: 124265235

Synonym: Mpe_A0042

Alternate gene names: NA

Gene position: 42218-41334 (Counterclockwise)

Preceding gene: 124265236

Following gene: 124265230

Centisome position: 1.04

GC content: 73.45

Gene sequence:

>885_bases
GTGAAGCTGCCGCGCTGGGACCGCGTGGCGGTTCGCGCCTGGACGCTGTGGGCCGAGCAGCGCATCGGCCGCACCGCCGC
CGCGCTGGCGTTCTACACGCTGTTCTCGCTCGCGCCGATCCTCGTGATCGCCACCGCTGTGGCCGGCGCGGTGTGGGGGC
GCGAGGCGGTGCAAGGGGACCTGGTGACGCAGCTGTCGCGCGTGGTCGGCACCGAGGGCGGCCGGCTGCTGCAGGAGATG
ATCGCCAACGCCTACCGCTCGACCCGCGGCGCCTGGGCCACGCTGGCGGCCGTCGGCGCCACGCTGTTCGGCGCCAGTGC
GGTGTTCGCCGAGTTGCGCGCCGCCTTCGAGCAGCTGTGGCGCCGTGACGGCGCGCCCGATCTGCCGCTCGGCCGGCTGC
TGGCAGCGCTGGTGTCGGCCCGGCTGCGTGGCGTGGCGGTGGTGATCGGCATCGGCTTCGTGCTGCTCGCGTCGCTGGTG
GTGAACTCGCTGCTCGTCTCGCTGGGCGGTGCCTTCACGCCGATGCTGGCCGGCGGGTTGCTGCAGGCCGGTTGGTTGCT
GGTGCTGCCGTGGCTGGTGTCCTTCGCCGTCACGGTGACGATGGTCGCACTGCTGCTGCGCGTGATGCTGCCGGTGCGGT
TGCCGCGTCGGCAGCTCGGCGGCGTGGCGGTGTTCGGCGCGCTCGCCTTCGAGGCGGCCAAGGGCCTGGTCAGCGTCTAC
CTCGGCCACAGCGCGGTGGTGTCGACCTTCGGCGCCGCCGGCTCGGTGGCGATCCTGCTGGTGTGGCTCTACGTCGTGGC
CTGCGTCGTGCTGCTGTGCGCCGTGCTGCTGCGCGCGATGTCACACGACGCCACGCCGAAGTTCGACGGCGCCGGCGGGC
CGTGA

Upstream 100 bases:

>100_bases
CGAGGCGGTCCGCACCTGGGAAGAGGAAGGCGGCGCCGTGAAGCCGGCCGATCCTCCAGCCCGGCCCTCGCCCCGCGCCA
CCACGCATTGAGTCGCCGCG

Downstream 100 bases:

>100_bases
CGGCAACGGCTCAGCGTGTCGCCAGCTCGCCGATCGCCCGGGCAATGTCGCCCGACACCGCCGCCATCGCCTCCACGTGC
GCGGCGGCCAGCGCGTCGTA

Product: BrkB-like serum-resistance protein

Products: NA

Alternate protein names: Ribonuclease; Ribonuclease RNAse BN Transmembrane Protein; Exoribonuclease II; BrkB-Like Serum-Resistance Protein; Exoribonuclease BN Transmembrane Protein; Ribonuclease BN-Like Family Protein; Ribonuclease Bn; YihY Family Protein; Ribonuclease BN-Like Family; BrkB Transmembrane Protein; Serum Resistance Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSRVVGTEGGRLLQEM
IANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLV
VNSLLVSLGGAFTPMLAGGLLQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY
LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP

Sequences:

>Translated_294_residues
MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSRVVGTEGGRLLQEM
IANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLV
VNSLLVSLGGAFTPMLAGGLLQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY
LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP
>Mature_294_residues
MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSRVVGTEGGRLLQEM
IANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLV
VNSLLVSLGGAFTPMLAGGLLQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY
LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30839; Mature: 30839

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA