| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265235
Identifier: 124265235
GI number: 124265235
Start: 41334
End: 42218
Strand: Reverse
Name: 124265235
Synonym: Mpe_A0042
Alternate gene names: NA
Gene position: 42218-41334 (Counterclockwise)
Preceding gene: 124265236
Following gene: 124265230
Centisome position: 1.04
GC content: 73.45
Gene sequence:
>885_bases GTGAAGCTGCCGCGCTGGGACCGCGTGGCGGTTCGCGCCTGGACGCTGTGGGCCGAGCAGCGCATCGGCCGCACCGCCGC CGCGCTGGCGTTCTACACGCTGTTCTCGCTCGCGCCGATCCTCGTGATCGCCACCGCTGTGGCCGGCGCGGTGTGGGGGC GCGAGGCGGTGCAAGGGGACCTGGTGACGCAGCTGTCGCGCGTGGTCGGCACCGAGGGCGGCCGGCTGCTGCAGGAGATG ATCGCCAACGCCTACCGCTCGACCCGCGGCGCCTGGGCCACGCTGGCGGCCGTCGGCGCCACGCTGTTCGGCGCCAGTGC GGTGTTCGCCGAGTTGCGCGCCGCCTTCGAGCAGCTGTGGCGCCGTGACGGCGCGCCCGATCTGCCGCTCGGCCGGCTGC TGGCAGCGCTGGTGTCGGCCCGGCTGCGTGGCGTGGCGGTGGTGATCGGCATCGGCTTCGTGCTGCTCGCGTCGCTGGTG GTGAACTCGCTGCTCGTCTCGCTGGGCGGTGCCTTCACGCCGATGCTGGCCGGCGGGTTGCTGCAGGCCGGTTGGTTGCT GGTGCTGCCGTGGCTGGTGTCCTTCGCCGTCACGGTGACGATGGTCGCACTGCTGCTGCGCGTGATGCTGCCGGTGCGGT TGCCGCGTCGGCAGCTCGGCGGCGTGGCGGTGTTCGGCGCGCTCGCCTTCGAGGCGGCCAAGGGCCTGGTCAGCGTCTAC CTCGGCCACAGCGCGGTGGTGTCGACCTTCGGCGCCGCCGGCTCGGTGGCGATCCTGCTGGTGTGGCTCTACGTCGTGGC CTGCGTCGTGCTGCTGTGCGCCGTGCTGCTGCGCGCGATGTCACACGACGCCACGCCGAAGTTCGACGGCGCCGGCGGGC CGTGA
Upstream 100 bases:
>100_bases CGAGGCGGTCCGCACCTGGGAAGAGGAAGGCGGCGCCGTGAAGCCGGCCGATCCTCCAGCCCGGCCCTCGCCCCGCGCCA CCACGCATTGAGTCGCCGCG
Downstream 100 bases:
>100_bases CGGCAACGGCTCAGCGTGTCGCCAGCTCGCCGATCGCCCGGGCAATGTCGCCCGACACCGCCGCCATCGCCTCCACGTGC GCGGCGGCCAGCGCGTCGTA
Product: BrkB-like serum-resistance protein
Products: NA
Alternate protein names: Ribonuclease; Ribonuclease RNAse BN Transmembrane Protein; Exoribonuclease II; BrkB-Like Serum-Resistance Protein; Exoribonuclease BN Transmembrane Protein; Ribonuclease BN-Like Family Protein; Ribonuclease Bn; YihY Family Protein; Ribonuclease BN-Like Family; BrkB Transmembrane Protein; Serum Resistance Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSRVVGTEGGRLLQEM IANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLV VNSLLVSLGGAFTPMLAGGLLQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP
Sequences:
>Translated_294_residues MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSRVVGTEGGRLLQEM IANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLV VNSLLVSLGGAFTPMLAGGLLQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP >Mature_294_residues MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSRVVGTEGGRLLQEM IANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLV VNSLLVSLGGAFTPMLAGGLLQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP
Specific function: Unknown
COG id: COG1295
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30839; Mature: 30839
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTQLSRVVGTEGGRLLQEMIANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLW HHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLVVNSLLVSLGGAFTPMLAGGL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHH LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKLPRWDRVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTQLSRVVGTEGGRLLQEMIANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLW HHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDGAPDLPLGRLLAALVSARLRGVAVVIGIGFVLLASLVVNSLLVSLGGAFTPMLAGGL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQAGWLLVLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHH LGHSAVVSTFGAAGSVAILLVWLYVVACVVLLCAVLLRAMSHDATPKFDGAGGP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA