Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265203

Identifier: 124265203

GI number: 124265203

Start: 11121

End: 12272

Strand: Direct

Name: 124265203

Synonym: Mpe_A0010

Alternate gene names: NA

Gene position: 11121-12272 (Clockwise)

Preceding gene: 124265201

Following gene: 124265204

Centisome position: 0.27

GC content: 70.14

Gene sequence:

>1152_bases
ATGCGCACCGCCGGCACCTACGTCACCACCACCACGCTGGGCGAGGCGGTGCAGGCGTTCGTGCCCCATCCGCTGCCGCC
GGCCGACCCGCCGCTGGCTGCTGAGGGCTACGCAGCAGCCAGCCGCCGCGCCGAGATGGCGCTGGCTCGGCTGGGCGGCG
TGGCCGGCCTGGTGCCTTCGGTCGACTGGCTGCTCTACAGCGCCATCCGCAAGGAGGCGCTGCTCACCTCGCAGATCGAG
GGCACCCAGGCCACGCTGACCGACCTGTTCGACGACGAGGCCGGCCAGGTGCTGGCCAACACTGCCGATGTCGAGGAGGT
GACCAACTACCTGCGTGCCTTCCGCCTCGTGCGCGACAACCTGCGCAGCGAGGCCGGCCTGCCGATTTCGGTGCGCTTGC
TGTGCGACGCCCACAGGCTGCTGCTCGACGGCGCACGCGGCGCTGGCAAGCAGCCGGGAGAACTCCGACGCTCGCAGAAC
TGGATCGGCGGCGCTCGGCCGGGCCGTGCGGCCTTCGTGCCGCCGCCACCGGACCAGGTTCCGGGACTGCTGGCCGACCT
GGAGCGCTTCATCCATGACCCGGAGCCTGCGCTGCCACCCCTCGTGCGCGTGGCCCTGGTGCACGTGCAGTTCGAGACCA
TCCACCCGTTCCTCGACGGCAACGGGCGCATCGGACGGCTGCTGATTGCCGCCTTGTTGGAGCAGTGGGGCCTGCTGCCC
GAGCCGCTGGTCTACCTGAGCGGCTACCTCAAGCAGCACCAGGCCGAGTACTACCGGCGGCTGTCGGCCGTGCGCACCGA
GGGCGACTGGGAGGGCTGGGTCGGCTTCTTCCTCGATGGCGTGGAGACCGCGGCAACAGACGCCGAGCGCGGCATCGTCG
CGATGGCGAGCCTGATCAACGCTGACCGCAAGCACCTGCTGGCTGCGCCCCGCGTGGGCGCGGTGGCGCTGCGCCTGTTC
GAGTTGCTGCCGCTGATGCCGCGGTTCACCATCGAACAGGTGCGGCAGAAGTTGGACACCACCTTCCCCACGGCCACGGC
GGCGGTGAAGCTGCTGCACGACCTGGGGATGCTGAGCGAGCTGACCGGCCAGAAGAAGAACCGCCTGTTCAGCTACGCTG
CCTATGTCGAACTGCTGGCAGGGAGCCCATGA

Upstream 100 bases:

>100_bases
GCTGCTGCGGCAGCCCCCCGCAAGCTTGCTTTCGCAGGCTTTCCATAAATTAAAGAACGCTTTACTATGAAAGCCTGCTG
CTCAAGCAAGCTTTCATACG

Downstream 100 bases:

>100_bases
CGGAGGACCAGCTCGAACAAGAGTGCCTGGCGTGGCTGGCCGACGTGGGCTGGCAACACCGCTATGGGCCGGACATCGCG
CCCGATGGCGACGCCCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRTAGTYVTTTTLGEAVQAFVPHPLPPADPPLAAEGYAAASRRAEMALARLGGVAGLVPSVDWLLYSAIRKEALLTSQIE
GTQATLTDLFDDEAGQVLANTADVEEVTNYLRAFRLVRDNLRSEAGLPISVRLLCDAHRLLLDGARGAGKQPGELRRSQN
WIGGARPGRAAFVPPPPDQVPGLLADLERFIHDPEPALPPLVRVALVHVQFETIHPFLDGNGRIGRLLIAALLEQWGLLP
EPLVYLSGYLKQHQAEYYRRLSAVRTEGDWEGWVGFFLDGVETAATDAERGIVAMASLINADRKHLLAAPRVGAVALRLF
ELLPLMPRFTIEQVRQKLDTTFPTATAAVKLLHDLGMLSELTGQKKNRLFSYAAYVELLAGSP

Sequences:

>Translated_383_residues
MRTAGTYVTTTTLGEAVQAFVPHPLPPADPPLAAEGYAAASRRAEMALARLGGVAGLVPSVDWLLYSAIRKEALLTSQIE
GTQATLTDLFDDEAGQVLANTADVEEVTNYLRAFRLVRDNLRSEAGLPISVRLLCDAHRLLLDGARGAGKQPGELRRSQN
WIGGARPGRAAFVPPPPDQVPGLLADLERFIHDPEPALPPLVRVALVHVQFETIHPFLDGNGRIGRLLIAALLEQWGLLP
EPLVYLSGYLKQHQAEYYRRLSAVRTEGDWEGWVGFFLDGVETAATDAERGIVAMASLINADRKHLLAAPRVGAVALRLF
ELLPLMPRFTIEQVRQKLDTTFPTATAAVKLLHDLGMLSELTGQKKNRLFSYAAYVELLAGSP
>Mature_383_residues
MRTAGTYVTTTTLGEAVQAFVPHPLPPADPPLAAEGYAAASRRAEMALARLGGVAGLVPSVDWLLYSAIRKEALLTSQIE
GTQATLTDLFDDEAGQVLANTADVEEVTNYLRAFRLVRDNLRSEAGLPISVRLLCDAHRLLLDGARGAGKQPGELRRSQN
WIGGARPGRAAFVPPPPDQVPGLLADLERFIHDPEPALPPLVRVALVHVQFETIHPFLDGNGRIGRLLIAALLEQWGLLP
EPLVYLSGYLKQHQAEYYRRLSAVRTEGDWEGWVGFFLDGVETAATDAERGIVAMASLINADRKHLLAAPRVGAVALRLF
ELLPLMPRFTIEQVRQKLDTTFPTATAAVKLLHDLGMLSELTGQKKNRLFSYAAYVELLAGSP

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fido domain [H]

Homologues:

Organism=Drosophila melanogaster, GI24582217, Length=160, Percent_Identity=32.5, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003812 [H]

Pfam domain/function: PF02661 Fic [H]

EC number: NA

Molecular weight: Translated: 41726; Mature: 41726

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAGTYVTTTTLGEAVQAFVPHPLPPADPPLAAEGYAAASRRAEMALARLGGVAGLVPS
CCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VDWLLYSAIRKEALLTSQIEGTQATLTDLFDDEAGQVLANTADVEEVTNYLRAFRLVRDN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
LRSEAGLPISVRLLCDAHRLLLDGARGAGKQPGELRRSQNWIGGARPGRAAFVPPPPDQV
HHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHC
PGLLADLERFIHDPEPALPPLVRVALVHVQFETIHPFLDGNGRIGRLLIAALLEQWGLLP
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCC
EPLVYLSGYLKQHQAEYYRRLSAVRTEGDWEGWVGFFLDGVETAATDAERGIVAMASLIN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRKHLLAAPRVGAVALRLFELLPLMPRFTIEQVRQKLDTTFPTATAAVKLLHDLGMLSE
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LTGQKKNRLFSYAAYVELLAGSP
HHCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTAGTYVTTTTLGEAVQAFVPHPLPPADPPLAAEGYAAASRRAEMALARLGGVAGLVPS
CCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VDWLLYSAIRKEALLTSQIEGTQATLTDLFDDEAGQVLANTADVEEVTNYLRAFRLVRDN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
LRSEAGLPISVRLLCDAHRLLLDGARGAGKQPGELRRSQNWIGGARPGRAAFVPPPPDQV
HHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHC
PGLLADLERFIHDPEPALPPLVRVALVHVQFETIHPFLDGNGRIGRLLIAALLEQWGLLP
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCC
EPLVYLSGYLKQHQAEYYRRLSAVRTEGDWEGWVGFFLDGVETAATDAERGIVAMASLIN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRKHLLAAPRVGAVALRLFELLPLMPRFTIEQVRQKLDTTFPTATAAVKLLHDLGMLSE
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LTGQKKNRLFSYAAYVELLAGSP
HHCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]