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The map label for this gene is 124028489

Identifier: 124028489

GI number: 124028489

Start: 1644223

End: 1644819

Strand: Reverse

Name: 124028489

Synonym: Hbut_1650

Alternate gene names: NA

Gene position: 1644819-1644223 (Counterclockwise)

Preceding gene: 124028490

Following gene: 124028488

Centisome position: 98.66

GC content: 52.43

Gene sequence:

>597_bases
TTGGCACCAATAGCGGAGCTTAGGGGACGCAGGGTCTTCCCCGGCGAGCCGCTATGCACTATTGAAGAGTTTCTGCCTGG
TGACGGTGTCTACGTCGATGATGGCGTTATAAGGGCTGCAAGGTTCGGCCAGGTCGAGATAGACTTTGCTAACCGCCGCA
TAAGTGTCAAGCCGGTAACCGGTAAGCCTAGGCTACCTAGGAGGAATAGTGTTGTGTACGGTGTAGCTATTGGCGCACCA
CGCGAGGAACTAATGCTTGTAAAAATATTTGCTGATGAGAGGCTAGTACCCTACAACGGTAGTTTCACCGGCATACTCCA
CATACTACAGGCTAGTGATTCGCCGCAGCAAAGAAGCATATACGACTATGTAAAGCCAGGTGACATTCTCAGAGCGACAA
GCCTATCCCCAGCACCGGTCTACGTACTCTCCATAAAGAGGCCGCAGGATGGTGTCATAATGGCGTTCTGCTCGGTTTGC
GGAGCACCCCTACACCGTGTACCAGGGTCAAACAAGCTCGTATGCCTACGTTGCGGCAATGAAGAGCAGAGGAAGGTCTC
ACCCCTCTACGTGCTAACTGTTAGACGTAAGAGGTAG

Upstream 100 bases:

>100_bases
TAAACGCATGTCAAGAAGGTGCACCGTGTACCGGTTATTATACTCGCATCAGTAAGAGCAAATGGTGGCTAGGAGGAGGT
AAGTTGCCGGGATGACTGCT

Downstream 100 bases:

>100_bases
GAGGGGCCTAGGGGGTGTAGCTTGGCTTGCCAAGGGTTATAAAGAGGAAGCTTTACACGATAAACCTGCCGCCGGGAATC
CCCCTGGAGAAGATCTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAPIAELRGRRVFPGEPLCTIEEFLPGDGVYVDDGVIRAARFGQVEIDFANRRISVKPVTGKPRLPRRNSVVYGVAIGAP
REELMLVKIFADERLVPYNGSFTGILHILQASDSPQQRSIYDYVKPGDILRATSLSPAPVYVLSIKRPQDGVIMAFCSVC
GAPLHRVPGSNKLVCLRCGNEEQRKVSPLYVLTVRRKR

Sequences:

>Translated_198_residues
MAPIAELRGRRVFPGEPLCTIEEFLPGDGVYVDDGVIRAARFGQVEIDFANRRISVKPVTGKPRLPRRNSVVYGVAIGAP
REELMLVKIFADERLVPYNGSFTGILHILQASDSPQQRSIYDYVKPGDILRATSLSPAPVYVLSIKRPQDGVIMAFCSVC
GAPLHRVPGSNKLVCLRCGNEEQRKVSPLYVLTVRRKR
>Mature_197_residues
APIAELRGRRVFPGEPLCTIEEFLPGDGVYVDDGVIRAARFGQVEIDFANRRISVKPVTGKPRLPRRNSVVYGVAIGAPR
EELMLVKIFADERLVPYNGSFTGILHILQASDSPQQRSIYDYVKPGDILRATSLSPAPVYVLSIKRPQDGVIMAFCSVCG
APLHRVPGSNKLVCLRCGNEEQRKVSPLYVLTVRRKR

Specific function: Unknown

COG id: COG1096

COG function: function code J; Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21960; Mature: 21829

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPIAELRGRRVFPGEPLCTIEEFLPGDGVYVDDGVIRAARFGQVEIDFANRRISVKPVT
CCCCHHHCCCCCCCCCCCEEHHHHCCCCCEEECCCEEEEEECCEEEEEECCCEEEEEECC
GKPRLPRRNSVVYGVAIGAPREELMLVKIFADERLVPYNGSFTGILHILQASDSPQQRSI
CCCCCCCCCCEEEEEEECCCHHHEEEEEEECCCEEECCCCCHHHEEEEEECCCCCCCCCH
YDYVKPGDILRATSLSPAPVYVLSIKRPQDGVIMAFCSVCGAPLHRVPGSNKLVCLRCGN
HHCCCCCCEEEECCCCCCCEEEEEECCCCCCHHHEEHHHCCCCHHCCCCCCCEEEEECCC
EEQRKVSPLYVLTVRRKR
CHHHCCCCEEEEEEEECC
>Mature Secondary Structure 
APIAELRGRRVFPGEPLCTIEEFLPGDGVYVDDGVIRAARFGQVEIDFANRRISVKPVT
CCCHHHCCCCCCCCCCCEEHHHHCCCCCEEECCCEEEEEECCEEEEEECCCEEEEEECC
GKPRLPRRNSVVYGVAIGAPREELMLVKIFADERLVPYNGSFTGILHILQASDSPQQRSI
CCCCCCCCCCEEEEEEECCCHHHEEEEEEECCCEEECCCCCHHHEEEEEECCCCCCCCCH
YDYVKPGDILRATSLSPAPVYVLSIKRPQDGVIMAFCSVCGAPLHRVPGSNKLVCLRCGN
HHCCCCCCEEEECCCCCCCEEEEEECCCCCCHHHEEHHHCCCCHHCCCCCCCEEEEECCC
EEQRKVSPLYVLTVRRKR
CHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA