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The map label for this gene is rpl30e [H]

Identifier: 124028422

GI number: 124028422

Start: 1588119

End: 1588457

Strand: Direct

Name: rpl30e [H]

Synonym: Hbut_1576

Alternate gene names: 124028422

Gene position: 1588119-1588457 (Clockwise)

Preceding gene: 124028421

Following gene: 124028423

Centisome position: 95.26

GC content: 49.56

Gene sequence:

>339_bases
ATGAGTCAGGTTCAGGTTACGGATATCGAAAAGGAGCTTGTCAACGCCCTCAAAACAGGCAAGGTCATACTCGGCTCCCG
GAAAACGCTCAAGTACGTAAAACTTGGCAAGGCTAAGGCAGTAATTGTTGCTGCTAACGCCCCGCCAGAGATACGCAACG
ACATCCTATACTACGCTAAGCTAAGTGGAATCCCAGTCTACGTCTACCCGGGTACAAGTGTTGAGCTTGGCTCTGTTTGT
GGTAAACCATTTACAGTTGCAAGCCTCGCAATACTCGACCCAGGAAACTCTCGTATACTCGACCTCATAGAAGCCGCATC
ACAGACAAGTAGCGGGTGA

Upstream 100 bases:

>100_bases
TGTAGGCACCGGGATGGTTGAGGTACGTATGAGCCCGACCGCGCTAGCCAGAACAGTTAAGGGCTCCACCGGAGCCGGTG
CTGGGTCGGGGTGAGCCGTT

Downstream 100 bases:

>100_bases
AGGGGGAGAGGCTGAGCCTTGGCGAATATCAAGCTAACAGTTGAAGAAATGAAGTACATGGCACTACTTCAGGATCTAAC
CGGCGCAGTAGCCAGGGACT

Product: 50S ribosomal protein L30e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSQVQVTDIEKELVNALKTGKVILGSRKTLKYVKLGKAKAVIVAANAPPEIRNDILYYAKLSGIPVYVYPGTSVELGSVC
GKPFTVASLAILDPGNSRILDLIEAASQTSSG

Sequences:

>Translated_112_residues
MSQVQVTDIEKELVNALKTGKVILGSRKTLKYVKLGKAKAVIVAANAPPEIRNDILYYAKLSGIPVYVYPGTSVELGSVC
GKPFTVASLAILDPGNSRILDLIEAASQTSSG
>Mature_111_residues
SQVQVTDIEKELVNALKTGKVILGSRKTLKYVKLGKAKAVIVAANAPPEIRNDILYYAKLSGIPVYVYPGTSVELGSVCG
KPFTVASLAILDPGNSRILDLIEAASQTSSG

Specific function: Unknown

COG id: COG1911

COG function: function code J; Ribosomal protein L30E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30e family [H]

Homologues:

Organism=Homo sapiens, GI4506631, Length=92, Percent_Identity=45.6521739130435, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17508679, Length=98, Percent_Identity=42.8571428571429, Blast_Score=85, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6321408, Length=93, Percent_Identity=40.8602150537634, Blast_Score=73, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17864264, Length=90, Percent_Identity=46.6666666666667, Blast_Score=89, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24585096, Length=90, Percent_Identity=46.6666666666667, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000231
- InterPro:   IPR022991
- InterPro:   IPR004038 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 11834; Mature: 11703

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00709 RIBOSOMAL_L30E_1 ; PS00993 RIBOSOMAL_L30E_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVQVTDIEKELVNALKTGKVILGSRKTLKYVKLGKAKAVIVAANAPPEIRNDILYYAK
CCCCEECHHHHHHHHHHHCCEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHCEEEEEE
LSGIPVYVYPGTSVELGSVCGKPFTVASLAILDPGNSRILDLIEAASQTSSG
ECCEEEEEECCCCEEEHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQVQVTDIEKELVNALKTGKVILGSRKTLKYVKLGKAKAVIVAANAPPEIRNDILYYAK
CCCEECHHHHHHHHHHHCCEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHCEEEEEE
LSGIPVYVYPGTSVELGSVCGKPFTVASLAILDPGNSRILDLIEAASQTSSG
ECCEEEEEECCCCEEEHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]