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The map label for this gene is 124028362

Identifier: 124028362

GI number: 124028362

Start: 1522418

End: 1523989

Strand: Reverse

Name: 124028362

Synonym: Hbut_1515

Alternate gene names: NA

Gene position: 1523989-1522418 (Counterclockwise)

Preceding gene: 124028363

Following gene: 124028361

Centisome position: 91.41

GC content: 58.52

Gene sequence:

>1572_bases
TTGTCGGGGCTGCGGCGTAGGAGCATGAGGCTAGACCTTGAGGGGTTCCAGAGGCGGAAGCGTAGCGGCGCGCTACTCGT
AGTCTTGGTGACCATATCTGCTGTTGTAGTGTTCTCGCTGCTTGTGTACATGGAGGGAGATTCCAAGGTCTACCTCAAGG
TTTCGGGGAACAGTATACCGAACCTTGCTGCTCTCGAGAAGCTCCTAGAGGAGACGGAGAAGCCAGTGGCTGTAATGTTT
GAGGCTCCCAGCTGCCCGGTGTGCAGGAAGATGTACCCGTACTGGGCCCGGCTGGAGGAGGCTAGTAGCCAGCTCCCCGT
AGAGTTCTACCACATAATGTACAGTGGTGAAAGCGACCCCGCTTTTCGCCGCTATGGCGTCTCCGAGACTCCGACCTTCA
TAGTCTTCGTTGACGGTAAACCGGTTGCAAGGCATGTGGGGGGCTTTTGGGGCGGAAACATAACCGAGGCTATGCTATCC
TGGGCCCTTTCAGCTGCCGGGCTTGCTGTGGCCTCTAACCCGGAGAGGCTTGCCTCTGAGGGCCTCCAGGTCTTCAACTC
TAGATGCGCAGTATGCCACGGCCACATAGAAGGTATCGACACTGAATCGTTGAGGGTTTGGCTTGAGTCGCGTAGGGCTG
TGGCAGGCGACATGCTTGCCGAGAGGCTTGTCGAAGCGTTGAGGTCTAATCGGACGCTAAGCGAGCTCTACGGTGGCTAC
AACTTGCTCCACGAGGCTGTAGCTGGCATGAGGAAGTATGTACAGGACCTCACATCCTACGAGGTTGATAGGGCTACGTA
CCTGCTAGAGTACATCTCTGCTATGCTGCTCGGCAGGGAGCCGCCTAGACTCTTCAACGACACGCTTGAAGCTATGGCTG
TGGAGCCCGGGCCTGGCGAGGCTACAGTCATCAGTGTAACGGCTAGCGGGAGTCAGCAGCTAGTAGGGCTTGTAGGTGCA
CTAGCAGCCTTTGCAGCTGGTTTTGTGGCCGCATTCTCGCCTTGTGTTCTCCCGCTACTGGTTACGCAGGCAGCTGTCGT
CAGCTCTCGGGGCCGCGTCATGTCGGCTAGCAGCTGTGGGCTCTGTGGTCTCGCGAGCTTTGTGGGGGTGCTCGGGATAG
GTGCCCTCTTCGTCCTGTTCGGCGCCGCTGTGTCGAGGCTGCAGGAGGTGCTAATACCAGTTATAGCGTCGGCTGTTATT
GCTGCTGGTTTCGGGGGGCTGCTTGGGGTCCCGGTTGAGCTGGAGGGGATCATATCGGCTAGGAGGGGCGGCCTCATAGG
CTTCTGTGCCGCTTATGGGTTCCTTGCTGTGCAGTGCAACCTTCCCCTCGTTGTGGGTGCACTTCTACTCATCGCTAGTG
CTGGGAGCACTGTGTCAGCGCTGCTTGTCGCATCAAGCTTCGCCCTCGGCGTTAGCGTGCCCCTAGCCCTAGCCCTCTAC
ACCGTATCCAGGCTGGGCGCGGGTGTTGTAGACAGGCTCCTCGCCAGGAGCAGCCTACTAAGCAGGATTGGTGGAGCAGT
CCTCCTAGCCTCGGGGCTCTACCTACTCATGTACAGCCTACAGCTGGTCTAG

Upstream 100 bases:

>100_bases
TTTTCTTGAAAGGTATAATTTTGTACTGGGGTGGCTGCTGTGTGCTTCGCCTGGCAAGGGGGCCTGGTTGCGGGCCGTAC
TGGGGTGTGGCTGAGGGGTC

Downstream 100 bases:

>100_bases
AGAGGTGATGTGTTGCCTTGGCGTTCTCGCTGTTTGGACTCCACTACACAGCGATACTGCCTGCAGCAGCGCTTGCACTG
GTAGCCTATAGCGCCATAGC

Product: cytochrome c biogenesis protein

Products: NA

Alternate protein names: Thioredoxin Domain-Containing Protein; Cytochrome C Biogenesis Protein

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MSGLRRRSMRLDLEGFQRRKRSGALLVVLVTISAVVVFSLLVYMEGDSKVYLKVSGNSIPNLAALEKLLEETEKPVAVMF
EAPSCPVCRKMYPYWARLEEASSQLPVEFYHIMYSGESDPAFRRYGVSETPTFIVFVDGKPVARHVGGFWGGNITEAMLS
WALSAAGLAVASNPERLASEGLQVFNSRCAVCHGHIEGIDTESLRVWLESRRAVAGDMLAERLVEALRSNRTLSELYGGY
NLLHEAVAGMRKYVQDLTSYEVDRATYLLEYISAMLLGREPPRLFNDTLEAMAVEPGPGEATVISVTASGSQQLVGLVGA
LAAFAAGFVAAFSPCVLPLLVTQAAVVSSRGRVMSASSCGLCGLASFVGVLGIGALFVLFGAAVSRLQEVLIPVIASAVI
AAGFGGLLGVPVELEGIISARRGGLIGFCAAYGFLAVQCNLPLVVGALLLIASAGSTVSALLVASSFALGVSVPLALALY
TVSRLGAGVVDRLLARSSLLSRIGGAVLLASGLYLLMYSLQLV

Sequences:

>Translated_523_residues
MSGLRRRSMRLDLEGFQRRKRSGALLVVLVTISAVVVFSLLVYMEGDSKVYLKVSGNSIPNLAALEKLLEETEKPVAVMF
EAPSCPVCRKMYPYWARLEEASSQLPVEFYHIMYSGESDPAFRRYGVSETPTFIVFVDGKPVARHVGGFWGGNITEAMLS
WALSAAGLAVASNPERLASEGLQVFNSRCAVCHGHIEGIDTESLRVWLESRRAVAGDMLAERLVEALRSNRTLSELYGGY
NLLHEAVAGMRKYVQDLTSYEVDRATYLLEYISAMLLGREPPRLFNDTLEAMAVEPGPGEATVISVTASGSQQLVGLVGA
LAAFAAGFVAAFSPCVLPLLVTQAAVVSSRGRVMSASSCGLCGLASFVGVLGIGALFVLFGAAVSRLQEVLIPVIASAVI
AAGFGGLLGVPVELEGIISARRGGLIGFCAAYGFLAVQCNLPLVVGALLLIASAGSTVSALLVASSFALGVSVPLALALY
TVSRLGAGVVDRLLARSSLLSRIGGAVLLASGLYLLMYSLQLV
>Mature_522_residues
SGLRRRSMRLDLEGFQRRKRSGALLVVLVTISAVVVFSLLVYMEGDSKVYLKVSGNSIPNLAALEKLLEETEKPVAVMFE
APSCPVCRKMYPYWARLEEASSQLPVEFYHIMYSGESDPAFRRYGVSETPTFIVFVDGKPVARHVGGFWGGNITEAMLSW
ALSAAGLAVASNPERLASEGLQVFNSRCAVCHGHIEGIDTESLRVWLESRRAVAGDMLAERLVEALRSNRTLSELYGGYN
LLHEAVAGMRKYVQDLTSYEVDRATYLLEYISAMLLGREPPRLFNDTLEAMAVEPGPGEATVISVTASGSQQLVGLVGAL
AAFAAGFVAAFSPCVLPLLVTQAAVVSSRGRVMSASSCGLCGLASFVGVLGIGALFVLFGAAVSRLQEVLIPVIASAVIA
AGFGGLLGVPVELEGIISARRGGLIGFCAAYGFLAVQCNLPLVVGALLLIASAGSTVSALLVASSFALGVSVPLALALYT
VSRLGAGVVDRLLARSSLLSRIGGAVLLASGLYLLMYSLQLV

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55312; Mature: 55181

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLRRRSMRLDLEGFQRRKRSGALLVVLVTISAVVVFSLLVYMEGDSKVYLKVSGNSIP
CCCCHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
NLAALEKLLEETEKPVAVMFEAPSCPVCRKMYPYWARLEEASSQLPVEFYHIMYSGESDP
CHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
AFRRYGVSETPTFIVFVDGKPVARHVGGFWGGNITEAMLSWALSAAGLAVASNPERLASE
HHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHH
GLQVFNSRCAVCHGHIEGIDTESLRVWLESRRAVAGDMLAERLVEALRSNRTLSELYGGY
HHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NLLHEAVAGMRKYVQDLTSYEVDRATYLLEYISAMLLGREPPRLFNDTLEAMAVEPGPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCC
ATVISVTASGSQQLVGLVGALAAFAAGFVAAFSPCVLPLLVTQAAVVSSRGRVMSASSCG
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
LCGLASFVGVLGIGALFVLFGAAVSRLQEVLIPVIASAVIAAGFGGLLGVPVELEGIISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEHHHHHHH
RRGGLIGFCAAYGFLAVQCNLPLVVGALLLIASAGSTVSALLVASSFALGVSVPLALALY
HCCCHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVSRLGAGVVDRLLARSSLLSRIGGAVLLASGLYLLMYSLQLV
HHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGLRRRSMRLDLEGFQRRKRSGALLVVLVTISAVVVFSLLVYMEGDSKVYLKVSGNSIP
CCCHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
NLAALEKLLEETEKPVAVMFEAPSCPVCRKMYPYWARLEEASSQLPVEFYHIMYSGESDP
CHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
AFRRYGVSETPTFIVFVDGKPVARHVGGFWGGNITEAMLSWALSAAGLAVASNPERLASE
HHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHH
GLQVFNSRCAVCHGHIEGIDTESLRVWLESRRAVAGDMLAERLVEALRSNRTLSELYGGY
HHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NLLHEAVAGMRKYVQDLTSYEVDRATYLLEYISAMLLGREPPRLFNDTLEAMAVEPGPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCC
ATVISVTASGSQQLVGLVGALAAFAAGFVAAFSPCVLPLLVTQAAVVSSRGRVMSASSCG
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
LCGLASFVGVLGIGALFVLFGAAVSRLQEVLIPVIASAVIAAGFGGLLGVPVELEGIISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEHHHHHHH
RRGGLIGFCAAYGFLAVQCNLPLVVGALLLIASAGSTVSALLVASSFALGVSVPLALALY
HCCCHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVSRLGAGVVDRLLARSSLLSRIGGAVLLASGLYLLMYSLQLV
HHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA