Click here to switch to the map view.

The map label for this gene is ubiA [H]

Identifier: 124028336

GI number: 124028336

Start: 1498037

End: 1498969

Strand: Direct

Name: ubiA [H]

Synonym: Hbut_1488

Alternate gene names: 124028336

Gene position: 1498037-1498969 (Clockwise)

Preceding gene: 124028326

Following gene: 124028345

Centisome position: 89.86

GC content: 60.66

Gene sequence:

>933_bases
GTGGGGTCTCAGGGTGCGCCAGCAGCCTGGGATCCAGGTAGGCTTGGCGGCAGAGCTGGTAGGCTTCGCGCTCTCGCCCG
TCTAATCCGTATCGAGCACACACTGTTCAGCCTACCGTTCGCCTATGCTGGCGCCCTCATAGCCTGCCCGGAACGCCTCG
ATGCTAGAACAGTTGTGCTCATAGCGCTCGCAGTGTTTGGTCTTAGGACGGCAGCTATGGCCTATAACAATATCGCGGAT
CTCGATATTGACCAGCTGAACCCACGTACGAGGCACAGGCCGCTGGTGATTGGGGTTGTCAGGATCCGCGACGCGTGGCT
CCTAGTTTTCGCTGGCTCCCTGCTATACTATGCCTCGGCTGCGCTGCTCAACCGCTACGCGCTGCTTCTCAGCCCGCTGC
CCTGGCTCCTAGCCATGAGCTACCCTCATGCCAAGAGGGTGCACTGGGTTCCACACATCCACCTGGGCATAGTCCTGGGC
CTCGTTGTGTTCGGCGGCGCCGTAGCTACAGCCGGCATGGAGGCCACTGGGCTAATAGATGTTCTCCGCGCTGTGCCATG
GCTGCTCGTGGCTGCTGTAACGCTATGGGTTGCAGGCTTCGACACATACTACGCAATAATGGATCTGGAGTTTGACCGCA
AAATGGGGCTGGGCAGTATACCTGCAAGGCTAGGCGTAAAGGGCGCATTCGCGGCGAGCAGGCTCATGCACTGCGCTACG
GCGATCCTCCTAGCCTGGAGCATCCACGCCTATGGGCTCGGCGTCATAGCAGCTGCCTCGGCCATCATTGCTATCGGCTT
GCTGGCGTACCAGCACCTGCTCATCGCCAGGAAGGGCCTCGGCGCGATACCCGAGGCCTTCAACACAAACCTGCTGCTAG
GCCTGGTCATAAGCCTCGGAATCGCGGCTGACGTGCTAGCCAGGCTGGCGTGA

Upstream 100 bases:

>100_bases
CGGGCCGGAGGGCTGGAGGCCTTCCAGGCTATGGCTTGTATTCTGGGCAAGGAGTAAGACCCGCGGGCCGTCTCGTGTGA
CATGTCTTGGGGGCCTGGCC

Downstream 100 bases:

>100_bases
AGGAGGAAGGGGAGGTGTTGTGGCGGGCCGGCCGGGATTTGAACCCGGGACCTACGGGTTAAAAGCCCGCCGCTCTGCCA
GGCTGAGCTACCGGCCCAGA

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MGSQGAPAAWDPGRLGGRAGRLRALARLIRIEHTLFSLPFAYAGALIACPERLDARTVVLIALAVFGLRTAAMAYNNIAD
LDIDQLNPRTRHRPLVIGVVRIRDAWLLVFAGSLLYYASAALLNRYALLLSPLPWLLAMSYPHAKRVHWVPHIHLGIVLG
LVVFGGAVATAGMEATGLIDVLRAVPWLLVAAVTLWVAGFDTYYAIMDLEFDRKMGLGSIPARLGVKGAFAASRLMHCAT
AILLAWSIHAYGLGVIAAASAIIAIGLLAYQHLLIARKGLGAIPEAFNTNLLLGLVISLGIAADVLARLA

Sequences:

>Translated_310_residues
MGSQGAPAAWDPGRLGGRAGRLRALARLIRIEHTLFSLPFAYAGALIACPERLDARTVVLIALAVFGLRTAAMAYNNIAD
LDIDQLNPRTRHRPLVIGVVRIRDAWLLVFAGSLLYYASAALLNRYALLLSPLPWLLAMSYPHAKRVHWVPHIHLGIVLG
LVVFGGAVATAGMEATGLIDVLRAVPWLLVAAVTLWVAGFDTYYAIMDLEFDRKMGLGSIPARLGVKGAFAASRLMHCAT
AILLAWSIHAYGLGVIAAASAIIAIGLLAYQHLLIARKGLGAIPEAFNTNLLLGLVISLGIAADVLARLA
>Mature_309_residues
GSQGAPAAWDPGRLGGRAGRLRALARLIRIEHTLFSLPFAYAGALIACPERLDARTVVLIALAVFGLRTAAMAYNNIADL
DIDQLNPRTRHRPLVIGVVRIRDAWLLVFAGSLLYYASAALLNRYALLLSPLPWLLAMSYPHAKRVHWVPHIHLGIVLGL
VVFGGAVATAGMEATGLIDVLRAVPWLLVAAVTLWVAGFDTYYAIMDLEFDRKMGLGSIPARLGVKGAFAASRLMHCATA
ILLAWSIHAYGLGVIAAASAIIAIGLLAYQHLLIARKGLGAIPEAFNTNLLLGLVISLGIAADVLARLA

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790473, Length=290, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 33086; Mature: 32955

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSQGAPAAWDPGRLGGRAGRLRALARLIRIEHTLFSLPFAYAGALIACPERLDARTVVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHH
IALAVFGLRTAAMAYNNIADLDIDQLNPRTRHRPLVIGVVRIRDAWLLVFAGSLLYYASA
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
ALLNRYALLLSPLPWLLAMSYPHAKRVHWVPHIHLGIVLGLVVFGGAVATAGMEATGLID
HHHHHHHHHHCCHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLRAVPWLLVAAVTLWVAGFDTYYAIMDLEFDRKMGLGSIPARLGVKGAFAASRLMHCAT
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCHHHCCCHHHHHHHHHHHHH
AILLAWSIHAYGLGVIAAASAIIAIGLLAYQHLLIARKGLGAIPEAFNTNLLLGLVISLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
IAADVLARLA
HHHHHHHHCC
>Mature Secondary Structure 
GSQGAPAAWDPGRLGGRAGRLRALARLIRIEHTLFSLPFAYAGALIACPERLDARTVVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHH
IALAVFGLRTAAMAYNNIADLDIDQLNPRTRHRPLVIGVVRIRDAWLLVFAGSLLYYASA
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
ALLNRYALLLSPLPWLLAMSYPHAKRVHWVPHIHLGIVLGLVVFGGAVATAGMEATGLID
HHHHHHHHHHCCHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLRAVPWLLVAAVTLWVAGFDTYYAIMDLEFDRKMGLGSIPARLGVKGAFAASRLMHCAT
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCHHHCCCHHHHHHHHHHHHH
AILLAWSIHAYGLGVIAAASAIIAIGLLAYQHLLIARKGLGAIPEAFNTNLLLGLVISLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
IAADVLARLA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA