Click here to switch to the map view.

The map label for this gene is 124028335

Identifier: 124028335

GI number: 124028335

Start: 1496105

End: 1496719

Strand: Reverse

Name: 124028335

Synonym: Hbut_1486

Alternate gene names: NA

Gene position: 1496719-1496105 (Counterclockwise)

Preceding gene: 124028337

Following gene: 124028334

Centisome position: 89.78

GC content: 46.83

Gene sequence:

>615_bases
ATGCTAGTTATCGGCCTTGTACTCGTCTACCTAGTCGGATGGTTGACCTATAAGGGCATGGATCCAGATGAGGCGACCAG
CTTATTCGTTGGTCTCACTGCAAGTGGCGGGGTGCTGGCTTCATATTATGTCTTGACTAGGTATCCGTACTCATCAAGGA
TATGGGCCGTTGTTTTTGGAGATCCACTGCTTTCCTCGAGAAGCGACGCGGTAATATCTATGATCGTCGCTATACTTTTC
ATGTTCTTCGCGTATACGACGACTAGAGAGATAGTATACATAGGAGCCGACATTGAGGATGCAAGGCTCTCCGGACTCAA
GGTCTGGCTCTACGATCTCGCATTATATACTAGCATAGGGATTGTAGTCATAGTCATGATCAATACAGTCGGCTTCATAT
TAGAGCACGTATTAATACTTATACCAGGCCTCATAGCGCACTATGCTTCAAAGGGTGTCTATAGGGCTTTAACACTGAGC
ATTCTAATAGCGTTATTCTCATTCCTCGCAGGACTCGCATTAGCAATTGGATTTGACCAGAGTTCCTCGGCGATGACGGG
GTGCTTACTCGTACTAGAGTTTGGAGTCGTGTATTTCGCGGGGTGGTACAGGTGA

Upstream 100 bases:

>100_bases
GCTAATGTACATGGCAGCAGCTTCACCTCACAGTGCATTCTTGGCCGCCGCCCTCTAAATACCATTATCAGTCTTTATAG
GCCTCCCGATGAGAGTATGG

Downstream 100 bases:

>100_bases
AGAGAAGATTTGGAATAAGTATTAATGAGTCTATTGCCAAAATGCTCGAAGTCCTATCCAACCAGACGGGAGTAAATAGA
AGTAGGTTAATTGAGGAAGC

Product: ABC transporter

Products: NA

Alternate protein names: ABC-Type Mn2+/Zn2+ Transport System Permease Component; ABC Transporter; ABC Transporter Permease Protein; ABC Transporter Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLVIGLVLVYLVGWLTYKGMDPDEATSLFVGLTASGGVLASYYVLTRYPYSSRIWAVVFGDPLLSSRSDAVISMIVAILF
MFFAYTTTREIVYIGADIEDARLSGLKVWLYDLALYTSIGIVVIVMINTVGFILEHVLILIPGLIAHYASKGVYRALTLS
ILIALFSFLAGLALAIGFDQSSSAMTGCLLVLEFGVVYFAGWYR

Sequences:

>Translated_204_residues
MLVIGLVLVYLVGWLTYKGMDPDEATSLFVGLTASGGVLASYYVLTRYPYSSRIWAVVFGDPLLSSRSDAVISMIVAILF
MFFAYTTTREIVYIGADIEDARLSGLKVWLYDLALYTSIGIVVIVMINTVGFILEHVLILIPGLIAHYASKGVYRALTLS
ILIALFSFLAGLALAIGFDQSSSAMTGCLLVLEFGVVYFAGWYR
>Mature_204_residues
MLVIGLVLVYLVGWLTYKGMDPDEATSLFVGLTASGGVLASYYVLTRYPYSSRIWAVVFGDPLLSSRSDAVISMIVAILF
MFFAYTTTREIVYIGADIEDARLSGLKVWLYDLALYTSIGIVVIVMINTVGFILEHVLILIPGLIAHYASKGVYRALTLS
ILIALFSFLAGLALAIGFDQSSSAMTGCLLVLEFGVVYFAGWYR

Specific function: Unknown

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22315; Mature: 22315

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIGLVLVYLVGWLTYKGMDPDEATSLFVGLTASGGVLASYYVLTRYPYSSRIWAVVFG
CHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEC
DPLLSSRSDAVISMIVAILFMFFAYTTTREIVYIGADIEDARLSGLKVWLYDLALYTSIG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
IVVIVMINTVGFILEHVLILIPGLIAHYASKGVYRALTLSILIALFSFLAGLALAIGFDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSSAMTGCLLVLEFGVVYFAGWYR
CCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLVIGLVLVYLVGWLTYKGMDPDEATSLFVGLTASGGVLASYYVLTRYPYSSRIWAVVFG
CHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEC
DPLLSSRSDAVISMIVAILFMFFAYTTTREIVYIGADIEDARLSGLKVWLYDLALYTSIG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
IVVIVMINTVGFILEHVLILIPGLIAHYASKGVYRALTLSILIALFSFLAGLALAIGFDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSSAMTGCLLVLEFGVVYFAGWYR
CCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA