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The map label for this gene is rplP0 [H]

Identifier: 124028329

GI number: 124028329

Start: 1489606

End: 1490061

Strand: Reverse

Name: rplP0 [H]

Synonym: Hbut_1480

Alternate gene names: 124028329

Gene position: 1490061-1489606 (Counterclockwise)

Preceding gene: 124028330

Following gene: 124028328

Centisome position: 89.38

GC content: 56.14

Gene sequence:

>456_bases
ATGTACGACGATGGAGTGATAATCCCGAGGGACCAGCTACTCTTCGACCTGAAGGAGGTGAAGAATGACTTCATAAACGC
CGCTAAGGAGGCCATAGGCCTAGCGGTCGAGATAGTCTACCCTGCAGTACCCGGAGCCGTCGAAGCAGCCCTGGCAAAGG
CGTTCCTAGAGGCTAAGGCAGTAGCTGGAGAGGCGGGCATCCTACTCCCAGGCCTAGAGGAGGACATAATCGCGTGGGCA
GTACAGGAGGAACTAGCAGTCATAGCAGCCCTAGGAGACAAAGCCAAAGAATTGGGCCTGGAGGCAGTAGCCGCGCCAGC
GCCAGCCAAGGAGGAGGAAAAGAAAAAAGAAGGAGAAGAGGAGAAGGAGGAAGAGAGAAGTAGACCTCAGCGAGGGTCTT
GGAGGACTATTCGGCCTCTAGCCAGCGCGGCACGCTCGGCCCGCTTATCTATTTAA

Upstream 100 bases:

>100_bases
ACCAAGGCCTACATCAGGGCGGGTTATAGGAGGATACGATTCATCCTTCCCATAGGATTCGCCTAAATGAGCTTTAGAGA
TAAGCCTCAAGATACTCGCA

Downstream 100 bases:

>100_bases
TTCCATTCCCAGTTTCTCGATCTTACCAGGTAGCGGTTAGTAGAGGTATTTTCCTTTAAGAAGGGCTTTCAATCTATATT
TCTCGATGAGCCTTCTCTGC

Product: ribosomal protein 10e

Products: NA

Alternate protein names: L10E [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MYDDGVIIPRDQLLFDLKEVKNDFINAAKEAIGLAVEIVYPAVPGAVEAALAKAFLEAKAVAGEAGILLPGLEEDIIAWA
VQEELAVIAALGDKAKELGLEAVAAPAPAKEEEKKKEGEEEKEEERSRPQRGSWRTIRPLASAARSARLSI

Sequences:

>Translated_151_residues
MYDDGVIIPRDQLLFDLKEVKNDFINAAKEAIGLAVEIVYPAVPGAVEAALAKAFLEAKAVAGEAGILLPGLEEDIIAWA
VQEELAVIAALGDKAKELGLEAVAAPAPAKEEEKKKEGEEEKEEERSRPQRGSWRTIRPLASAARSARLSI
>Mature_151_residues
MYDDGVIIPRDQLLFDLKEVKNDFINAAKEAIGLAVEIVYPAVPGAVEAALAKAFLEAKAVAGEAGILLPGLEEDIIAWA
VQEELAVIAALGDKAKELGLEAVAAPAPAKEEEKKKEGEEEKEEERSRPQRGSWRTIRPLASAARSARLSI

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10 [H]

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001790
- InterPro:   IPR013522
- InterPro:   IPR022909 [H]

Pfam domain/function: PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 16215; Mature: 16215

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDDGVIIPRDQLLFDLKEVKNDFINAAKEAIGLAVEIVYPAVPGAVEAALAKAFLEAKA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAGEAGILLPGLEEDIIAWAVQEELAVIAALGDKAKELGLEAVAAPAPAKEEEKKKEGEE
HCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHCCCH
EKEEERSRPQRGSWRTIRPLASAARSARLSI
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYDDGVIIPRDQLLFDLKEVKNDFINAAKEAIGLAVEIVYPAVPGAVEAALAKAFLEAKA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAGEAGILLPGLEEDIIAWAVQEELAVIAALGDKAKELGLEAVAAPAPAKEEEKKKEGEE
HCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHCCCH
EKEEERSRPQRGSWRTIRPLASAARSARLSI
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA