Click here to switch to the map view.

The map label for this gene is 124028250

Identifier: 124028250

GI number: 124028250

Start: 1401441

End: 1402664

Strand: Direct

Name: 124028250

Synonym: Hbut_1401

Alternate gene names: NA

Gene position: 1401441-1402664 (Clockwise)

Preceding gene: 124028249

Following gene: 124028252

Centisome position: 84.06

GC content: 57.84

Gene sequence:

>1224_bases
GTGGCGCCGGGGTGCCCCGTATCACTGCTAGCGGTTGTTATTGGAAGCGTTTTCCTGGCCAGTATCGGGTTTGGCTTGTC
TAGGCTGGCGCTTGCCAAGTATCTCCGCGACGATCTTGGCGCCTCGGCGCTAGTTGTTTCGAGCCTTACGAGCTGGTTTA
TGGGTGCCAGGGCGTTCTCCTCAATACTCTCCGGCATTGCTGCTGATACCTTGCCATCTGCGAGGAGGATGCTCATGATT
CTCCCACTGGGCCTCACAGCAGTTATCGTCTACACTATTCCGTCTCTAGAGTCTCCAATCGCCATATTGTTTCTCAACGC
GCTATGGGGGTTTCTGAGCGGCGCAGTCTGGCCAGTTGTACAGACAGCAGCAGCTATGCTAGCTGGGCCCTGGAGTTCCA
CGGTCATGTCGGTATACTTTGCCTCGGGGAGCCTTGGCACTACAGCTGGCCAGTATCTCTACGGTGTACTCACAGTCGAT
AACCCAGGAGCAGTTAGGCTATCCGCATTATTCTTCGCCTCCTCAGCAGCCATGCTAGCCTATGTCTCTCATGCAGCTCC
GGCAGCTGGCATCCGCGGGAGGAGAAGGAGCAGGAGCGGCCTGAAAGCCGTACTCGGGACTCTTAGGAGGGACAGGTTTG
CCTCGTGGATACTCCTCTCAGCCCTGGCTGCAGGCTACCTCTCCGGTCTCCTCCGAGAATTCCTCTACGTATACCTCGGC
GAGGTCTACGGCCTAGACCGCCAAGAGCTAGCATCAACCCTGGCGCTGGCGGACCTGGCAGCATTTGCTGTCGGGCTCGC
GGTAGGCCAGCTTGCCGACCGGCTCGGCGTAGCCCCCGTAATAGCAGCAGTACTCGCAACCGGGCTCGCTGGTAGCCTAG
CCCTAGGCCTCTCAACCAGCCTACCAGTAGCCATGATCGGGCTTGCTCTCGCGCTCACCGCTACTAGGAGCAGTCTACCA
CTAACGAGGAATGCTGCTGCGTTCAGCGCTGAGTACCGTGCAACACTCGTAGGCGCCTCCAACACGCTCTCAAACATAGG
CCACCTAGCCAGCCCCATAATCGCTGGAAAGCTCTACGACACGCTCTACGGCAGCACCATAGCTGGTATAAGAGGCGAAG
CAACACCATTCCTAACAGCCGCCATACTACTCGCACCAACACTAGCACTATACCCGGTATGCGTCAGGACGAAACAATAC
ACGCGTCCTGTAGACCGGGTATAG

Upstream 100 bases:

>100_bases
TGGAGAAAACCGGAAGCCGTAAAGTGGAGCCTAGGTGCTGGGGTTGCGTTGGCAGTATAGCGTGGTGGCAGCGGCGGGGC
AGCAGTGTTGGCCTCGCACC

Downstream 100 bases:

>100_bases
CAGAACAGCCTTTCTATCCTCGGCTCACAGTTGAAGCCCACAAGCATAACATGCCAGCTGCAAATCATATGGGCTACAAG
TGGCCTCTCCCGAGGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAPGCPVSLLAVVIGSVFLASIGFGLSRLALAKYLRDDLGASALVVSSLTSWFMGARAFSSILSGIAADTLPSARRMLMI
LPLGLTAVIVYTIPSLESPIAILFLNALWGFLSGAVWPVVQTAAAMLAGPWSSTVMSVYFASGSLGTTAGQYLYGVLTVD
NPGAVRLSALFFASSAAMLAYVSHAAPAAGIRGRRRSRSGLKAVLGTLRRDRFASWILLSALAAGYLSGLLREFLYVYLG
EVYGLDRQELASTLALADLAAFAVGLAVGQLADRLGVAPVIAAVLATGLAGSLALGLSTSLPVAMIGLALALTATRSSLP
LTRNAAAFSAEYRATLVGASNTLSNIGHLASPIIAGKLYDTLYGSTIAGIRGEATPFLTAAILLAPTLALYPVCVRTKQY
TRPVDRV

Sequences:

>Translated_407_residues
MAPGCPVSLLAVVIGSVFLASIGFGLSRLALAKYLRDDLGASALVVSSLTSWFMGARAFSSILSGIAADTLPSARRMLMI
LPLGLTAVIVYTIPSLESPIAILFLNALWGFLSGAVWPVVQTAAAMLAGPWSSTVMSVYFASGSLGTTAGQYLYGVLTVD
NPGAVRLSALFFASSAAMLAYVSHAAPAAGIRGRRRSRSGLKAVLGTLRRDRFASWILLSALAAGYLSGLLREFLYVYLG
EVYGLDRQELASTLALADLAAFAVGLAVGQLADRLGVAPVIAAVLATGLAGSLALGLSTSLPVAMIGLALALTATRSSLP
LTRNAAAFSAEYRATLVGASNTLSNIGHLASPIIAGKLYDTLYGSTIAGIRGEATPFLTAAILLAPTLALYPVCVRTKQY
TRPVDRV
>Mature_406_residues
APGCPVSLLAVVIGSVFLASIGFGLSRLALAKYLRDDLGASALVVSSLTSWFMGARAFSSILSGIAADTLPSARRMLMIL
PLGLTAVIVYTIPSLESPIAILFLNALWGFLSGAVWPVVQTAAAMLAGPWSSTVMSVYFASGSLGTTAGQYLYGVLTVDN
PGAVRLSALFFASSAAMLAYVSHAAPAAGIRGRRRSRSGLKAVLGTLRRDRFASWILLSALAAGYLSGLLREFLYVYLGE
VYGLDRQELASTLALADLAAFAVGLAVGQLADRLGVAPVIAAVLATGLAGSLALGLSTSLPVAMIGLALALTATRSSLPL
TRNAAAFSAEYRATLVGASNTLSNIGHLASPIIAGKLYDTLYGSTIAGIRGEATPFLTAAILLAPTLALYPVCVRTKQYT
RPVDRV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42078; Mature: 41947

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPGCPVSLLAVVIGSVFLASIGFGLSRLALAKYLRDDLGASALVVSSLTSWFMGARAFS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
SILSGIAADTLPSARRMLMILPLGLTAVIVYTIPSLESPIAILFLNALWGFLSGAVWPVV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
QTAAAMLAGPWSSTVMSVYFASGSLGTTAGQYLYGVLTVDNPGAVRLSALFFASSAAMLA
HHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHH
YVSHAAPAAGIRGRRRSRSGLKAVLGTLRRDRFASWILLSALAAGYLSGLLREFLYVYLG
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYGLDRQELASTLALADLAAFAVGLAVGQLADRLGVAPVIAAVLATGLAGSLALGLSTS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
LPVAMIGLALALTATRSSLPLTRNAAAFSAEYRATLVGASNTLSNIGHLASPIIAGKLYD
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHH
TLYGSTIAGIRGEATPFLTAAILLAPTLALYPVCVRTKQYTRPVDRV
HHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
APGCPVSLLAVVIGSVFLASIGFGLSRLALAKYLRDDLGASALVVSSLTSWFMGARAFS
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
SILSGIAADTLPSARRMLMILPLGLTAVIVYTIPSLESPIAILFLNALWGFLSGAVWPVV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
QTAAAMLAGPWSSTVMSVYFASGSLGTTAGQYLYGVLTVDNPGAVRLSALFFASSAAMLA
HHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHH
YVSHAAPAAGIRGRRRSRSGLKAVLGTLRRDRFASWILLSALAAGYLSGLLREFLYVYLG
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYGLDRQELASTLALADLAAFAVGLAVGQLADRLGVAPVIAAVLATGLAGSLALGLSTS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
LPVAMIGLALALTATRSSLPLTRNAAAFSAEYRATLVGASNTLSNIGHLASPIIAGKLYD
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHH
TLYGSTIAGIRGEATPFLTAAILLAPTLALYPVCVRTKQYTRPVDRV
HHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA