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The map label for this gene is napH [H]

Identifier: 124028231

GI number: 124028231

Start: 1377016

End: 1377945

Strand: Direct

Name: napH [H]

Synonym: Hbut_1381

Alternate gene names: 124028231

Gene position: 1377016-1377945 (Clockwise)

Preceding gene: 124028230

Following gene: 124028232

Centisome position: 82.6

GC content: 57.2

Gene sequence:

>930_bases
GTGAGGGCCAGGAGTTCGTTCGCGCATAAGCTGAAGCTGGCGATTCGTGGTGTACCACCACGCGGCAAGTACACTATTGC
GAGGAGAGCCCTGCAACTGGCCATCCTCACATTATTCTCCACGCAGCTCCTCGTGTCGGGAGCAATACTTATGGGTAGCC
TTGCTTCGAGCAGAATACTCCGCACAATCCCCCTAATGGATCCCTTTGCCTGGCTCGAGCAGACCGCAGCTGCACATGGC
CCCGCTCCAGAGTCGATAGTGGCGGTGTTGATTGTAGTCGCGATCTACAGTGTGCTGGGCAGGTTCTTCTGTGGCTGGGT
CTGTCCGATGGATCTCCTCTTTAGCCTCTTTGAGCGTAAGCTAGCTGGCCCGAGGGCGCCTCCACAGTCGAGGCCCCACA
TGGCCGGCAAGGTGGAAAAGATGATACCACTGGCAATGATGGCAGTCTATATAGTGCTATCGGTGCGGCTGGGGCAGCCA
TTCTTCACAACGTACTCTCCCGTGGCGGGCGCTACAAAGCTTGGATCCGCGATCGTGAAGATCTTGTTTAACATACCGGG
GGCTGCAATAGGCTCAATCATGGCTTGGGCCACCATAACGGGGTTCGCCCTAATAGTCAACATCGCAGCAGAACACGTGT
TTGGTGTCAAGAGGCTCTGGTGCCGCTACATCTGCCCAATAGGCAACCTTTACGGCTACGTAATGAACCGGTATAGCCCG
CTCGTGCTAAAGGTGCGGCATGCAGATCAGTGTCGTGGATGCATGCTATGCAGCATGGTGTGCCCAATGGGCATCGATGT
GGCCAAGTATGTTGGGGAGGGACGCGATGTGAGGGACTACCGCTGCTTCCACTGTGGCCGCTGCGCAGAGGTCTGCCCAT
GGGGAGTCCTAAGCCTGGGTTTTGCCCCGCCACGCGCAAGGAAGGCCTAG

Upstream 100 bases:

>100_bases
CGGTCTTGAGGAGGAGAAGATCCAGGCGGAGCTAGCGCCCGCGGAGAAGACGGGGAAAGGGAGCCCGGAAAGGAGCATGG
CGCAGTAGGAGTGAGCAGCC

Downstream 100 bases:

>100_bases
ATCATACAATCTATTTCTTCTTTCCAGGCATGTTTCGGCTAAATAGTAAATTAGCGTGAAGGGCTAGGATTAGAGCGCGG
GACTGTAAGAGGTGCATAGT

Product: polyferredoxin

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRARSSFAHKLKLAIRGVPPRGKYTIARRALQLAILTLFSTQLLVSGAILMGSLASSRILRTIPLMDPFAWLEQTAAAHG
PAPESIVAVLIVVAIYSVLGRFFCGWVCPMDLLFSLFERKLAGPRAPPQSRPHMAGKVEKMIPLAMMAVYIVLSVRLGQP
FFTTYSPVAGATKLGSAIVKILFNIPGAAIGSIMAWATITGFALIVNIAAEHVFGVKRLWCRYICPIGNLYGYVMNRYSP
LVLKVRHADQCRGCMLCSMVCPMGIDVAKYVGEGRDVRDYRCFHCGRCAEVCPWGVLSLGFAPPRARKA

Sequences:

>Translated_309_residues
MRARSSFAHKLKLAIRGVPPRGKYTIARRALQLAILTLFSTQLLVSGAILMGSLASSRILRTIPLMDPFAWLEQTAAAHG
PAPESIVAVLIVVAIYSVLGRFFCGWVCPMDLLFSLFERKLAGPRAPPQSRPHMAGKVEKMIPLAMMAVYIVLSVRLGQP
FFTTYSPVAGATKLGSAIVKILFNIPGAAIGSIMAWATITGFALIVNIAAEHVFGVKRLWCRYICPIGNLYGYVMNRYSP
LVLKVRHADQCRGCMLCSMVCPMGIDVAKYVGEGRDVRDYRCFHCGRCAEVCPWGVLSLGFAPPRARKA
>Mature_309_residues
MRARSSFAHKLKLAIRGVPPRGKYTIARRALQLAILTLFSTQLLVSGAILMGSLASSRILRTIPLMDPFAWLEQTAAAHG
PAPESIVAVLIVVAIYSVLGRFFCGWVCPMDLLFSLFERKLAGPRAPPQSRPHMAGKVEKMIPLAMMAVYIVLSVRLGQP
FFTTYSPVAGATKLGSAIVKILFNIPGAAIGSIMAWATITGFALIVNIAAEHVFGVKRLWCRYICPIGNLYGYVMNRYSP
LVLKVRHADQCRGCMLCSMVCPMGIDVAKYVGEGRDVRDYRCFHCGRCAEVCPWGVLSLGFAPPRARKA

Specific function: Involved in electron transfer [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788532, Length=306, Percent_Identity=26.1437908496732, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011886 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33805; Mature: 33805

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARSSFAHKLKLAIRGVPPRGKYTIARRALQLAILTLFSTQLLVSGAILMGSLASSRIL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTIPLMDPFAWLEQTAAAHGPAPESIVAVLIVVAIYSVLGRFFCGWVCPMDLLFSLFERK
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGPRAPPQSRPHMAGKVEKMIPLAMMAVYIVLSVRLGQPFFTTYSPVAGATKLGSAIVK
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ILFNIPGAAIGSIMAWATITGFALIVNIAAEHVFGVKRLWCRYICPIGNLYGYVMNRYSP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
LVLKVRHADQCRGCMLCSMVCPMGIDVAKYVGEGRDVRDYRCFHCGRCAEVCPWGVLSLG
EEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCHHHHHC
FAPPRARKA
CCCCCCCCC
>Mature Secondary Structure
MRARSSFAHKLKLAIRGVPPRGKYTIARRALQLAILTLFSTQLLVSGAILMGSLASSRIL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTIPLMDPFAWLEQTAAAHGPAPESIVAVLIVVAIYSVLGRFFCGWVCPMDLLFSLFERK
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGPRAPPQSRPHMAGKVEKMIPLAMMAVYIVLSVRLGQPFFTTYSPVAGATKLGSAIVK
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ILFNIPGAAIGSIMAWATITGFALIVNIAAEHVFGVKRLWCRYICPIGNLYGYVMNRYSP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
LVLKVRHADQCRGCMLCSMVCPMGIDVAKYVGEGRDVRDYRCFHCGRCAEVCPWGVLSLG
EEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCHHHHHC
FAPPRARKA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]