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The map label for this gene is hybD [C]

Identifier: 124028222

GI number: 124028222

Start: 1364563

End: 1365138

Strand: Direct

Name: hybD [C]

Synonym: Hbut_1372

Alternate gene names: 124028222

Gene position: 1364563-1365138 (Clockwise)

Preceding gene: 124028214

Following gene: 124028223

Centisome position: 81.85

GC content: 57.12

Gene sequence:

>576_bases
GTGAGGCTGCTAGTACTGGGTGTCGGCAATCCCCTCTTTGCCGACGACGGGCTGGGTTACTGTGTTGTTCGGGGTCTCGA
GGAGTGTAGTTCTAGGCCATCATGTGTAGAGTTTGAGGCTGTTCAAGCTCTCGAGCCAGGCCTAGTAGCGCTCTTCGAGG
GTAGGGACCATGTTGTGATCATTGATATTGTGGATCCGCGTATGCTTCCTCCAGCTGCTAAGCTCTTAGTGGTGGAGCTT
GACCCCAACAGGCTCAGTAGCTCCGAGATTACCGGAGCAATAGTTAGTACAAGCTCTCACGAGCTGAACCCGGCAAGCCT
CGCGGTCTTAGCGAGAGCCTCAGGGCTCTTCAACGGTAGGGTGACCGTACTCGGCGTGCCGGGATTCAATATCGAGCTGG
GAGGTAGGGTTTCCGGCGAGGCACTCCAGGCGCTCCCCGTTCTCGTTAGGGAGCTCAGCTCTAGGATCTCGAGGCTCTGT
GGCGAGGAGATAGTGGTGGACATGGAGTGCTTCTGGAGGATCGTTAGCAGAGAGTGTAGCGTTAGTCACGGTGGAGCTGG
TGCCAGCCCAGGGTAG

Upstream 100 bases:

>100_bases
AAGTTTGGCTTAACACCGGCCTCTCACTGCACTAGTAAGCGCTGAGCTGCAGGTCTTCGGGCTCTCTGGCTTGAGAGTAG
GATGTTCAGGGTGCTGTGGT

Downstream 100 bases:

>100_bases
AGCTAGACATAGCAGTCGAGGTTACAGCACGCGTCGTGGCCGAGGCTTACAAGTCCACGCTGGAGCTGGCGAGGGAAGCA
GCAGAGATAGTTGAGTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRLLVLGVGNPLFADDGLGYCVVRGLEECSSRPSCVEFEAVQALEPGLVALFEGRDHVVIIDIVDPRMLPPAAKLLVVEL
DPNRLSSSEITGAIVSTSSHELNPASLAVLARASGLFNGRVTVLGVPGFNIELGGRVSGEALQALPVLVRELSSRISRLC
GEEIVVDMECFWRIVSRECSVSHGGAGASPG

Sequences:

>Translated_191_residues
MRLLVLGVGNPLFADDGLGYCVVRGLEECSSRPSCVEFEAVQALEPGLVALFEGRDHVVIIDIVDPRMLPPAAKLLVVEL
DPNRLSSSEITGAIVSTSSHELNPASLAVLARASGLFNGRVTVLGVPGFNIELGGRVSGEALQALPVLVRELSSRISRLC
GEEIVVDMECFWRIVSRECSVSHGGAGASPG
>Mature_191_residues
MRLLVLGVGNPLFADDGLGYCVVRGLEECSSRPSCVEFEAVQALEPGLVALFEGRDHVVIIDIVDPRMLPPAAKLLVVEL
DPNRLSSSEITGAIVSTSSHELNPASLAVLARASGLFNGRVTVLGVPGFNIELGGRVSGEALQALPVLVRELSSRISRLC
GEEIVVDMECFWRIVSRECSVSHGGAGASPG

Specific function: Protease Involved In The C-Terminal Processing Of Hybc, The Large Subunit Of Hydrogenase 2. Specifically Cleaves Off A 15 Amino Acid Peptide From The C Terminus Of The Precursor Of Hybc. [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 20148; Mature: 20148

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVLGVGNPLFADDGLGYCVVRGLEECSSRPSCVEFEAVQALEPGLVALFEGRDHVVI
CEEEEEECCCCEECCCCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCEEEEEECCCCEEE
IDIVDPRMLPPAAKLLVVELDPNRLSSSEITGAIVSTSSHELNPASLAVLARASGLFNGR
EEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCE
VTVLGVPGFNIELGGRVSGEALQALPVLVRELSSRISRLCGEEIVVDMECFWRIVSRECS
EEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHCCC
VSHGGAGASPG
CCCCCCCCCCC
>Mature Secondary Structure
MRLLVLGVGNPLFADDGLGYCVVRGLEECSSRPSCVEFEAVQALEPGLVALFEGRDHVVI
CEEEEEECCCCEECCCCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCEEEEEECCCCEEE
IDIVDPRMLPPAAKLLVVELDPNRLSSSEITGAIVSTSSHELNPASLAVLARASGLFNGR
EEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCE
VTVLGVPGFNIELGGRVSGEALQALPVLVRELSSRISRLCGEEIVVDMECFWRIVSRECS
EEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHCCC
VSHGGAGASPG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA