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The map label for this gene is rpl34e

Identifier: 124028181

GI number: 124028181

Start: 1323049

End: 1323369

Strand: Direct

Name: rpl34e

Synonym: Hbut_1326

Alternate gene names: 124028181

Gene position: 1323049-1323369 (Clockwise)

Preceding gene: 124028180

Following gene: 124028182

Centisome position: 79.36

GC content: 61.37

Gene sequence:

>321_bases
ATGCCCAGGCCGCACCAGAGAACAAGGTCGCTCCGCCGCGTCTACGTTAGGACACCCGGTGGCGAGACAAAGATACACTA
CGAGAAGAGGAGGCCTGGGCCGGCGCGCTGCGCGATCTGTGGTAGGCCGCTAAACGGTGTGCCCAGGCTGAGGCCTGTAG
AGCTAAGGAAGCTGCCGAAGACGGCGAAGAGGCCTGAGCGCATGTATGGTGGTGTGCTCTGTGCTGAGTGCCTGGAGAAG
CTGCTGAAGAAGAGTATTCGCAGCCAGGTGCTAGCACAGCTAGAGCAGCTAAGACGGAGCGTGGCTGCTGGGCAGTCCTA
G

Upstream 100 bases:

>100_bases
TCCTTGTTGGCCTGCCGCTAGTCCAGGACGATCTTATAGCGGTGCTAATGTTTAAGAAAGCCCGGCTGTGGAGCCGGATA
AGAGCGGGGTGAAGCTGTAG

Downstream 100 bases:

>100_bases
CTTTCCACTGTTCTCCCCGCTGGTACTCCAGCCTTCTTTACCCCTAGCCCGTGTCGGGGCCTACTCTACACCTGGGTGGC
AGTCCTGCGTCTACAGCCGC

Product: 50S ribosomal protein L34e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPRPHQRTRSLRRVYVRTPGGETKIHYEKRRPGPARCAICGRPLNGVPRLRPVELRKLPKTAKRPERMYGGVLCAECLEK
LLKKSIRSQVLAQLEQLRRSVAAGQS

Sequences:

>Translated_106_residues
MPRPHQRTRSLRRVYVRTPGGETKIHYEKRRPGPARCAICGRPLNGVPRLRPVELRKLPKTAKRPERMYGGVLCAECLEK
LLKKSIRSQVLAQLEQLRRSVAAGQS
>Mature_105_residues
PRPHQRTRSLRRVYVRTPGGETKIHYEKRRPGPARCAICGRPLNGVPRLRPVELRKLPKTAKRPERMYGGVLCAECLEKL
LKKSIRSQVLAQLEQLRRSVAAGQS

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_HYPBU (A2BME5)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013501.1
- STRING:   A2BME5
- GeneID:   4781633
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1326
- eggNOG:   arNOG12906
- HOGENOM:   HBG553083
- OMA:   MPRPAYR
- PhylomeDB:   A2BME5
- ProtClustDB:   PRK04059
- BioCyc:   HBUT415426:HBUT_1326-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00349
- InterPro:   IPR008195
- InterPro:   IPR018065
- PANTHER:   PTHR10759
- PRINTS:   PR01250

Pfam domain/function: PF01199 Ribosomal_L34e

EC number: NA

Molecular weight: Translated: 12109; Mature: 11977

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: PS01145 RIBOSOMAL_L34E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPHQRTRSLRRVYVRTPGGETKIHYEKRRPGPARCAICGRPLNGVPRLRPVELRKLPK
CCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCC
TAKRPERMYGGVLCAECLEKLLKKSIRSQVLAQLEQLRRSVAAGQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRPHQRTRSLRRVYVRTPGGETKIHYEKRRPGPARCAICGRPLNGVPRLRPVELRKLPK
CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCC
TAKRPERMYGGVLCAECLEKLLKKSIRSQVLAQLEQLRRSVAAGQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA