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The map label for this gene is 124028096

Identifier: 124028096

GI number: 124028096

Start: 1242646

End: 1243632

Strand: Reverse

Name: 124028096

Synonym: Hbut_1239

Alternate gene names: NA

Gene position: 1243632-1242646 (Counterclockwise)

Preceding gene: 124028097

Following gene: 124028092

Centisome position: 74.6

GC content: 52.38

Gene sequence:

>987_bases
TTGGCTAGCGTGGCTGGCAAGCGTAGGCCGAGACTGCTGAGAAGTGGTAAAGTTGTAAACGCGTTTGATCCATGGGGAAG
TCCCCTCTGCACGTGTCCCACAAAGTACTCGCTAAACCCCTACACTGGCTGTAGTCACTTCTGCGTATACTGCTACGCTA
CAGCCTACATAGGTCAGAGGCCTAGCACTCCAAAGAAGAACTATAGGGAGAGACTCCTCCACGACATTACCAGTGTTATA
GACCCGAGATTCCACATAGATATTTCGACCAGCAGCGATCCCTATCCCCCAGAGGAGGAGTATTACAAACTGACACGCTG
GACCCTCGAACAGCTCCTACCACGTGGCTTCAAGGTCCTAATTATAACAAAAGGCTCACTCGTAGCCCGCGACACAGATC
TACTATCAAGAGGTAATGCAGCAGTAACAATGACTATCACGACACTCGACCGGGGACTTGCCGCTAAACTAGAACCGGGA
GCACCACCTCCACGAGAGAGAATCGAGGCACTAAGACGGCTCTCCCGTGCAGGTGTACCAGTGGGGCTCCGGCTCGACCC
GGTATTCCCCTACTTAACTGATGATGCAGAGAGTATAAGGAGGGTGTTAGAGGCTGCTTATGAGGCTGGTGTCCGGTTTG
TTGTAACCTCAACCTACAAGGCTAGACCTGATAACTTGAAGAGGCTTGTTGAGGCTTTCCCGGAGTACGAGAAACTATAC
AACAAACTGTACAGGGAGGAGGGTGTTTGGATGCATGGCTACTGGTATCTACGGCAAAGCTTGCGGTACGAGATAATGCT
TCGGGTTAAGCGTGAAGCCGAGCGTCTCGGCATGGAGTTTGCGACGTGTAGAGAGGGGTTCCCTTGGCTACACACCGCAA
GGACCTGCGATGGCTCCCACTTAATCCCACTGCGTATAGAGCCTCCCCGGAAACCACAGCAGAGAAGACTCGATGAGTAT
GCTAGCGGGCAGGAACGTATAGCTTGA

Upstream 100 bases:

>100_bases
TAGGCTCGGAAAGAGTGAGGTTGATCTCCGGGCAAGACACGCCAACATAGAGCTTTAGGGAGCTAAGGCACACACTACAT
GATTGTAGGGCTACTAGGTC

Downstream 100 bases:

>100_bases
GGAACTCTACCAGCGATGCTGCTAGTCTGCCAACCTCCATCTCCACAAGCTCTCGCGGAGGCCACTTACCACCCACACGT
ACATAACACTCCCTACACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MASVAGKRRPRLLRSGKVVNAFDPWGSPLCTCPTKYSLNPYTGCSHFCVYCYATAYIGQRPSTPKKNYRERLLHDITSVI
DPRFHIDISTSSDPYPPEEEYYKLTRWTLEQLLPRGFKVLIITKGSLVARDTDLLSRGNAAVTMTITTLDRGLAAKLEPG
APPPRERIEALRRLSRAGVPVGLRLDPVFPYLTDDAESIRRVLEAAYEAGVRFVVTSTYKARPDNLKRLVEAFPEYEKLY
NKLYREEGVWMHGYWYLRQSLRYEIMLRVKREAERLGMEFATCREGFPWLHTARTCDGSHLIPLRIEPPRKPQQRRLDEY
ASGQERIA

Sequences:

>Translated_328_residues
MASVAGKRRPRLLRSGKVVNAFDPWGSPLCTCPTKYSLNPYTGCSHFCVYCYATAYIGQRPSTPKKNYRERLLHDITSVI
DPRFHIDISTSSDPYPPEEEYYKLTRWTLEQLLPRGFKVLIITKGSLVARDTDLLSRGNAAVTMTITTLDRGLAAKLEPG
APPPRERIEALRRLSRAGVPVGLRLDPVFPYLTDDAESIRRVLEAAYEAGVRFVVTSTYKARPDNLKRLVEAFPEYEKLY
NKLYREEGVWMHGYWYLRQSLRYEIMLRVKREAERLGMEFATCREGFPWLHTARTCDGSHLIPLRIEPPRKPQQRRLDEY
ASGQERIA
>Mature_327_residues
ASVAGKRRPRLLRSGKVVNAFDPWGSPLCTCPTKYSLNPYTGCSHFCVYCYATAYIGQRPSTPKKNYRERLLHDITSVID
PRFHIDISTSSDPYPPEEEYYKLTRWTLEQLLPRGFKVLIITKGSLVARDTDLLSRGNAAVTMTITTLDRGLAAKLEPGA
PPPRERIEALRRLSRAGVPVGLRLDPVFPYLTDDAESIRRVLEAAYEAGVRFVVTSTYKARPDNLKRLVEAFPEYEKLYN
KLYREEGVWMHGYWYLRQSLRYEIMLRVKREAERLGMEFATCREGFPWLHTARTCDGSHLIPLRIEPPRKPQQRRLDEYA
SGQERIA

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37775; Mature: 37644

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVAGKRRPRLLRSGKVVNAFDPWGSPLCTCPTKYSLNPYTGCSHFCVYCYATAYIGQR
CCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSTPKKNYRERLLHDITSVIDPRFHIDISTSSDPYPPEEEYYKLTRWTLEQLLPRGFKVL
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
IITKGSLVARDTDLLSRGNAAVTMTITTLDRGLAAKLEPGAPPPRERIEALRRLSRAGVP
EEECCCEEECCHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
VGLRLDPVFPYLTDDAESIRRVLEAAYEAGVRFVVTSTYKARPDNLKRLVEAFPEYEKLY
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHH
NKLYREEGVWMHGYWYLRQSLRYEIMLRVKREAERLGMEFATCREGFPWLHTARTCDGSH
HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCCCCCC
LIPLRIEPPRKPQQRRLDEYASGQERIA
EEEEEECCCCCHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
ASVAGKRRPRLLRSGKVVNAFDPWGSPLCTCPTKYSLNPYTGCSHFCVYCYATAYIGQR
CCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSTPKKNYRERLLHDITSVIDPRFHIDISTSSDPYPPEEEYYKLTRWTLEQLLPRGFKVL
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
IITKGSLVARDTDLLSRGNAAVTMTITTLDRGLAAKLEPGAPPPRERIEALRRLSRAGVP
EEECCCEEECCHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
VGLRLDPVFPYLTDDAESIRRVLEAAYEAGVRFVVTSTYKARPDNLKRLVEAFPEYEKLY
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHH
NKLYREEGVWMHGYWYLRQSLRYEIMLRVKREAERLGMEFATCREGFPWLHTARTCDGSH
HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCCCCCC
LIPLRIEPPRKPQQRRLDEYASGQERIA
EEEEEECCCCCHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]