Click here to switch to the map view.

The map label for this gene is 124028041

Identifier: 124028041

GI number: 124028041

Start: 1192805

End: 1193233

Strand: Reverse

Name: 124028041

Synonym: Hbut_1182

Alternate gene names: NA

Gene position: 1193233-1192805 (Counterclockwise)

Preceding gene: 124028042

Following gene: 124028038

Centisome position: 71.57

GC content: 48.95

Gene sequence:

>429_bases
ATGGCTGTGCAACAAAACGTAAAGAAGGGTGGTAGGGAGGCGGGCGGAGACCTTATCGTCGGTAAGCATGTCTATGGGAA
CCTCTATGGTGTTGACGAGGAGAAGCTCTGGGATGAGGAGTTGTTAAAGGACATCGTAGTAGAAGCTGCTAGAGTTGCAA
ACATGAACCTAGTGGACATTAAGACGTGGAAGTTTACTGGGTTCCATGGCGGTGTCTCTGTCATCGCCCTGGTGCTTGAG
AGCCACATATCAATTCACACATGGCCCGACTATGGCTATGCTACTGTGGACGTGTACACTTGTGGTGCAAACAGTGATCC
CTGGAAAGCGTTCAACTACATAGTATTGAAGCTAAAGCCGCGCTACTACATAGTACACTACGCAGATAGGAGCAGCATAC
CAGGCTACACGGAGAGCGAAAAACGTTAA

Upstream 100 bases:

>100_bases
GGTTTATATGCTGGCTGCGTAAAGGTGAAAAACTCTCTTATGGCGGGGTTTCCTACACTCGGCGGCACAAATTTAACAAG
CGAAAAGGTAGTGATGAGCA

Downstream 100 bases:

>100_bases
AGAACCCTAAGCCTCAGAGACGGCCGCGGCTTCTTCATCGCGCTAAGGCTCGTTGAAACACGGCTCTTCATCGGCTAGCA
TCTTGGAACCATGGTAGGTA

Product: S-adenosylmethionine decarboxylase

Products: NA

Alternate protein names: ADC; ArgDC; Pyruvoyl-dependent arginine decarboxylase

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAVQQNVKKGGREAGGDLIVGKHVYGNLYGVDEEKLWDEELLKDIVVEAARVANMNLVDIKTWKFTGFHGGVSVIALVLE
SHISIHTWPDYGYATVDVYTCGANSDPWKAFNYIVLKLKPRYYIVHYADRSSIPGYTESEKR

Sequences:

>Translated_142_residues
MAVQQNVKKGGREAGGDLIVGKHVYGNLYGVDEEKLWDEELLKDIVVEAARVANMNLVDIKTWKFTGFHGGVSVIALVLE
SHISIHTWPDYGYATVDVYTCGANSDPWKAFNYIVLKLKPRYYIVHYADRSSIPGYTESEKR
>Mature_141_residues
AVQQNVKKGGREAGGDLIVGKHVYGNLYGVDEEKLWDEELLKDIVVEAARVANMNLVDIKTWKFTGFHGGVSVIALVLES
HISIHTWPDYGYATVDVYTCGANSDPWKAFNYIVLKLKPRYYIVHYADRSSIPGYTESEKR

Specific function: Specifically catalyzes the decarboxylation of L-arginine to agmatine. Has no S-adenosylmethionine decarboxylase (AdoMetDC) activity

COG id: COG1586

COG function: function code E; S-adenosylmethionine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARGDC_HYPBU (A2BM05)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013361.1
- ProteinModelPortal:   A2BM05
- SMR:   A2BM05
- STRING:   A2BM05
- GeneID:   4782734
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1182
- eggNOG:   arNOG11873
- HOGENOM:   HBG485559
- OMA:   KPNEMHI
- ProtClustDB:   CLSK964544
- BioCyc:   HBUT415426:HBUT_1182-MONOMER
- HAMAP:   MF_01298
- InterPro:   IPR003826
- InterPro:   IPR016067
- InterPro:   IPR017716
- Gene3D:   G3DSA:3.60.90.10
- TIGRFAMs:   TIGR03330

Pfam domain/function: PF02675 AdoMet_dc; SSF56276 S-AdenosylMet_decarbase_core

EC number: =4.1.1.19

Molecular weight: Translated: 16010; Mature: 15879

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: ACT_SITE 81-81 ACT_SITE 86-86 ACT_SITE 101-101

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQQNVKKGGREAGGDLIVGKHVYGNLYGVDEEKLWDEELLKDIVVEAARVANMNLVDI
CCCCCHHHCCCCCCCCCEEECCEECCCEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
KTWKFTGFHGGVSVIALVLESHISIHTWPDYGYATVDVYTCGANSDPWKAFNYIVLKLKP
EEEEEECCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEEECC
RYYIVHYADRSSIPGYTESEKR
CEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVQQNVKKGGREAGGDLIVGKHVYGNLYGVDEEKLWDEELLKDIVVEAARVANMNLVDI
CCCCHHHCCCCCCCCCEEECCEECCCEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
KTWKFTGFHGGVSVIALVLESHISIHTWPDYGYATVDVYTCGANSDPWKAFNYIVLKLKP
EEEEEECCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEEECC
RYYIVHYADRSSIPGYTESEKR
CEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA