| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is argS [H]
Identifier: 124028037
GI number: 124028037
Start: 1189085
End: 1191070
Strand: Reverse
Name: argS [H]
Synonym: Hbut_1178
Alternate gene names: 124028037
Gene position: 1191070-1189085 (Counterclockwise)
Preceding gene: 124028038
Following gene: 124028033
Centisome position: 71.44
GC content: 52.06
Gene sequence:
>1986_bases TTGACAAAGGCGTCGCTGGAGGTTTACGCTAATACTCCGCACAAGCTGCTTGCTAGAGCTATTAGAGAAGCACTCTCATC ATTCGACGTAGAGATTGATGGTAGGGAGGTAGAGTACATAGTATATGAGTCTCCCAACCCGGAGCTTGGAGACTATGGTG TACCACTGGCGAGGTTCGCGAAGAAATACCGTGTGGGTATCGGGGAGCTTGTAGAGAAAGTTAAGCAGGTACTCGCAGGA AGCACCATCGTAAAGGATGTATTATTTGTGCGTGGATACCTCAACATCAAACTGAATGCAGCGGAGGCTGCAAAGCTTAT CTTCAACGCTGCTAGGCTTGACGGGGAGAGCTACGGTATTATCAAGACCGATAAGCCTATGCGCATAGTCATAGAGCACA CGAGTGCTAATCCTGTACATCCACTACACATAGGGCATGCAAGAAATGCAAGCCTCGGAGATACTCTTGCGAGAATGTTG CGTGCAAGAGGCCACGTGGTGCAAACAAGGTTCTACATAAACGATCTCGGTCGCCAGGTAGCAGTAATGGCCTATGGCTA CATTGCTGGTGGCTTCGAGGAGCCCCCGCCCGGTATTAAGCCTGACCATTGGATAGGCGCGATATACGCTATAACGCATA CGTTGGCCGATATAGAGGAGGTTAAGAGGCAGGTAGAGGAGGCCAAGGCTAGTGGTGATGATGAACGGTACCGGGAGCTT CTACGGAAGCTAGACAGTCTTGTAGCAGATGCTGCACGGCTCCGCGAACAGTACCCCGATATCTTCGACAAGATCTCGGA GGCTGTTAGGGGGAGGGATGTTGGAGCAGAGATATCAAGGCTAATGAGGGTCTACGAGTACCGCGAGAACGAGGAGATAG TCCGTAAGGTTAGGAGAGTCGTCGAACTCTGCCTTGAGGGGTTCCGTGAAACCCTAAGTAAACTCGGCATAGAGTTTGAT GTGTGGGACTGGGAGAGCGACCTAGCCTGGAGCGGCATGGTCTCAAAGATACTCGAAGAGGCGCGTAAGAGCCCCTATGC AACAACCTACAAGGGAGCCTTCGCCCTAAACTTAAAACCAGTGCTTCGCGACCCGATAGTGCGTAGTGTATTGGGCCTCC CCGAGGACTATGATGTGCCTCCGCTTATACTGCAGCGCAGCGATGGCACAACACTATACACGACACGCGACATAGCATAC AGCATAAAGAAGTTCCGCGAATTTAATGCAGACAAAGTGTACAATGTGATAGCAGCCGAACAGAGGCTGGAACAGCTACA AGTAAGACTTGCACTCATAGCATTAGGGTATCGTCGCGAGGGTCTAAACACGATCCACTATGCCTACGAGATGGTAAACC TTCCAGGCCAGAAGATGAGTGGTAGGCGTGGCCGCTATGTAACCCTCGACGAGCTTGTTGAGCAAGCGATACGGGTGGCG CGGGAGGAGGTGGAGAAGAGGAGCCCTCACCTGTCAGCAGAGGAGAAGGAGCGGATAGCGCGCGCTGTCGGTGTTGCAGC TATGAGGTATGCACTAGTCTCGGTATCAGCACTGAAGCCCATGACGTTCGATCTGAGGGAGGCGCTAAACTTTGAGCGCA ACAGCGCACCATACATCATGTATGCTCATGCGCGCGCCTCGAGTATACTATCCAAGGCGGCGGAGCGCGGTATCAGTCTG GACTGGGAATCCATAGAATATGCTGCGGCAGAGGAAAACCAGCTAAGGCGCAGTCTCATCCTACTAGCGCTCAGCTACCC CTACATATTCGCCAAGGCAGCGGACGAGCTGAAGCCGGAGTTAATAGTAGCCTTCCTTAACAAGCTAGCAGATTTGTTCA ACAAGTGGTATGCCAGTGGCGATAGTGTGGTCAACGAGCCCGATAAAGGCAAGCAGATGTTCAAGCTAGCAATGGTATAC ACTGTAAAGAACATAGTGGCGAGCGGCCTCCGGCTGCTAGGCATAGAGCCCATAGAGAGAATGTAG
Upstream 100 bases:
>100_bases AAGATAGTTGAAGCCCTAAGAGAGTCCGAGGCTAGGAGCTAGACCATGAGATCCCCCTAGCCTTGTACCTTTACCACGTG TTGCGGGGTAGGCGGTTCCC
Downstream 100 bases:
>100_bases GGCCTAGCCCTCATGCTTTCCGCTTGCAGCCCGCTGCTGGGGCTTAGCAGTCAGAGCCTTGACGACTAGATCGGCCTTTT TCTCGGCATGCTTGAGCCCT
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MTKASLEVYANTPHKLLARAIREALSSFDVEIDGREVEYIVYESPNPELGDYGVPLARFAKKYRVGIGELVEKVKQVLAG STIVKDVLFVRGYLNIKLNAAEAAKLIFNAARLDGESYGIIKTDKPMRIVIEHTSANPVHPLHIGHARNASLGDTLARML RARGHVVQTRFYINDLGRQVAVMAYGYIAGGFEEPPPGIKPDHWIGAIYAITHTLADIEEVKRQVEEAKASGDDERYREL LRKLDSLVADAARLREQYPDIFDKISEAVRGRDVGAEISRLMRVYEYRENEEIVRKVRRVVELCLEGFRETLSKLGIEFD VWDWESDLAWSGMVSKILEEARKSPYATTYKGAFALNLKPVLRDPIVRSVLGLPEDYDVPPLILQRSDGTTLYTTRDIAY SIKKFREFNADKVYNVIAAEQRLEQLQVRLALIALGYRREGLNTIHYAYEMVNLPGQKMSGRRGRYVTLDELVEQAIRVA REEVEKRSPHLSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFERNSAPYIMYAHARASSILSKAAERGISL DWESIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPELIVAFLNKLADLFNKWYASGDSVVNEPDKGKQMFKLAMVY TVKNIVASGLRLLGIEPIERM
Sequences:
>Translated_661_residues MTKASLEVYANTPHKLLARAIREALSSFDVEIDGREVEYIVYESPNPELGDYGVPLARFAKKYRVGIGELVEKVKQVLAG STIVKDVLFVRGYLNIKLNAAEAAKLIFNAARLDGESYGIIKTDKPMRIVIEHTSANPVHPLHIGHARNASLGDTLARML RARGHVVQTRFYINDLGRQVAVMAYGYIAGGFEEPPPGIKPDHWIGAIYAITHTLADIEEVKRQVEEAKASGDDERYREL LRKLDSLVADAARLREQYPDIFDKISEAVRGRDVGAEISRLMRVYEYRENEEIVRKVRRVVELCLEGFRETLSKLGIEFD VWDWESDLAWSGMVSKILEEARKSPYATTYKGAFALNLKPVLRDPIVRSVLGLPEDYDVPPLILQRSDGTTLYTTRDIAY SIKKFREFNADKVYNVIAAEQRLEQLQVRLALIALGYRREGLNTIHYAYEMVNLPGQKMSGRRGRYVTLDELVEQAIRVA REEVEKRSPHLSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFERNSAPYIMYAHARASSILSKAAERGISL DWESIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPELIVAFLNKLADLFNKWYASGDSVVNEPDKGKQMFKLAMVY TVKNIVASGLRLLGIEPIERM >Mature_660_residues TKASLEVYANTPHKLLARAIREALSSFDVEIDGREVEYIVYESPNPELGDYGVPLARFAKKYRVGIGELVEKVKQVLAGS TIVKDVLFVRGYLNIKLNAAEAAKLIFNAARLDGESYGIIKTDKPMRIVIEHTSANPVHPLHIGHARNASLGDTLARMLR ARGHVVQTRFYINDLGRQVAVMAYGYIAGGFEEPPPGIKPDHWIGAIYAITHTLADIEEVKRQVEEAKASGDDERYRELL RKLDSLVADAARLREQYPDIFDKISEAVRGRDVGAEISRLMRVYEYRENEEIVRKVRRVVELCLEGFRETLSKLGIEFDV WDWESDLAWSGMVSKILEEARKSPYATTYKGAFALNLKPVLRDPIVRSVLGLPEDYDVPPLILQRSDGTTLYTTRDIAYS IKKFREFNADKVYNVIAAEQRLEQLQVRLALIALGYRREGLNTIHYAYEMVNLPGQKMSGRRGRYVTLDELVEQAIRVAR EEVEKRSPHLSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFERNSAPYIMYAHARASSILSKAAERGISLD WESIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPELIVAFLNKLADLFNKWYASGDSVVNEPDKGKQMFKLAMVYT VKNIVASGLRLLGIEPIERM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI197100773, Length=605, Percent_Identity=23.4710743801653, Blast_Score=106, Evalue=8e-23, Organism=Homo sapiens, GI15149476, Length=294, Percent_Identity=25.8503401360544, Blast_Score=87, Evalue=4e-17, Organism=Escherichia coli, GI1788184, Length=655, Percent_Identity=25.1908396946565, Blast_Score=142, Evalue=9e-35, Organism=Caenorhabditis elegans, GI71985061, Length=320, Percent_Identity=23.75, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17532153, Length=549, Percent_Identity=21.4936247723133, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320548, Length=576, Percent_Identity=24.8263888888889, Blast_Score=151, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6321883, Length=550, Percent_Identity=23.4545454545455, Blast_Score=137, Evalue=5e-33, Organism=Drosophila melanogaster, GI28571570, Length=547, Percent_Identity=20.4753199268739, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 74752; Mature: 74621
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKASLEVYANTPHKLLARAIREALSSFDVEIDGREVEYIVYESPNPELGDYGVPLARFA CCCCCEEEEECCHHHHHHHHHHHHHHHCCEEECCCEEEEEEEECCCCCCCCCCCCHHHHH KKYRVGIGELVEKVKQVLAGSTIVKDVLFVRGYLNIKLNAAEAAKLIFNAARLDGESYGI HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCCCE IKTDKPMRIVIEHTSANPVHPLHIGHARNASLGDTLARMLRARGHVVQTRFYINDLGRQV EECCCCEEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH AVMAYGYIAGGFEEPPPGIKPDHWIGAIYAITHTLADIEEVKRQVEEAKASGDDERYREL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LRKLDSLVADAARLREQYPDIFDKISEAVRGRDVGAEISRLMRVYEYRENEEIVRKVRRV HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH VELCLEGFRETLSKLGIEFDVWDWESDLAWSGMVSKILEEARKSPYATTYKGAFALNLKP HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEECCH VLRDPIVRSVLGLPEDYDVPPLILQRSDGTTLYTTRDIAYSIKKFREFNADKVYNVIAAE HHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHH QRLEQLQVRLALIALGYRREGLNTIHYAYEMVNLPGQKMSGRRGRYVTLDELVEQAIRVA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHH REEVEKRSPHLSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFERNSAPYIM HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE YAHARASSILSKAAERGISLDWESIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPE EEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LIVAFLNKLADLFNKWYASGDSVVNEPDKGKQMFKLAMVYTVKNIVASGLRLLGIEPIER HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHC M C >Mature Secondary Structure TKASLEVYANTPHKLLARAIREALSSFDVEIDGREVEYIVYESPNPELGDYGVPLARFA CCCCEEEEECCHHHHHHHHHHHHHHHCCEEECCCEEEEEEEECCCCCCCCCCCCHHHHH KKYRVGIGELVEKVKQVLAGSTIVKDVLFVRGYLNIKLNAAEAAKLIFNAARLDGESYGI HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCCCE IKTDKPMRIVIEHTSANPVHPLHIGHARNASLGDTLARMLRARGHVVQTRFYINDLGRQV EECCCCEEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH AVMAYGYIAGGFEEPPPGIKPDHWIGAIYAITHTLADIEEVKRQVEEAKASGDDERYREL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LRKLDSLVADAARLREQYPDIFDKISEAVRGRDVGAEISRLMRVYEYRENEEIVRKVRRV HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH VELCLEGFRETLSKLGIEFDVWDWESDLAWSGMVSKILEEARKSPYATTYKGAFALNLKP HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEECCH VLRDPIVRSVLGLPEDYDVPPLILQRSDGTTLYTTRDIAYSIKKFREFNADKVYNVIAAE HHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHH QRLEQLQVRLALIALGYRREGLNTIHYAYEMVNLPGQKMSGRRGRYVTLDELVEQAIRVA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHH REEVEKRSPHLSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFERNSAPYIM HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE YAHARASSILSKAAERGISLDWESIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPE EEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LIVAFLNKLADLFNKWYASGDSVVNEPDKGKQMFKLAMVYTVKNIVASGLRLLGIEPIER HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHC M C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]