| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124028010
Identifier: 124028010
GI number: 124028010
Start: 1158304
End: 1159155
Strand: Direct
Name: 124028010
Synonym: Hbut_1148
Alternate gene names: NA
Gene position: 1158304-1159155 (Clockwise)
Preceding gene: 124028009
Following gene: 124028011
Centisome position: 69.48
GC content: 50.59
Gene sequence:
>852_bases ATGTCCGAGCCTTTCCGTGTATCGGACTACATGTCTACGCCAGTTGTTGTTGTAACACCCCACAGCGATCTAGCCCATGT ACGTAGGCTTATGCTTCGCTACCGTATAGGTAGAGTTGTAGTTATTGATGAGGCCGAGAAGCCAGTTGGCATAGTCACAA TGAGCGACTTTGTCAGGCTTGTCGCAGAAAGGTTTTCAAGCAAACCCCTCGTAAACATTGCTGTAGCAGATATCATGACT AGGGATCCCGTAACGATACGTGATAATCGTTCACTAAGAGAGGCAGCTAGACTAATGATAAAACATGGTGTTAGCGGTCT ACCGGTCGTAGACGAGGATGGCAAGCTTGTAGGCATAATAACTAAGAGCGATATCGTCCGGGCGTTTGCCGAGAAGCTCC GCGGCAAGTTTAAGGTGCGCGACTACATGGAGGCGGATTTTCCAGATGCCACACCATGGCATAGCATCTACTACGTAGCC GACCTCCTCTACAATAGCCCTGTAAAGCGTGTACTCGTAGTTGAGGGCGAAAGACTCCTCGGAATAATAGCACCGAGCGA CATCGCATTTCTCAGCGAGCTGCCGATGCTGGCTAAGACTAGGATTAAGCCTATACGCCGTTTTGCTGAGCTGCCGAAGG GGCGTATGGGCCCCGTGTATAGCTATGTGATGCTCACCGCGCAGGATGTTATGACTCCAAGCCCCGTAACCATAGGGCCC GACGAAGATCTAGCTCTTGCTGCACAGCTAATGTTGAGACACGGATTTAGCTCGGTACCAGTGGTAGAAGACGAGACTCC CGTTGGGATAGTGGTCAAGCATAATATCCTCAAGGCGATAGCTGGAGTCTAG
Upstream 100 bases:
>100_bases TACGCGCTTGCAATAGCACCAAGTTAACCCAAGCTCGTATTTTCTCTCCGTATCCACATCCCGTACAAATCATACCCTCC AGCTAGATAGGCGATGTGTT
Downstream 100 bases:
>100_bases GCAGTCTAGACTACTAGGGAGCCCAGCAGCTGGGGTGATACAGACATGACTGTTACGGCTAAGGTACGCGATATAATGCT AACCGACTATCCGGCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSEPFRVSDYMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKPLVNIAVADIMT RDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRAFAEKLRGKFKVRDYMEADFPDATPWHSIYYVA DLLYNSPVKRVLVVEGERLLGIIAPSDIAFLSELPMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGP DEDLALAAQLMLRHGFSSVPVVEDETPVGIVVKHNILKAIAGV
Sequences:
>Translated_283_residues MSEPFRVSDYMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKPLVNIAVADIMT RDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRAFAEKLRGKFKVRDYMEADFPDATPWHSIYYVA DLLYNSPVKRVLVVEGERLLGIIAPSDIAFLSELPMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGP DEDLALAAQLMLRHGFSSVPVVEDETPVGIVVKHNILKAIAGV >Mature_282_residues SEPFRVSDYMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKPLVNIAVADIMTR DPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRAFAEKLRGKFKVRDYMEADFPDATPWHSIYYVAD LLYNSPVKRVLVVEGERLLGIIAPSDIAFLSELPMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGPD EDLALAAQLMLRHGFSSVPVVEDETPVGIVVKHNILKAIAGV
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 31456; Mature: 31325
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPFRVSDYMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRL CCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHHHH VAERFSSKPLVNIAVADIMTRDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGII HHHHHCCCCEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCEECCCCCEEEEE TKSDIVRAFAEKLRGKFKVRDYMEADFPDATPWHSIYYVADLLYNSPVKRVLVVEGERLL EHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEE GIIAPSDIAFLSELPMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGP EEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECC DEDLALAAQLMLRHGFSSVPVVEDETPVGIVVKHNILKAIAGV CCHHHHHHHHHHHCCCCCCCEECCCCCEEEEEHHHHHHHHHCC >Mature Secondary Structure SEPFRVSDYMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRL CCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHHHH VAERFSSKPLVNIAVADIMTRDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGII HHHHHCCCCEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCEECCCCCEEEEE TKSDIVRAFAEKLRGKFKVRDYMEADFPDATPWHSIYYVADLLYNSPVKRVLVVEGERLL EHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEE GIIAPSDIAFLSELPMLAKTRIKPIRRFAELPKGRMGPVYSYVMLTAQDVMTPSPVTIGP EEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECC DEDLALAAQLMLRHGFSSVPVVEDETPVGIVVKHNILKAIAGV CCHHHHHHHHHHHCCCCCCCEECCCCCEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]