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The map label for this gene is 124027973

Identifier: 124027973

GI number: 124027973

Start: 1120420

End: 1122438

Strand: Direct

Name: 124027973

Synonym: Hbut_1105

Alternate gene names: NA

Gene position: 1120420-1122438 (Clockwise)

Preceding gene: 124027972

Following gene: 124027974

Centisome position: 67.21

GC content: 52.11

Gene sequence:

>2019_bases
ATGATTAAAAGAAAGACATCCATGACTGCTTTCGATGTCGCCGCCGTAGTTCGGCAACTTAGTGGACTTCAAGGGAGCAG
GCTTGCAAACATCTACGCCTACAATGGCGGGTTTCTGCTCAGGTTCAAAGGCGCTGAAGATGCACGAGTTGTCGTTGTTC
CTGCAGTAAGACTCCATGCAACAAGGTATGAGCCTGCAGAGAGGGGGACTCCTCCCCCGCTTGTTATGGGCTTGAGGAAG
TATATTCGTGGAGCCCGACTTGAAAGCGTTGAACAGCACGGGTTTGACCGTATTGCAGTATTCAGGTTTTCCCGCGGCAA
TGGCTCCTATGTACTTGTTACCGAACTCCTTCCTCGTGGTGTTGTTGTTCTCGCTGACTCGTCCTGGAAAATTCTACACG
CTAGTGAACAGCGCGAAATGAGAGACCGTGTTATCAGGAGAGGTGTTGAGTACCAGTTTCCTCCGAGCAATACTATACAT
CCCTCCCAGCTTGCAGGAGAAACCGTTGAAGAAGCCTTATCGAGTGGTAGTGGAGAAGCAATTCGTATTTTAGCTCGTAG
ATTAGGTTATCCCGGCGAGGTTCTCGAAGAGGTTTTTGCAAGGCTCGACATACCTGTAGACGCTAGTGCAGACAGTCTTG
CTGGCCGCGGCGACGAGATAGCCGAGGCTATACGCAGACTATATGAGGAGTGCATGCAGCTGAAAGGCTACATAGTGTAT
GATAAGGGTGTTCCATTAACCGTAACTTGCTTTGAGCCCCGCGGGCTAGCTGCTCGTTACGGATTTGAGTACCGGGCATT
TAACGACCCTAGTACAGCTTACGACGAGTACTTCCTCACGGTTGCACGAGAGGCGGCTGGAGCTAGCACTGTTGCAGCTG
AAATTGAGGCAGAGAGAAAGAAGCTGCTCGCCTCTCTTGAGGCCGCCCGCCGCAACCTTGAGCACTTACGTAAGAAGCTT
AGAGAGCTTGAAGAACTTGCAGAGATAGTGTCAACAAACATAGCCGACGTATATGATGCTGTGGAATGCGCCCGAAAAAT
GAGGGAAACTGCTGGCTGGGAGCAGATACCTGGCAACTGTCCAGGCGTAGTCGACGTTGAACCGAACAAAGGTATCATTA
AGATATCAATTGTCGGGAACATAGTACCAATCGATATACGTATGGAGCCAGGCAGACTCGTCGTCGACTTATACAAGAGG
ATTGGCGAGGTGAGAGCAAAGATTGAGCGTGGCGAGAAAGCAGTGAAAGATATTGAAGCTAGACTCGCCGAGCTCGAGGA
GAAAGTTAGGCAGCGCTTGCTCCGTGCTCGTGCAATGGTACGGAGGAAGGAGTGGTACGAGAAATATCACTGGGTAATAA
CGAGCCATGGATACCTAGCCATCGGCGGCAGGGATGCCAGCCAAAACGAGTCCGTGGTTAAGAGGTACCTCAATGATAAG
AGGATATTCATGCACGCAGATATACATGGTGCACCAGCTGTAGTCTTCTTCGCTGAGGGCCAGACACCGCCAGAACAGGA
TCTGCGTGAAGCTGCAGCCATAGCTGCTGCCTACTCTAAGGCCTGGAAGGCTGGTATTGGTAGTGTGGACGTGTACTGGG
TTTGGGGGAGCCAGGTTTCGAAGGCTGCTCCTGCGGGCGAGTACCTTGCTAAGGGCGCATTCATGGTGTACGGCAAGAGG
AACTATATACGTAACGTTGAAGTCAAGATAGCTATCGGGATTGGCCTAGAGGACGAGTATAGCCCTGTAGTCATAGTAGG
CCCTGATAGCCTCGTGAGGAGGAGGAGCATCGTGTATGCCGTGCTAGCCCCAGGCGATGAGGACCCCTCAAAGCTCGCCA
AGAGGCTTCGGAGCCTCCTCGCGGGGAAGGCGGGAGAGTATAAGCCTATAATCGAAGCTGTAGGAGTTGAAGAGCTACGT
GAACGCATACCGGGTCGGGCGAGGGTCCTCTATGTCGGTAGGGGGAGCAGAGAAGAGCCGCCGAGACCTCTTCGAATACT
ACATGGAGAGGAGAGTTGA

Upstream 100 bases:

>100_bases
AATACATCCACTTGCTGCACCTACTACAGCCCTGTTTTAATCGTTGGCACACTGCCTTCTTCTTTGGGCTCTCCAACTCT
CAGTCTTGGGGGTAGGGTAG

Downstream 100 bases:

>100_bases
GCGGCTTAAGCTCTCAGCAGTGAGGATAATATCAGGCCTCGTGCTTGGCATTGCTGCAGCCCTAGCAGAGTCAACCACAA
TCGCATATGCGCTCTTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MIKRKTSMTAFDVAAVVRQLSGLQGSRLANIYAYNGGFLLRFKGAEDARVVVVPAVRLHATRYEPAERGTPPPLVMGLRK
YIRGARLESVEQHGFDRIAVFRFSRGNGSYVLVTELLPRGVVVLADSSWKILHASEQREMRDRVIRRGVEYQFPPSNTIH
PSQLAGETVEEALSSGSGEAIRILARRLGYPGEVLEEVFARLDIPVDASADSLAGRGDEIAEAIRRLYEECMQLKGYIVY
DKGVPLTVTCFEPRGLAARYGFEYRAFNDPSTAYDEYFLTVAREAAGASTVAAEIEAERKKLLASLEAARRNLEHLRKKL
RELEELAEIVSTNIADVYDAVECARKMRETAGWEQIPGNCPGVVDVEPNKGIIKISIVGNIVPIDIRMEPGRLVVDLYKR
IGEVRAKIERGEKAVKDIEARLAELEEKVRQRLLRARAMVRRKEWYEKYHWVITSHGYLAIGGRDASQNESVVKRYLNDK
RIFMHADIHGAPAVVFFAEGQTPPEQDLREAAAIAAAYSKAWKAGIGSVDVYWVWGSQVSKAAPAGEYLAKGAFMVYGKR
NYIRNVEVKIAIGIGLEDEYSPVVIVGPDSLVRRRSIVYAVLAPGDEDPSKLAKRLRSLLAGKAGEYKPIIEAVGVEELR
ERIPGRARVLYVGRGSREEPPRPLRILHGEES

Sequences:

>Translated_672_residues
MIKRKTSMTAFDVAAVVRQLSGLQGSRLANIYAYNGGFLLRFKGAEDARVVVVPAVRLHATRYEPAERGTPPPLVMGLRK
YIRGARLESVEQHGFDRIAVFRFSRGNGSYVLVTELLPRGVVVLADSSWKILHASEQREMRDRVIRRGVEYQFPPSNTIH
PSQLAGETVEEALSSGSGEAIRILARRLGYPGEVLEEVFARLDIPVDASADSLAGRGDEIAEAIRRLYEECMQLKGYIVY
DKGVPLTVTCFEPRGLAARYGFEYRAFNDPSTAYDEYFLTVAREAAGASTVAAEIEAERKKLLASLEAARRNLEHLRKKL
RELEELAEIVSTNIADVYDAVECARKMRETAGWEQIPGNCPGVVDVEPNKGIIKISIVGNIVPIDIRMEPGRLVVDLYKR
IGEVRAKIERGEKAVKDIEARLAELEEKVRQRLLRARAMVRRKEWYEKYHWVITSHGYLAIGGRDASQNESVVKRYLNDK
RIFMHADIHGAPAVVFFAEGQTPPEQDLREAAAIAAAYSKAWKAGIGSVDVYWVWGSQVSKAAPAGEYLAKGAFMVYGKR
NYIRNVEVKIAIGIGLEDEYSPVVIVGPDSLVRRRSIVYAVLAPGDEDPSKLAKRLRSLLAGKAGEYKPIIEAVGVEELR
ERIPGRARVLYVGRGSREEPPRPLRILHGEES
>Mature_672_residues
MIKRKTSMTAFDVAAVVRQLSGLQGSRLANIYAYNGGFLLRFKGAEDARVVVVPAVRLHATRYEPAERGTPPPLVMGLRK
YIRGARLESVEQHGFDRIAVFRFSRGNGSYVLVTELLPRGVVVLADSSWKILHASEQREMRDRVIRRGVEYQFPPSNTIH
PSQLAGETVEEALSSGSGEAIRILARRLGYPGEVLEEVFARLDIPVDASADSLAGRGDEIAEAIRRLYEECMQLKGYIVY
DKGVPLTVTCFEPRGLAARYGFEYRAFNDPSTAYDEYFLTVAREAAGASTVAAEIEAERKKLLASLEAARRNLEHLRKKL
RELEELAEIVSTNIADVYDAVECARKMRETAGWEQIPGNCPGVVDVEPNKGIIKISIVGNIVPIDIRMEPGRLVVDLYKR
IGEVRAKIERGEKAVKDIEARLAELEEKVRQRLLRARAMVRRKEWYEKYHWVITSHGYLAIGGRDASQNESVVKRYLNDK
RIFMHADIHGAPAVVFFAEGQTPPEQDLREAAAIAAAYSKAWKAGIGSVDVYWVWGSQVSKAAPAGEYLAKGAFMVYGKR
NYIRNVEVKIAIGIGLEDEYSPVVIVGPDSLVRRRSIVYAVLAPGDEDPSKLAKRLRSLLAGKAGEYKPIIEAVGVEELR
ERIPGRARVLYVGRGSREEPPRPLRILHGEES

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=161, Percent_Identity=40.9937888198758, Blast_Score=131, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32565397, Length=627, Percent_Identity=27.4322169059011, Blast_Score=214, Evalue=2e-55,
Organism=Drosophila melanogaster, GI281362530, Length=362, Percent_Identity=30.6629834254144, Blast_Score=146, Evalue=4e-35,
Organism=Drosophila melanogaster, GI281362528, Length=362, Percent_Identity=30.6629834254144, Blast_Score=146, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 74923; Mature: 74923

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRKTSMTAFDVAAVVRQLSGLQGSRLANIYAYNGGFLLRFKGAEDARVVVVPAVRLHA
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCEEEE
TRYEPAERGTPPPLVMGLRKYIRGARLESVEQHGFDRIAVFRFSRGNGSYVLVTELLPRG
CCCCCHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCC
VVVLADSSWKILHASEQREMRDRVIRRGVEYQFPPSNTIHPSQLAGETVEEALSSGSGEA
EEEEECCCCEEEECHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHH
IRILARRLGYPGEVLEEVFARLDIPVDASADSLAGRGDEIAEAIRRLYEECMQLKGYIVY
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCEEEE
DKGVPLTVTCFEPRGLAARYGFEYRAFNDPSTAYDEYFLTVAREAAGASTVAAEIEAERK
ECCCCEEEEEECCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KLLASLEAARRNLEHLRKKLRELEELAEIVSTNIADVYDAVECARKMRETAGWEQIPGNC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PGVVDVEPNKGIIKISIVGNIVPIDIRMEPGRLVVDLYKRIGEVRAKIERGEKAVKDIEA
CCEEEECCCCCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAELEEKVRQRLLRARAMVRRKEWYEKYHWVITSHGYLAIGGRDASQNESVVKRYLNDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCCCCHHHHHHHCCCC
RIFMHADIHGAPAVVFFAEGQTPPEQDLREAAAIAAAYSKAWKAGIGSVDVYWVWGSQVS
EEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHH
KAAPAGEYLAKGAFMVYGKRNYIRNVEVKIAIGIGLEDEYSPVVIVGPDSLVRRRSIVYA
CCCCCHHHHHCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEECCHHHHHHHEEEEE
VLAPGDEDPSKLAKRLRSLLAGKAGEYKPIIEAVGVEELRERIPGRARVLYVGRGSREEP
EECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCC
PRPLRILHGEES
CCCEEEECCCCC
>Mature Secondary Structure
MIKRKTSMTAFDVAAVVRQLSGLQGSRLANIYAYNGGFLLRFKGAEDARVVVVPAVRLHA
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCEEEE
TRYEPAERGTPPPLVMGLRKYIRGARLESVEQHGFDRIAVFRFSRGNGSYVLVTELLPRG
CCCCCHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCC
VVVLADSSWKILHASEQREMRDRVIRRGVEYQFPPSNTIHPSQLAGETVEEALSSGSGEA
EEEEECCCCEEEECHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHH
IRILARRLGYPGEVLEEVFARLDIPVDASADSLAGRGDEIAEAIRRLYEECMQLKGYIVY
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCEEEE
DKGVPLTVTCFEPRGLAARYGFEYRAFNDPSTAYDEYFLTVAREAAGASTVAAEIEAERK
ECCCCEEEEEECCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KLLASLEAARRNLEHLRKKLRELEELAEIVSTNIADVYDAVECARKMRETAGWEQIPGNC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PGVVDVEPNKGIIKISIVGNIVPIDIRMEPGRLVVDLYKRIGEVRAKIERGEKAVKDIEA
CCEEEECCCCCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAELEEKVRQRLLRARAMVRRKEWYEKYHWVITSHGYLAIGGRDASQNESVVKRYLNDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCCCCHHHHHHHCCCC
RIFMHADIHGAPAVVFFAEGQTPPEQDLREAAAIAAAYSKAWKAGIGSVDVYWVWGSQVS
EEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHH
KAAPAGEYLAKGAFMVYGKRNYIRNVEVKIAIGIGLEDEYSPVVIVGPDSLVRRRSIVYA
CCCCCHHHHHCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEECCHHHHHHHEEEEE
VLAPGDEDPSKLAKRLRSLLAGKAGEYKPIIEAVGVEELRERIPGRARVLYVGRGSREEP
EECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCC
PRPLRILHGEES
CCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]