Click here to switch to the map view.

The map label for this gene is 124027953

Identifier: 124027953

GI number: 124027953

Start: 1099448

End: 1099768

Strand: Reverse

Name: 124027953

Synonym: Hbut_1085

Alternate gene names: NA

Gene position: 1099768-1099448 (Counterclockwise)

Preceding gene: 124027956

Following gene: 124027951

Centisome position: 65.97

GC content: 51.09

Gene sequence:

>321_bases
ATGGGGTCTAGCGGTGAGCCAATGGTTTACATGAAAGTGATGGAGGTTCATGGCGAGAAGATAGTAGCCATCTGTGACGA
GGAACTTCTGGGCAAGAAGTTTGTCGAGGGGGAACTAGTGCTCCACATTAACGAGGAGTTTTACCGTGGCCAGCTAGTAC
CGCTAAGCTATGCCATGCAAAGAGCTTGGGAGGCTACGATTCTAAACCTCGTTGGCGAAAACACTGTTAATGCTGCCATA
AAAGAGGGCCTCATACACCCTGACGCGGTCATAAGGATTGCCGGGGTGCCACATGCACAGGCCGTGAGGATGCTCTACTA
A

Upstream 100 bases:

>100_bases
TCCTCCTCTACTGGCTACAATCCCTAAAAATGGGTGTGACACCCGTCCCTAATATTAGGAGACCCCATCCACCCCCTGTC
TGGAAGGGTGTGCAGCAGTC

Downstream 100 bases:

>100_bases
CTCCCTGCTCCCAGCGGTGCCTCCTAACAGTGCGGCCGTATAGTAGGTTTACTGGGTTGAACCCATACCACTCGCTGTAG
AGCAGTTTCCTCAGCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MGSSGEPMVYMKVMEVHGEKIVAICDEELLGKKFVEGELVLHINEEFYRGQLVPLSYAMQRAWEATILNLVGENTVNAAI
KEGLIHPDAVIRIAGVPHAQAVRMLY

Sequences:

>Translated_106_residues
MGSSGEPMVYMKVMEVHGEKIVAICDEELLGKKFVEGELVLHINEEFYRGQLVPLSYAMQRAWEATILNLVGENTVNAAI
KEGLIHPDAVIRIAGVPHAQAVRMLY
>Mature_105_residues
GSSGEPMVYMKVMEVHGEKIVAICDEELLGKKFVEGELVLHINEEFYRGQLVPLSYAMQRAWEATILNLVGENTVNAAIK
EGLIHPDAVIRIAGVPHAQAVRMLY

Specific function: Unknown

COG id: COG2412

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11779; Mature: 11648

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSGEPMVYMKVMEVHGEKIVAICDEELLGKKFVEGELVLHINEEFYRGQLVPLSYAMQ
CCCCCCCEEEEEEEHHCCCEEEEEECHHHHCCCCCCCEEEEEECCHHHCCCCCHHHHHHH
RAWEATILNLVGENTVNAAIKEGLIHPDAVIRIAGVPHAQAVRMLY
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHEECC
>Mature Secondary Structure 
GSSGEPMVYMKVMEVHGEKIVAICDEELLGKKFVEGELVLHINEEFYRGQLVPLSYAMQ
CCCCCCEEEEEEEHHCCCEEEEEECHHHHCCCCCCCEEEEEECCHHHCCCCCHHHHHHH
RAWEATILNLVGENTVNAAIKEGLIHPDAVIRIAGVPHAQAVRMLY
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA