| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027925
Identifier: 124027925
GI number: 124027925
Start: 1072704
End: 1073984
Strand: Reverse
Name: 124027925
Synonym: Hbut_1057
Alternate gene names: NA
Gene position: 1073984-1072704 (Counterclockwise)
Preceding gene: 124027927
Following gene: 124027924
Centisome position: 64.42
GC content: 55.97
Gene sequence:
>1281_bases GTGCCCGTCGAGGCGCTTGACCAGCTCAGGGCGGGCCTGTACCTACTCGGCATGCCGTACATCTACGAGGCCTACAAGCT GGTGGCTCGCTGGGCGCCAGAAGTGGCTGTTGTAGAGACAACTGCCGCCCCATCACAGGTGCCTGCTGAGGCTGGAGCCG GTGTGCCCGAGTACAGCGTGACAAACGTCCAGGTCTATGGTGTCGACGAGCCGGACATAGTTAAGACTAATGGTACGCAC ATATTCGTCGTTAATGGCGAGAGGCTGGTAGTCTTCCATGCCTACCCGCCGGAGGAGCTGAAGCCGGTGGCGGTTATTGA TGCTGGGAAGCTCATGGAGAAGCTATCGCCGCCCGCCGAGCTGATAGTTGTCGAAGGCAACGAGTCTAGAAGCCTTGGCA GGCTAGGGAAGATGTTTAGGATAAGCAGCCTCTTCATAGCTGATAGCAGTGTGGTCATTTTCGTAGACGAGTACTCAATG CTGCCACTCCTGGAGCCTAGAACATGGATTTTGAAGGTGGACCCGGGAACTGGTAGTATCGAGTGGGCCCTAGCGTTACC TGGCTCGTTCTATGATGCACGTCTTGCTGGTGGGGTTGTTGTAGCAGTTACTGGTGGCTACCAGCTTGTAAAACCAATGC TGGTCGTGTGGAGCTCCGAGACCTGCCGTGTGGACGTGGTTGTGCCGTTTCAGCCGCCGATACTTGTTGGCGCCTCTGGC GAGACCGTGGTCGCGGCCGTGAACCTGGAGACGGGAGCCTATGACACCCTGGTATTGCTCGGTGTCTCTCCCCGCGTAAT CTACATGACTGCTAACGGGACGCTATACCTCGCACTGCCGGGCATAGAGGATCTACACGCGATGATGGGCGAGCGTGCAA ACTTGGCCGAGGTCCTGGAGAAAGCTATGGAGTTAACGAGCTGGAATAAGACCACAATAGTGAGGATAGCGGTGGAGGAG GGACCAAAGCTAAGCATTGAGGCCCACAAAACGATAAGCGGTGTACTCGGGAAGCAGTGGCAGCTAGATGAGTACAACGA CTACCTCAGAATAGTGGTCACCACAAGAGGCGAGAAGGGTACAAGCGTGGACCTCTACGTGCTCAACGCAGAAACGCTCG AGGAAGTAGCGAGACTAGCCGGGATAGCTGTAGATGAGCAGGTACACGCAGTCCGATTCCTAGGCAGCCGCCTATACCTG GTAACCTTCCGGTTCATCGACCCGCTCTTTGTTATAGACCTCTTCGACCCAAGAAAATCCCAAATCGCTTGGCTACCGTG A
Upstream 100 bases:
>100_bases TCCAGCTACTACCGGTACTAGGAACCTCATAAACCCAAGCTGGTCCCACCGCTCTGCTGGCTCAATACTGGGTGTGGCTG GTGTAGGTTTAGGGTACCAG
Downstream 100 bases:
>100_bases GGGCCCAGGCTTCGACGAGTACCTACACCCGCTCAACGAGACACTACTAGTCGGCGTCGGCAGAGAGGACAATAGCCTCC GCATCTCGACCTACAGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MPVEALDQLRAGLYLLGMPYIYEAYKLVARWAPEVAVVETTAAPSQVPAEAGAGVPEYSVTNVQVYGVDEPDIVKTNGTH IFVVNGERLVVFHAYPPEELKPVAVIDAGKLMEKLSPPAELIVVEGNESRSLGRLGKMFRISSLFIADSSVVIFVDEYSM LPLLEPRTWILKVDPGTGSIEWALALPGSFYDARLAGGVVVAVTGGYQLVKPMLVVWSSETCRVDVVVPFQPPILVGASG ETVVAAVNLETGAYDTLVLLGVSPRVIYMTANGTLYLALPGIEDLHAMMGERANLAEVLEKAMELTSWNKTTIVRIAVEE GPKLSIEAHKTISGVLGKQWQLDEYNDYLRIVVTTRGEKGTSVDLYVLNAETLEEVARLAGIAVDEQVHAVRFLGSRLYL VTFRFIDPLFVIDLFDPRKSQIAWLP
Sequences:
>Translated_426_residues MPVEALDQLRAGLYLLGMPYIYEAYKLVARWAPEVAVVETTAAPSQVPAEAGAGVPEYSVTNVQVYGVDEPDIVKTNGTH IFVVNGERLVVFHAYPPEELKPVAVIDAGKLMEKLSPPAELIVVEGNESRSLGRLGKMFRISSLFIADSSVVIFVDEYSM LPLLEPRTWILKVDPGTGSIEWALALPGSFYDARLAGGVVVAVTGGYQLVKPMLVVWSSETCRVDVVVPFQPPILVGASG ETVVAAVNLETGAYDTLVLLGVSPRVIYMTANGTLYLALPGIEDLHAMMGERANLAEVLEKAMELTSWNKTTIVRIAVEE GPKLSIEAHKTISGVLGKQWQLDEYNDYLRIVVTTRGEKGTSVDLYVLNAETLEEVARLAGIAVDEQVHAVRFLGSRLYL VTFRFIDPLFVIDLFDPRKSQIAWLP >Mature_425_residues PVEALDQLRAGLYLLGMPYIYEAYKLVARWAPEVAVVETTAAPSQVPAEAGAGVPEYSVTNVQVYGVDEPDIVKTNGTHI FVVNGERLVVFHAYPPEELKPVAVIDAGKLMEKLSPPAELIVVEGNESRSLGRLGKMFRISSLFIADSSVVIFVDEYSML PLLEPRTWILKVDPGTGSIEWALALPGSFYDARLAGGVVVAVTGGYQLVKPMLVVWSSETCRVDVVVPFQPPILVGASGE TVVAAVNLETGAYDTLVLLGVSPRVIYMTANGTLYLALPGIEDLHAMMGERANLAEVLEKAMELTSWNKTTIVRIAVEEG PKLSIEAHKTISGVLGKQWQLDEYNDYLRIVVTTRGEKGTSVDLYVLNAETLEEVARLAGIAVDEQVHAVRFLGSRLYLV TFRFIDPLFVIDLFDPRKSQIAWLP
Specific function: Unknown
COG id: COG4880
COG function: function code R; Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019198 - InterPro: IPR011047 - InterPro: IPR014441 [H]
Pfam domain/function: PF09826 Beta_propel [H]
EC number: NA
Molecular weight: Translated: 46558; Mature: 46427
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVEALDQLRAGLYLLGMPYIYEAYKLVARWAPEVAVVETTAAPSQVPAEAGAGVPEYSV CCHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCEEE TNVQVYGVDEPDIVKTNGTHIFVVNGERLVVFHAYPPEELKPVAVIDAGKLMEKLSPPAE EEEEEEECCCCCEEEECCCEEEEEECCEEEEEECCCCHHCCCEEEEEHHHHHHHHCCCEE LIVVEGNESRSLGRLGKMFRISSLFIADSSVVIFVDEYSMLPLLEPRTWILKVDPGTGSI EEEEECCCCCCHHHHHHHHEEEEEEEECCEEEEEEECCCCCEEECCCEEEEEECCCCCCE EWALALPGSFYDARLAGGVVVAVTGGYQLVKPMLVVWSSETCRVDVVVPFQPPILVGASG EEEEECCCCCCCHHHCCCEEEEEECCHHHHCEEEEEECCCCEEEEEEECCCCCEEEECCC ETVVAAVNLETGAYDTLVLLGVSPRVIYMTANGTLYLALPGIEDLHAMMGERANLAEVLE CEEEEEEEECCCCCEEEEEEECCCEEEEEEECCEEEEEECCHHHHHHHHCCCCCHHHHHH KAMELTSWNKTTIVRIAVEEGPKLSIEAHKTISGVLGKQWQLDEYNDYLRIVVTTRGEKG HHHHHCCCCCEEEEEEEECCCCEEEEEECHHHHHHCCCCEECCCCCCEEEEEEEECCCCC TSVDLYVLNAETLEEVARLAGIAVDEQVHAVRFLGSRLYLVTFRFIDPLFVIDLFDPRKS CEEEEEEECHHHHHHHHHHHCCEECHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCC QIAWLP CEECCC >Mature Secondary Structure PVEALDQLRAGLYLLGMPYIYEAYKLVARWAPEVAVVETTAAPSQVPAEAGAGVPEYSV CHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCEEE TNVQVYGVDEPDIVKTNGTHIFVVNGERLVVFHAYPPEELKPVAVIDAGKLMEKLSPPAE EEEEEEECCCCCEEEECCCEEEEEECCEEEEEECCCCHHCCCEEEEEHHHHHHHHCCCEE LIVVEGNESRSLGRLGKMFRISSLFIADSSVVIFVDEYSMLPLLEPRTWILKVDPGTGSI EEEEECCCCCCHHHHHHHHEEEEEEEECCEEEEEEECCCCCEEECCCEEEEEECCCCCCE EWALALPGSFYDARLAGGVVVAVTGGYQLVKPMLVVWSSETCRVDVVVPFQPPILVGASG EEEEECCCCCCCHHHCCCEEEEEECCHHHHCEEEEEECCCCEEEEEEECCCCCEEEECCC ETVVAAVNLETGAYDTLVLLGVSPRVIYMTANGTLYLALPGIEDLHAMMGERANLAEVLE CEEEEEEEECCCCCEEEEEEECCCEEEEEEECCEEEEEECCHHHHHHHHCCCCCHHHHHH KAMELTSWNKTTIVRIAVEEGPKLSIEAHKTISGVLGKQWQLDEYNDYLRIVVTTRGEKG HHHHHCCCCCEEEEEEEECCCCEEEEEECHHHHHHCCCCEECCCCCCEEEEEEEECCCCC TSVDLYVLNAETLEEVARLAGIAVDEQVHAVRFLGSRLYLVTFRFIDPLFVIDLFDPRKS CEEEEEEECHHHHHHHHHHHCCEECHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCC QIAWLP CEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]