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The map label for this gene is sufB [C]

Identifier: 124027892

GI number: 124027892

Start: 1032051

End: 1033370

Strand: Direct

Name: sufB [C]

Synonym: Hbut_1022

Alternate gene names: 124027892

Gene position: 1032051-1033370 (Clockwise)

Preceding gene: 124027891

Following gene: 124027895

Centisome position: 61.9

GC content: 54.17

Gene sequence:

>1320_bases
GTGTCGGTCATGGATAAACCCCTAGCTGAGCTGAGCAGGGAGGACATTATAGAGTTCAGCCGTAAGCGCGGCGAGCCAGA
GTGGGTTCTAAGACTCCGCCTCAAAGCCTACGAGTACATACGCTCTACGAGCTACGACCCGTCAATAGATCCATACATGG
AGAAGGTTACCTACCGCCAGTTCCTTGAGGGCCTCGAGAAGCCACTAATTGTCGACGAGCAGCTGGCAAAGGCTGCTAGG
AGGCTGGGCATACGGCCCGACGAGTTAGAAATCATATACAGCGGATTCAGCGTAAACATAGACAACGTCGTTATCAAGAC
TGTTCTTAAAATGCTTGAGAAACGCGGGGTCATACTGACATCGATGGACGAAGCTGTAAAGAGGTACCCCGTTGTGAAGG
ACTACGCGTTCCGCGGTCTACACCCAACACTAAGCAAGAAGGTAGCCTACCACGTCATGCTATGGGCTGGCGGCATATTC
GTGTACGTGCCGGAGGGTGTTAGGCTACCCCAGCCCATTCAAGGCTTATTCATCATAGGGAAGGAGGGGCTTAGCCAGAC
AGAGCACACGCTAATAGTCCTCGAGGAGGGCGCAGAGCTACACTGGATTGAGGGCTGCACGGCACCGCTAAGACTTAGCT
ATGGCGTACACCTCGGAGGCCTGGAGGCCTTCGTAAAGGATAGGGCTAGGCTGTTCGTGGTTAGTATTAACAACTGGCCA
GGCGACGTACACCATACCCCCGCCAAGAGGGTGATTGTAGAGGGGTATAAGGCCTACGCCGAGCTTACAAGCGTATCTTT
GGCAGCCAAGACGGTGAACGTGGCGCCACGGATAGATCTCCGCGGCCAGGACAGCACCGCAGTCATACAGAACATAGGCC
TCTACCGGGGCAACCAGGTTGTACGCAGCTCTCCGCTCATAGTCTATGAGGCTCCGGGCACGAGGGGCCAGCTGCTAAAC
CGCACAGTCGTAAAGGATAGCGCGGACGAGGAGTTCCGTGGAAGACTCGAAGTGCGTAGAGGCGCTAAGGGCGCCACAGG
CTTCATGAGTTGCAACACCTTGATAATAGGTGATAAGGCTAGGAGTGCAGCGATACCGGCTATAGCGAGTGAGGAAAGGG
ACTCAGAGCTATCCCACGAGGCTAGCGTCGGAAGGATAAGCTATGAGAAGCTCTACTACCTACAGCTAATGGGATTTGAC
GAGGAGGAAGCAACCTGGCTGATAGTGAGCGGGTTCTTCGACCCAGTGATAAAGAAGCTGCCCTTCGACATACAGATAGA
GGTCAGAAAGATACTCGAGCTAGCAGTAAAAGGCCACTAG

Upstream 100 bases:

>100_bases
TACGTAATGCTCAGCGGCAGAATAGTCGCCGAAGGCGGTATCGAGCTGGTAAGGCGTATCGAGGAGAAAGGATACACACC
CTTCAGGGGTGAGTAGTGTC

Downstream 100 bases:

>100_bases
CATCAACCTCCCCCTTTTCCAAGCACAATACCGCGATACGATCCTCCCACCTCCTCTCACGTCGATAAGGAGCAGTAGTT
GAGGTAGCTGGAGATCATAG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSVMDKPLAELSREDIIEFSRKRGEPEWVLRLRLKAYEYIRSTSYDPSIDPYMEKVTYRQFLEGLEKPLIVDEQLAKAAR
RLGIRPDELEIIYSGFSVNIDNVVIKTVLKMLEKRGVILTSMDEAVKRYPVVKDYAFRGLHPTLSKKVAYHVMLWAGGIF
VYVPEGVRLPQPIQGLFIIGKEGLSQTEHTLIVLEEGAELHWIEGCTAPLRLSYGVHLGGLEAFVKDRARLFVVSINNWP
GDVHHTPAKRVIVEGYKAYAELTSVSLAAKTVNVAPRIDLRGQDSTAVIQNIGLYRGNQVVRSSPLIVYEAPGTRGQLLN
RTVVKDSADEEFRGRLEVRRGAKGATGFMSCNTLIIGDKARSAAIPAIASEERDSELSHEASVGRISYEKLYYLQLMGFD
EEEATWLIVSGFFDPVIKKLPFDIQIEVRKILELAVKGH

Sequences:

>Translated_439_residues
MSVMDKPLAELSREDIIEFSRKRGEPEWVLRLRLKAYEYIRSTSYDPSIDPYMEKVTYRQFLEGLEKPLIVDEQLAKAAR
RLGIRPDELEIIYSGFSVNIDNVVIKTVLKMLEKRGVILTSMDEAVKRYPVVKDYAFRGLHPTLSKKVAYHVMLWAGGIF
VYVPEGVRLPQPIQGLFIIGKEGLSQTEHTLIVLEEGAELHWIEGCTAPLRLSYGVHLGGLEAFVKDRARLFVVSINNWP
GDVHHTPAKRVIVEGYKAYAELTSVSLAAKTVNVAPRIDLRGQDSTAVIQNIGLYRGNQVVRSSPLIVYEAPGTRGQLLN
RTVVKDSADEEFRGRLEVRRGAKGATGFMSCNTLIIGDKARSAAIPAIASEERDSELSHEASVGRISYEKLYYLQLMGFD
EEEATWLIVSGFFDPVIKKLPFDIQIEVRKILELAVKGH
>Mature_438_residues
SVMDKPLAELSREDIIEFSRKRGEPEWVLRLRLKAYEYIRSTSYDPSIDPYMEKVTYRQFLEGLEKPLIVDEQLAKAARR
LGIRPDELEIIYSGFSVNIDNVVIKTVLKMLEKRGVILTSMDEAVKRYPVVKDYAFRGLHPTLSKKVAYHVMLWAGGIFV
YVPEGVRLPQPIQGLFIIGKEGLSQTEHTLIVLEEGAELHWIEGCTAPLRLSYGVHLGGLEAFVKDRARLFVVSINNWPG
DVHHTPAKRVIVEGYKAYAELTSVSLAAKTVNVAPRIDLRGQDSTAVIQNIGLYRGNQVVRSSPLIVYEAPGTRGQLLNR
TVVKDSADEEFRGRLEVRRGAKGATGFMSCNTLIIGDKARSAAIPAIASEERDSELSHEASVGRISYEKLYYLQLMGFDE
EEATWLIVSGFFDPVIKKLPFDIQIEVRKILELAVKGH

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=454, Percent_Identity=25.1101321585903, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1787971, Length=133, Percent_Identity=27.8195488721804, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 49374; Mature: 49243

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVMDKPLAELSREDIIEFSRKRGEPEWVLRLRLKAYEYIRSTSYDPSIDPYMEKVTYRQ
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
FLEGLEKPLIVDEQLAKAARRLGIRPDELEIIYSGFSVNIDNVVIKTVLKMLEKRGVILT
HHHHCCCCCEECHHHHHHHHHCCCCCCCEEEEEECCEECHHHHHHHHHHHHHHHCCCEEE
SMDEAVKRYPVVKDYAFRGLHPTLSKKVAYHVMLWAGGIFVYVPEGVRLPQPIQGLFIIG
CHHHHHHHCCCHHHHHHCCCCHHHHHHHHEEEEEEECCEEEECCCCCCCCCCCCCEEEEE
KEGLSQTEHTLIVLEEGAELHWIEGCTAPLRLSYGVHLGGLEAFVKDRARLFVVSINNWP
CCCCCCCCCEEEEEECCCCEEEECCCCCCEEEECCEEECHHHHHHCCCEEEEEEEECCCC
GDVHHTPAKRVIVEGYKAYAELTSVSLAAKTVNVAPRIDLRGQDSTAVIQNIGLYRGNQV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCHHHHHHCCCCCCCEE
VRSSPLIVYEAPGTRGQLLNRTVVKDSADEEFRGRLEVRRGAKGATGFMSCNTLIIGDKA
EECCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCEEEEECCC
RSAAIPAIASEERDSELSHEASVGRISYEKLYYLQLMGFDEEEATWLIVSGFFDPVIKKL
CCCCCCCCCCCCCCHHHHHHHCCCCEEHHEEEEEEEECCCCCCCEEEEEECHHHHHHHHC
PFDIQIEVRKILELAVKGH
CCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure 
SVMDKPLAELSREDIIEFSRKRGEPEWVLRLRLKAYEYIRSTSYDPSIDPYMEKVTYRQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
FLEGLEKPLIVDEQLAKAARRLGIRPDELEIIYSGFSVNIDNVVIKTVLKMLEKRGVILT
HHHHCCCCCEECHHHHHHHHHCCCCCCCEEEEEECCEECHHHHHHHHHHHHHHHCCCEEE
SMDEAVKRYPVVKDYAFRGLHPTLSKKVAYHVMLWAGGIFVYVPEGVRLPQPIQGLFIIG
CHHHHHHHCCCHHHHHHCCCCHHHHHHHHEEEEEEECCEEEECCCCCCCCCCCCCEEEEE
KEGLSQTEHTLIVLEEGAELHWIEGCTAPLRLSYGVHLGGLEAFVKDRARLFVVSINNWP
CCCCCCCCCEEEEEECCCCEEEECCCCCCEEEECCEEECHHHHHHCCCEEEEEEEECCCC
GDVHHTPAKRVIVEGYKAYAELTSVSLAAKTVNVAPRIDLRGQDSTAVIQNIGLYRGNQV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCHHHHHHCCCCCCCEE
VRSSPLIVYEAPGTRGQLLNRTVVKDSADEEFRGRLEVRRGAKGATGFMSCNTLIIGDKA
EECCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCEEEEECCC
RSAAIPAIASEERDSELSHEASVGRISYEKLYYLQLMGFDEEEATWLIVSGFFDPVIKKL
CCCCCCCCCCCCCCHHHHHHHCCCCEEHHEEEEEEEECCCCCCCEEEEEECHHHHHHHHC
PFDIQIEVRKILELAVKGH
CCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]