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The map label for this gene is ybbK [C]

Identifier: 124027881

GI number: 124027881

Start: 1024230

End: 1025063

Strand: Direct

Name: ybbK [C]

Synonym: Hbut_1010

Alternate gene names: 124027881

Gene position: 1024230-1025063 (Clockwise)

Preceding gene: 124027880

Following gene: 124027882

Centisome position: 61.44

GC content: 54.8

Gene sequence:

>834_bases
TTGGCTGGTATTGTTGTGTCTGCTCAGCAGCCGGGTGGACTTGAGCAGATTGGTGACTTGTTGGCGCTGGCTATTGGGCT
GCTAATAGTCATAATAATACTGGCGTACAGTATCCGTGTTGTACGGGAGTATGAGAGGGTTGTGGTGTTCCGTCTCGGCA
GGATTATCGGTGCTAAGGGACCCGGCATAGTCATAGTTATACCCATCATTGACCGTGTGGTCATGGTTGACCTGCGTATC
CATACGGTTGACGTGCCGAGGCAGAGGATCATAACTAGGGATAATGTTGAGGTTTCTGTGGATGCCGTTGTCTACTATCG
TGTGCAGGACCCGATTAAGGCTGTTACGACTGTGCGCAACTACCATCTCGCCGTCACAATGCTGGCGCAGACCGTGTTGA
GGGATATCATTGGCAAGAGCGAGCTGGACGACCTGCTGACCCGGAGGGATGAGATCAACAAGGAGCTGCAGAAAATCCTC
GACGAGTTGACAGATCCATGGGGTATCAAGGTTACAGCTGTAACGTTGAAGGAGGTTGTACTGCCCGAGGGTCTCGTAAG
GGCTATGGCTAGGCAGGCTGAGGCTGAGAGGTGGAGGAGGGCTAAGATAATCGAGGCTGAGGGCGAGAGGCAGGCAGCCA
AGATACTCGCTGAAGCAGCTGAGATCTATGAGCAGCACCCGGCCGCGCTGAGGCTGCGTGAGCTATCCACGCTCCTCGAG
GTGGCTAAGGAGAAGAACCTCATAGTCTTCTACCCGCTAACCGCTGGCTTCGAGGGTGTTGCAAGCCTTACAGCGCTTGC
CGAGGCTCGGAAGAGGAGTGGGGAGAGCCGGTAG

Upstream 100 bases:

>100_bases
GGGGCTGCGTTATATTCGTTGCTGGCTGGGGTTTGTCTCTGGGTTTTTGAGGGGCTCCCGGTGGGTTTACTGGCTGGAGT
AGTGGGGGTATAGGATTCCC

Downstream 100 bases:

>100_bases
CCTGTAACACTACCCTGGGAGCACTACACTCCGTTCCAATGTTTTTCCTCGCAGCCCATGCGTCGAGGGGATGCCCCTGC
TCGCAATACATGTTATCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAGIVVSAQQPGGLEQIGDLLALAIGLLIVIIILAYSIRVVREYERVVVFRLGRIIGAKGPGIVIVIPIIDRVVMVDLRI
HTVDVPRQRIITRDNVEVSVDAVVYYRVQDPIKAVTTVRNYHLAVTMLAQTVLRDIIGKSELDDLLTRRDEINKELQKIL
DELTDPWGIKVTAVTLKEVVLPEGLVRAMARQAEAERWRRAKIIEAEGERQAAKILAEAAEIYEQHPAALRLRELSTLLE
VAKEKNLIVFYPLTAGFEGVASLTALAEARKRSGESR

Sequences:

>Translated_277_residues
MAGIVVSAQQPGGLEQIGDLLALAIGLLIVIIILAYSIRVVREYERVVVFRLGRIIGAKGPGIVIVIPIIDRVVMVDLRI
HTVDVPRQRIITRDNVEVSVDAVVYYRVQDPIKAVTTVRNYHLAVTMLAQTVLRDIIGKSELDDLLTRRDEINKELQKIL
DELTDPWGIKVTAVTLKEVVLPEGLVRAMARQAEAERWRRAKIIEAEGERQAAKILAEAAEIYEQHPAALRLRELSTLLE
VAKEKNLIVFYPLTAGFEGVASLTALAEARKRSGESR
>Mature_276_residues
AGIVVSAQQPGGLEQIGDLLALAIGLLIVIIILAYSIRVVREYERVVVFRLGRIIGAKGPGIVIVIPIIDRVVMVDLRIH
TVDVPRQRIITRDNVEVSVDAVVYYRVQDPIKAVTTVRNYHLAVTMLAQTVLRDIIGKSELDDLLTRRDEINKELQKILD
ELTDPWGIKVTAVTLKEVVLPEGLVRAMARQAEAERWRRAKIIEAEGERQAAKILAEAAEIYEQHPAALRLRELSTLLEV
AKEKNLIVFYPLTAGFEGVASLTALAEARKRSGESR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=247, Percent_Identity=46.1538461538462, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI221316744, Length=249, Percent_Identity=44.9799196787149, Blast_Score=193, Evalue=1e-49,
Organism=Homo sapiens, GI21686995, Length=249, Percent_Identity=44.9799196787149, Blast_Score=193, Evalue=1e-49,
Organism=Homo sapiens, GI7657615, Length=241, Percent_Identity=37.344398340249, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=36.734693877551, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI20149563, Length=156, Percent_Identity=32.6923076923077, Blast_Score=102, Evalue=4e-22,
Organism=Escherichia coli, GI1786697, Length=201, Percent_Identity=37.3134328358209, Blast_Score=147, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI17569493, Length=238, Percent_Identity=45.7983193277311, Blast_Score=195, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI193209764, Length=238, Percent_Identity=45.7983193277311, Blast_Score=193, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI71987612, Length=236, Percent_Identity=45.7627118644068, Blast_Score=193, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI25153583, Length=236, Percent_Identity=45.7627118644068, Blast_Score=193, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI71987621, Length=242, Percent_Identity=46.2809917355372, Blast_Score=191, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17569497, Length=245, Percent_Identity=39.5918367346939, Blast_Score=190, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI193210507, Length=252, Percent_Identity=42.4603174603175, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17570161, Length=252, Percent_Identity=42.4603174603175, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17569499, Length=235, Percent_Identity=45.1063829787234, Blast_Score=188, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI71989948, Length=225, Percent_Identity=44.8888888888889, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI32566490, Length=241, Percent_Identity=47.3029045643153, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17570459, Length=236, Percent_Identity=41.9491525423729, Blast_Score=178, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=48.3695652173913, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI71989963, Length=122, Percent_Identity=47.5409836065574, Blast_Score=129, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI32564147, Length=180, Percent_Identity=37.7777777777778, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17542664, Length=179, Percent_Identity=32.4022346368715, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45556022, Length=241, Percent_Identity=47.3029045643153, Blast_Score=209, Evalue=1e-54,
Organism=Drosophila melanogaster, GI18860517, Length=253, Percent_Identity=44.2687747035573, Blast_Score=201, Evalue=3e-52,
Organism=Drosophila melanogaster, GI281365664, Length=251, Percent_Identity=48.207171314741, Blast_Score=198, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24657857, Length=251, Percent_Identity=48.207171314741, Blast_Score=198, Evalue=3e-51,
Organism=Drosophila melanogaster, GI62484448, Length=251, Percent_Identity=48.207171314741, Blast_Score=197, Evalue=5e-51,
Organism=Drosophila melanogaster, GI62484274, Length=251, Percent_Identity=48.207171314741, Blast_Score=196, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28573263, Length=237, Percent_Identity=38.3966244725738, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI21356845, Length=237, Percent_Identity=37.5527426160338, Blast_Score=174, Evalue=4e-44,
Organism=Drosophila melanogaster, GI281361633, Length=238, Percent_Identity=37.3949579831933, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281361631, Length=238, Percent_Identity=37.3949579831933, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281361635, Length=176, Percent_Identity=36.9318181818182, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI45550506, Length=184, Percent_Identity=36.4130434782609, Blast_Score=121, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 30834; Mature: 30703

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGIVVSAQQPGGLEQIGDLLALAIGLLIVIIILAYSIRVVREYERVVVFRLGRIIGAKG
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGIVIVIPIIDRVVMVDLRIHTVDVPRQRIITRDNVEVSVDAVVYYRVQDPIKAVTTVRN
CCEEEEHHHHHHHHHHHEEEEEECCCHHHCEECCCCEEEEEEEEEEEEHHHHHHHHHHHH
YHLAVTMLAQTVLRDIIGKSELDDLLTRRDEINKELQKILDELTDPWGIKVTAVTLKEVV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
LPEGLVRAMARQAEAERWRRAKIIEAEGERQAAKILAEAAEIYEQHPAALRLRELSTLLE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
VAKEKNLIVFYPLTAGFEGVASLTALAEARKRSGESR
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGIVVSAQQPGGLEQIGDLLALAIGLLIVIIILAYSIRVVREYERVVVFRLGRIIGAKG
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGIVIVIPIIDRVVMVDLRIHTVDVPRQRIITRDNVEVSVDAVVYYRVQDPIKAVTTVRN
CCEEEEHHHHHHHHHHHEEEEEECCCHHHCEECCCCEEEEEEEEEEEEHHHHHHHHHHHH
YHLAVTMLAQTVLRDIIGKSELDDLLTRRDEINKELQKILDELTDPWGIKVTAVTLKEVV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
LPEGLVRAMARQAEAERWRRAKIIEAEGERQAAKILAEAAEIYEQHPAALRLRELSTLLE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
VAKEKNLIVFYPLTAGFEGVASLTALAEARKRSGESR
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]