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The map label for this gene is fadF [H]

Identifier: 124027821

GI number: 124027821

Start: 955264

End: 956241

Strand: Direct

Name: fadF [H]

Synonym: Hbut_0948

Alternate gene names: 124027821

Gene position: 955264-956241 (Clockwise)

Preceding gene: 124027818

Following gene: 124027822

Centisome position: 57.3

GC content: 51.84

Gene sequence:

>978_bases
TTGGTTCTCGATACTAGGGTGATCCTCGAGCTTATAAGGGATAATATGAGAGTCCGCGGGCTGCCACTGCCTGTGCCGGA
GGATGTGCTGTCAAAATGGACTCACGGTCTAAGCATTCCCCGCGATGGCGAGTATTTGCTATTTACTGGCGGGCTATATC
AGCTCCTACCATACATCGAGGCTCTTGTGGGACAGCTTGAGAAGTTGGAGAAAGGCGTTATTGGAGGACTAGCGCTCAAG
CTTGCTAAGAGAGTTGCAAAGATAAGCGAGCTTGCCAAGTTTGTTGCTAAACCCGATAAGAGGATGGAAGAGTTTTCGAC
AAAGGTTCTTCAGAGTATTGTCGTGCTACTAGAGGCAGCTGGTGTAGACTTCTACTATAGGCCAGAGCTTGACGGGTATA
GCGGTGCATTACTCTACGACCTTGGGCTTGACAAAAGCTTCCAGCAGCACGCCTTAAAGCTGTATGAGAGACTGCGGGAG
GTGGGTGTACAGAAGATCGTTACGGTAGATCCCCACACCACGCATATGCTTCGCAACGTATACCCCAGATACGTTGGGGG
CTACTCGATAGAGGTCAAGTCATACCTCGAACTACTCTACGAGAACCTTGCCAAGCTAGAGTTCCAGAACGCCAGCGGTC
CAGAGGTAGTGATACACGATCCCTGCCTCTATGCCAGGTTCGAAGACATACTTGAGCCGCCACGCCGCCTACTAGAGGCT
GCAGGGTACCGCGTAGTAGAGCCTAGGAGGAGTGGCAGACTCACCTATTGCTGTGGCGGACCCATAGAGGCTGTAGCGCC
AAGGCTTTCAAAGAGGATTGCCGAGAATAGGGTGGAAGAGCTCTCAAGCTACTCGACTATTATTGTCACACTCTGCCCGA
TATGCTATGCGAATCTGAGCCGCGTAGCTCCGGACAATACGCGTGTAGAGGATATATCCATATTGCTTGCTGAGAGGCTG
GTGAGCCGTGCCGGTTGA

Upstream 100 bases:

>100_bases
GGCTAAGAGCCTGGATTAACGATGATGTAACTCCTCCAGGGTTTATTCAAAGGTTTTTATGCATCTAGGAGTCCACACTC
CTGTCGAGGTGCCTGGTTAC

Downstream 100 bases:

>100_bases
GAGGATTACCCTGCAGGAGGCTCTCCGCGAGATATACAGTGTGCTAGACGACGAGACGTTTCAGCGTGGCTTGAGGACTG
GTGTTAGAAATGCTGAGGGG

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MVLDTRVILELIRDNMRVRGLPLPVPEDVLSKWTHGLSIPRDGEYLLFTGGLYQLLPYIEALVGQLEKLEKGVIGGLALK
LAKRVAKISELAKFVAKPDKRMEEFSTKVLQSIVVLLEAAGVDFYYRPELDGYSGALLYDLGLDKSFQQHALKLYERLRE
VGVQKIVTVDPHTTHMLRNVYPRYVGGYSIEVKSYLELLYENLAKLEFQNASGPEVVIHDPCLYARFEDILEPPRRLLEA
AGYRVVEPRRSGRLTYCCGGPIEAVAPRLSKRIAENRVEELSSYSTIIVTLCPICYANLSRVAPDNTRVEDISILLAERL
VSRAG

Sequences:

>Translated_325_residues
MVLDTRVILELIRDNMRVRGLPLPVPEDVLSKWTHGLSIPRDGEYLLFTGGLYQLLPYIEALVGQLEKLEKGVIGGLALK
LAKRVAKISELAKFVAKPDKRMEEFSTKVLQSIVVLLEAAGVDFYYRPELDGYSGALLYDLGLDKSFQQHALKLYERLRE
VGVQKIVTVDPHTTHMLRNVYPRYVGGYSIEVKSYLELLYENLAKLEFQNASGPEVVIHDPCLYARFEDILEPPRRLLEA
AGYRVVEPRRSGRLTYCCGGPIEAVAPRLSKRIAENRVEELSSYSTIIVTLCPICYANLSRVAPDNTRVEDISILLAERL
VSRAG
>Mature_325_residues
MVLDTRVILELIRDNMRVRGLPLPVPEDVLSKWTHGLSIPRDGEYLLFTGGLYQLLPYIEALVGQLEKLEKGVIGGLALK
LAKRVAKISELAKFVAKPDKRMEEFSTKVLQSIVVLLEAAGVDFYYRPELDGYSGALLYDLGLDKSFQQHALKLYERLRE
VGVQKIVTVDPHTTHMLRNVYPRYVGGYSIEVKSYLELLYENLAKLEFQNASGPEVVIHDPCLYARFEDILEPPRRLLEA
AGYRVVEPRRSGRLTYCCGGPIEAVAPRLSKRIAENRVEELSSYSTIIVTLCPICYANLSRVAPDNTRVEDISILLAERL
VSRAG

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 36621; Mature: 36621

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDTRVILELIRDNMRVRGLPLPVPEDVLSKWTHGLSIPRDGEYLLFTGGLYQLLPYIE
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH
ALVGQLEKLEKGVIGGLALKLAKRVAKISELAKFVAKPDKRMEEFSTKVLQSIVVLLEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GVDFYYRPELDGYSGALLYDLGLDKSFQQHALKLYERLREVGVQKIVTVDPHTTHMLRNV
CCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHHH
YPRYVGGYSIEVKSYLELLYENLAKLEFQNASGPEVVIHDPCLYARFEDILEPPRRLLEA
HHHHHCCCEEEHHHHHHHHHHHHHHHEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
AGYRVVEPRRSGRLTYCCGGPIEAVAPRLSKRIAENRVEELSSYSTIIVTLCPICYANLS
CCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVAPDNTRVEDISILLAERLVSRAG
HCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLDTRVILELIRDNMRVRGLPLPVPEDVLSKWTHGLSIPRDGEYLLFTGGLYQLLPYIE
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH
ALVGQLEKLEKGVIGGLALKLAKRVAKISELAKFVAKPDKRMEEFSTKVLQSIVVLLEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GVDFYYRPELDGYSGALLYDLGLDKSFQQHALKLYERLREVGVQKIVTVDPHTTHMLRNV
CCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHHH
YPRYVGGYSIEVKSYLELLYENLAKLEFQNASGPEVVIHDPCLYARFEDILEPPRRLLEA
HHHHHCCCEEEHHHHHHHHHHHHHHHEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
AGYRVVEPRRSGRLTYCCGGPIEAVAPRLSKRIAENRVEELSSYSTIIVTLCPICYANLS
CCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVAPDNTRVEDISILLAERLVSRAG
HCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]