Click here to switch to the map view.

The map label for this gene is 124027764

Identifier: 124027764

GI number: 124027764

Start: 892277

End: 893557

Strand: Direct

Name: 124027764

Synonym: Hbut_0890

Alternate gene names: NA

Gene position: 892277-893557 (Clockwise)

Preceding gene: 124027763

Following gene: 124027766

Centisome position: 53.52

GC content: 49.18

Gene sequence:

>1281_bases
TTGAAGTACTTGATAAAGGCTAAGATAGAGGTTGAGGGGCTCGTAGATAGGCATGACATTATAGGTGCTATTTTCGGTCA
GACAGAGAACCTATTCGGCGAAGAGTTTGACCTCAGAAAGCTACAAGATAGAGGACGTATTGGCAGAGTGCAGGTAGATA
TAAAACACGAGGGTACACGCACGATTGGAGAGGTTGTTGTTCCCTCAAACCTTGATAGAGTTGAGACTGCACTAGTAGCA
GCAATGTTGGAGTCGGTCGAGAAGGTTGGTCCCTACAAGGCGCAGATAAGGGTCTACGACATAGTTGATGTTAGAGCGCA
GAAGATTAAACGTATCGTTGAGAGGGCAAAGGAGATCCTTAGGATATGGTCGCTGGAAAAGACTCCAGATCTGCGCGAGG
TTCTGCGTGAGATTAGCGAGGCTGTCAAGCGTGCAGAGGTCATAGAGTATGGGCCGGAAAGACTCCCGGCAGGTCCGGAT
GTGGATAAAAGCGATGAGATAATAATTGTCGAGGGGCGTGCTGACGTAATTAACTTGTTGAGGTATGGCTATAGAAACGT
TATCGCCCTTGAGGGTGCTAGGGGCAAGATACCAGAGACTATAATCAAGCTCGCTAAGACGAAGAAAGCCATAGCATTCG
TCGACGGCGACCATGGTGGCGACTTGATTCTCTGGGAGCTGTTAAAGGTTGCAGACATAGACTATGTTGCTAAGGCTCCG
CCGGGTAAAGAGGTTGAGGAGCTAACGGGCAAGGAGATTGCTAGGGCTCTCAGAAACCTCATACCAGCCAGGGAGTATCT
GCAGATCCTTGAGAGAAAGTTCAAACCAAAGCCAGCTGTAGAGGAGAGACCTCAGCCCCCGCAGCCACAGCCGCCAGCTG
TGCAGCCAGTACAGCCTACTCTGCAGCCGACAGTAACTACTGTCGAGGTGGTGCGTGAGGCTAAGCCTGAGAAGCCTACG
GTGCAAGTTGAGGTTGAGACCTTTGAGATACCACCTAGCGTTATAGAGGAGGTTAAGAAACTGAGTGGAACGCTTGAAGC
AGTACTATATGATAGCAAGTGGAATCCTATAGAGAGAGTGTCAGTGCGTGACGTCTACAACGTACTAGAGAAGATGGAGC
CGGGTAAGGTCTATGCTGTAGCCTATGATGGAATTGTTACACAGCGTATGCTGGATATTGCTGCGGAGAAGCAAGTGAGG
CTTCTCATAGCTAACAGGATAGGCAATATTGAGAAGAGGCCGCCCAAGGTTGGGATACTAACATTTAGCGACCTAACATG
A

Upstream 100 bases:

>100_bases
TTAGGCTGGGCTGTGCAGTACTGGAGGCAGATATGCTGGCTAGCTATACTCAACAGTCTTTGACTGGGAAGCGTAAGGTG
CTGTAGGGAAGGTGACAGCG

Downstream 100 bases:

>100_bases
TGCCATTATGGTACGTATATGTTCGGAGCTATGAGGGCTAAGGTAAAAGCTGAGACGAGAACTGTGACTGTCATGCCTAG
TTTTTCACCTAGAACCCTTA

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKYLIKAKIEVEGLVDRHDIIGAIFGQTENLFGEEFDLRKLQDRGRIGRVQVDIKHEGTRTIGEVVVPSNLDRVETALVA
AMLESVEKVGPYKAQIRVYDIVDVRAQKIKRIVERAKEILRIWSLEKTPDLREVLREISEAVKRAEVIEYGPERLPAGPD
VDKSDEIIIVEGRADVINLLRYGYRNVIALEGARGKIPETIIKLAKTKKAIAFVDGDHGGDLILWELLKVADIDYVAKAP
PGKEVEELTGKEIARALRNLIPAREYLQILERKFKPKPAVEERPQPPQPQPPAVQPVQPTLQPTVTTVEVVREAKPEKPT
VQVEVETFEIPPSVIEEVKKLSGTLEAVLYDSKWNPIERVSVRDVYNVLEKMEPGKVYAVAYDGIVTQRMLDIAAEKQVR
LLIANRIGNIEKRPPKVGILTFSDLT

Sequences:

>Translated_426_residues
MKYLIKAKIEVEGLVDRHDIIGAIFGQTENLFGEEFDLRKLQDRGRIGRVQVDIKHEGTRTIGEVVVPSNLDRVETALVA
AMLESVEKVGPYKAQIRVYDIVDVRAQKIKRIVERAKEILRIWSLEKTPDLREVLREISEAVKRAEVIEYGPERLPAGPD
VDKSDEIIIVEGRADVINLLRYGYRNVIALEGARGKIPETIIKLAKTKKAIAFVDGDHGGDLILWELLKVADIDYVAKAP
PGKEVEELTGKEIARALRNLIPAREYLQILERKFKPKPAVEERPQPPQPQPPAVQPVQPTLQPTVTTVEVVREAKPEKPT
VQVEVETFEIPPSVIEEVKKLSGTLEAVLYDSKWNPIERVSVRDVYNVLEKMEPGKVYAVAYDGIVTQRMLDIAAEKQVR
LLIANRIGNIEKRPPKVGILTFSDLT
>Mature_426_residues
MKYLIKAKIEVEGLVDRHDIIGAIFGQTENLFGEEFDLRKLQDRGRIGRVQVDIKHEGTRTIGEVVVPSNLDRVETALVA
AMLESVEKVGPYKAQIRVYDIVDVRAQKIKRIVERAKEILRIWSLEKTPDLREVLREISEAVKRAEVIEYGPERLPAGPD
VDKSDEIIIVEGRADVINLLRYGYRNVIALEGARGKIPETIIKLAKTKKAIAFVDGDHGGDLILWELLKVADIDYVAKAP
PGKEVEELTGKEIARALRNLIPAREYLQILERKFKPKPAVEERPQPPQPQPPAVQPVQPTLQPTVTTVEVVREAKPEKPT
VQVEVETFEIPPSVIEEVKKLSGTLEAVLYDSKWNPIERVSVRDVYNVLEKMEPGKVYAVAYDGIVTQRMLDIAAEKQVR
LLIANRIGNIEKRPPKVGILTFSDLT

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y890_HYPBU (A2BL78)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013084.1
- ProteinModelPortal:   A2BL78
- STRING:   A2BL78
- GeneID:   4782239
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0890
- eggNOG:   arNOG04629
- HOGENOM:   HBG541216
- OMA:   GYRNVIA
- ProtClustDB:   PRK04031
- BioCyc:   HBUT415426:HBUT_0890-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 47974; Mature: 47974

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLIKAKIEVEGLVDRHDIIGAIFGQTENLFGEEFDLRKLQDRGRIGRVQVDIKHEGTR
CCEEEEEEEEEECCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCC
TIGEVVVPSNLDRVETALVAAMLESVEKVGPYKAQIRVYDIVDVRAQKIKRIVERAKEIL
CHHCEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
RIWSLEKTPDLREVLREISEAVKRAEVIEYGPERLPAGPDVDKSDEIIIVEGRADVINLL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCHHHHHHH
RYGYRNVIALEGARGKIPETIIKLAKTKKAIAFVDGDHGGDLILWELLKVADIDYVAKAP
HHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHCCCC
PGKEVEELTGKEIARALRNLIPAREYLQILERKFKPKPAVEERPQPPQPQPPAVQPVQPT
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
LQPTVTTVEVVREAKPEKPTVQVEVETFEIPPSVIEEVKKLSGTLEAVLYDSKWNPIERV
CCCHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCEEEEEECCCCCHHHHH
SVRDVYNVLEKMEPGKVYAVAYDGIVTQRMLDIAAEKQVRLLIANRIGNIEKRPPKVGIL
HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
TFSDLT
EECCCC
>Mature Secondary Structure
MKYLIKAKIEVEGLVDRHDIIGAIFGQTENLFGEEFDLRKLQDRGRIGRVQVDIKHEGTR
CCEEEEEEEEEECCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCC
TIGEVVVPSNLDRVETALVAAMLESVEKVGPYKAQIRVYDIVDVRAQKIKRIVERAKEIL
CHHCEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
RIWSLEKTPDLREVLREISEAVKRAEVIEYGPERLPAGPDVDKSDEIIIVEGRADVINLL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCHHHHHHH
RYGYRNVIALEGARGKIPETIIKLAKTKKAIAFVDGDHGGDLILWELLKVADIDYVAKAP
HHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHCCCC
PGKEVEELTGKEIARALRNLIPAREYLQILERKFKPKPAVEERPQPPQPQPPAVQPVQPT
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
LQPTVTTVEVVREAKPEKPTVQVEVETFEIPPSVIEEVKKLSGTLEAVLYDSKWNPIERV
CCCHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCEEEEEECCCCCHHHHH
SVRDVYNVLEKMEPGKVYAVAYDGIVTQRMLDIAAEKQVRLLIANRIGNIEKRPPKVGIL
HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
TFSDLT
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA